RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 HDGFL2Q7Z4V5 671 aaPredicted RBP37.61■■■■□ 3.61
FAAP20-207ENST00000420515 PIK3C2AO00443 1686 aa37.61■■■■□ 3.61
FAAP20-207ENST00000420515 SPATA31A3Q5VYP0 1347 aa37.61■■■■□ 3.61
FAAP20-207ENST00000420515 ZNF692Q9BU19 519 aaPredicted RBP37.61■■■■□ 3.61
FAAP20-207ENST00000420515 TERF2IPQ9NYB0 399 aa37.61■■■■□ 3.61
FAAP20-207ENST00000420515 PAK3O75914 559 aaPredicted RBP37.6■■■■□ 3.61
FAAP20-207ENST00000420515 LRRC59Q96AG4 307 aaKnown RBP37.59■■■■□ 3.61
FAAP20-207ENST00000420515 MARF1Q9Y4F3 1742 aaKnown RBP37.57■■■■□ 3.61
FAAP20-207ENST00000420515 PNPLA6Q8IY17 1366 aa37.57■■■■□ 3.6
FAAP20-207ENST00000420515 COL22A1Q8NFW1 1626 aaPredicted RBP37.57■■■■□ 3.6
FAAP20-207ENST00000420515 CARD14Q9BXL6 1004 aa37.56■■■■□ 3.6
FAAP20-207ENST00000420515 EDC4Q6P2E9 1401 aaKnown RBP37.55■■■■□ 3.6
FAAP20-207ENST00000420515 CRYBG1Q9Y4K1 1723 aa37.55■■■■□ 3.6
FAAP20-207ENST00000420515 TTC21BQ7Z4L5 1316 aa37.55■■■■□ 3.6
FAAP20-207ENST00000420515 ABCA3Q99758 1704 aa37.54■■■■□ 3.6
FAAP20-207ENST00000420515 PANK3Q9H999 370 aa37.54■■■■□ 3.6
FAAP20-207ENST00000420515 LMOD2Q6P5Q4 547 aa37.53■■■■□ 3.6
FAAP20-207ENST00000420515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.52■■■■□ 3.6
FAAP20-207ENST00000420515 JCADQ9P266 1359 aa37.52■■■■□ 3.6
FAAP20-207ENST00000420515 KIF20BQ96Q89 1820 aa37.52■■■■□ 3.6
FAAP20-207ENST00000420515 NSD3Q9BZ95 1437 aa37.52■■■■□ 3.6
FAAP20-207ENST00000420515 BRD4O60885 1362 aaPredicted RBP37.51■■■■□ 3.59
FAAP20-207ENST00000420515 NUTM2GQ5VZR2 741 aa37.51■■■■□ 3.59
FAAP20-207ENST00000420515 MED1Q15648 1581 aaPredicted RBP37.48■■■■□ 3.59
FAAP20-207ENST00000420515 PLEKHG5O94827 1062 aa37.47■■■■□ 3.59
FAAP20-207ENST00000420515 PHRF1Q9P1Y6 1649 aaKnown RBP37.46■■■■□ 3.59
FAAP20-207ENST00000420515 ARHGEF10O15013 1369 aa37.46■■■■□ 3.59
FAAP20-207ENST00000420515 ZNF316A6NFI3 1004 aaPredicted RBP37.46■■■■□ 3.59
FAAP20-207ENST00000420515 NME9Q86XW9 330 aa37.46■■■■□ 3.59
FAAP20-207ENST00000420515 ABTB2Q8N961 1025 aa37.46■■■■□ 3.59
FAAP20-207ENST00000420515 ZRANB1Q9UGI0 708 aa37.46■■■■□ 3.59
FAAP20-207ENST00000420515 TTC21AQ8NDW8 1320 aa37.45■■■■□ 3.59
FAAP20-207ENST00000420515 USP54Q70EL1 1684 aa37.45■■■■□ 3.59
