RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 SPON1Q9HCB6 807 aa6.86□□□□□ -1.31
CNGA1-203ENST00000420489 BRWD3Q6RI45 1802 aa6.86□□□□□ -1.31
CNGA1-203ENST00000420489 FMN1Q68DA7 1419 aa6.86□□□□□ -1.31
CNGA1-203ENST00000420489 ARID3CA6NKF2 412 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 WDR90Q96KV7 1748 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 CAMTA1Q9Y6Y1 1673 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 NUP153P49790 1475 aaKnown RBP6.85□□□□□ -1.31
CNGA1-203ENST00000420489 ZNF316A6NFI3 1004 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-203ENST00000420489 PTGER2P43116 358 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 ZNF687Q8N1G0 1237 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 PCDHGA4Q9Y5G9 962 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 TET3O43151 1660 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 NUP188Q5SRE5 1749 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 ASXL1Q8IXJ9 1541 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 SYCP2Q9BX26 1530 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 GTPBP6O43824 516 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-203ENST00000420489 DNAJC5GQ8N7S2 189 aa6.85□□□□□ -1.31
CNGA1-203ENST00000420489 