FAAP20-207ENST00000420515 CABLES1Q8TDN4 633 aa37.43■■■■□ 3.58
FAAP20-207ENST00000420515 LRP6O75581 1613 aa37.4■■■■□ 3.58
FAAP20-207ENST00000420515 NLRP6P59044 892 aa37.36■■■■□ 3.57
FAAP20-207ENST00000420515 ANKRD26Q9UPS8 1709 aa37.36■■■■□ 3.57
FAAP20-207ENST00000420515 OVOS2A0A0J9YW53 1432 aa37.35■■■■□ 3.57
FAAP20-207ENST00000420515 OVOS2Q6IE36 1432 aa37.35■■■■□ 3.57
FAAP20-207ENST00000420515 FYB1O15117 783 aa37.35■■■■□ 3.57
FAAP20-207ENST00000420515 PER1O15534 1290 aaPredicted RBP37.35■■■■□ 3.57
FAAP20-207ENST00000420515 SLIT3O75094 1523 aa37.34■■■■□ 3.57
FAAP20-207ENST00000420515 NUTM2BA6NNL0 878 aaPredicted RBP37.34■■■■□ 3.57
FAAP20-207ENST00000420515 NUTM2EB1AL46 878 aaPredicted RBP37.34■■■■□ 3.57
FAAP20-207ENST00000420515 NUTM2AQ8IVF1 878 aaPredicted RBP37.34■■■■□ 3.57
FAAP20-207ENST00000420515 USP19O94966 1318 aa37.34■■■■□ 3.57
FAAP20-207ENST00000420515 USP31Q70CQ4 1352 aa37.34■■■■□ 3.57
FAAP20-207ENST00000420515 DDX10Q13206 875 aaKnown RBP37.33■■■■□ 3.57
FAAP20-207ENST00000420515 GGNBP2Q9H3C7 697 aa37.33■■■■□ 3.57
FAAP20-207ENST00000420515 SPATA31A6Q5VVP1 1343 aa37.32■■■■□ 3.57
FAAP20-207ENST00000420515 NLRP13Q86W25 1043 aa37.31■■■■□ 3.56
FAAP20-207ENST00000420515 CGNL1Q0VF96 1302 aa37.28■■■■□ 3.56
FAAP20-207ENST00000420515 KNSTRNQ9Y448 316 aa37.26■■■■□ 3.56
FAAP20-207ENST00000420515 NFAT5O94916 1531 aa37.25■■■■□ 3.55
FAAP20-207ENST00000420515 AMER1Q5JTC6 1135 aaPredicted RBP37.25■■■■□ 3.55
FAAP20-207ENST00000420515 SOX12O15370 315 aa37.23■■■■□ 3.55
FAAP20-207ENST00000420515 ADAMTS2O95450 1211 aa37.22■■■■□ 3.55
FAAP20-207ENST00000420515 LTN1O94822 1766 aa37.22■■■■□ 3.55
FAAP20-207ENST00000420515 GCP02774 474 aa37.21■■■■□ 3.55
FAAP20-207ENST00000420515 HAP1P54257 671 aaPredicted RBP37.21■■■■□ 3.55
FAAP20-207ENST00000420515 COG3Q96JB2 828 aa37.21■■■■□ 3.55
FAAP20-207ENST00000420515 FBLN1P23142 703 aa37.19■■■■□ 3.54
FAAP20-207ENST00000420515 ZC3H6P61129 1189 aaKnown RBP37.17■■■■□ 3.54
FAAP20-207ENST00000420515 CNGB1Q14028 1251 aaPredicted RBP37.17■■■■□ 3.54
FAAP20-207ENST00000420515 CC2D1BQ5T0F9 858 aaKnown RBP37.15■■■■□ 3.54
FAAP20-207ENST00000420515 PLCH1Q4KWH8 1693 aa37.15■■■■□ 3.54
FAAP20-207ENST00000420515 NSD2O96028 1365 aa37.15■■■■□ 3.54
FAAP20-207ENST00000420515 KIAA0232Q92628 1395 aa37.15■■■■□ 3.54
FAAP20-207ENST00000420515 MAP2P11137 1827 aaKnown RBP37.13■■■■□ 3.53
FAAP20-207ENST00000420515 COL18A1P39060 1754 aa37.12■■■■□ 3.53
FAAP20-207ENST00000420515 RGPD5Q99666 1765 aa37.12■■■■□ 3.53
FAAP20-207ENST00000420515 COL14A1Q05707 1796 aaKnown RBP37.11■■■■□ 3.53
FAAP20-207ENST00000420515 KCNH5Q8NCM2 988 aa37.1■■■■□ 3.53
FAAP20-207ENST00000420515 MEX3CQ5U5Q3 659 aaKnown RBP37.1■■■■□ 3.53
FAAP20-207ENST00000420515 C8orf37Q96NL8 207 aa37.1■■■■□ 3.53
FAAP20-207ENST00000420515 NPC1L1Q9UHC9 1359 aa37.1■■■■□ 3.53
FAAP20-207ENST00000420515 LMO7Q8WWI1 1683 aa37.09■■■■□ 3.53
FAAP20-207ENST00000420515 CHRNA2Q15822 529 aa37.09■■■■□ 3.53
FAAP20-207ENST00000420515 CPDO75976 1380 aa37.08■■■■□ 3.53
FAAP20-207ENST00000420515 FAM83GA6ND36 823 aa37.08■■■■□ 3.53
FAAP20-207ENST00000420515 ZBTB7CA1YPR0 619 aa37.07■■■■□ 3.53
FAAP20-207ENST00000420515 TNNT2P45379 298 aaPredicted RBP37.07■■■■□ 3.53
FAAP20-207ENST00000420515 PEAK1Q9H792 1746 aa37.07■■■■□ 3.52
FAAP20-207ENST00000420515 RRS1Q15050 365 aaKnown RBP37.05■■■■□ 3.52
FAAP20-207ENST00000420515 MORC1Q86VD1 984 aa37.05■■■■□ 3.52
FAAP20-207ENST00000420515 ARHGEF25Q86VW2 580 aa37.05■■■■□ 3.52
FAAP20-207ENST00000420515 PRDM11Q9NQV5 511 aa37.05■■■■□ 3.52
FAAP20-207ENST00000420515 NRAPQ86VF7 1730 aa37.04■■■■□ 3.52
FAAP20-207ENST00000420515 NWD2Q9ULI1 1742 aa37.03■■■■□ 3.52
FAAP20-207ENST00000420515 SLIT2O94813 1529 aa37.01■■■■□ 3.52
FAAP20-207ENST00000420515 MAP3K19Q56UN5 1328 aa37.01■■■■□ 3.51
FAAP20-207ENST00000420515 CAMTA1Q9Y6Y1 1673 aa37.01■■■■□ 3.51
FAAP20-207ENST00000420515 NGLY1Q96IV0 654 aa37■■■■□ 3.51
FAAP20-207ENST00000420515 AATKQ6ZMQ8 1374 aa36.97■■■■□ 3.51
FAAP20-207ENST00000420515 EMILIN1Q9Y6C2 1016 aa36.97■■■■□ 3.51
FAAP20-207ENST00000420515 AFF2P51816 1311 aa36.97■■■■□ 3.51
FAAP20-207ENST00000420515 AXIN2Q9Y2T1 843 aa36.96■■■■□ 3.51
FAAP20-207ENST00000420515 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.96■■■■□ 3.51
FAAP20-207ENST00000420515 BCL9LQ86UU0 1499 aa36.95■■■■□ 3.51
FAAP20-207ENST00000420515 BTG4Q9NY30 223 aa36.95■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms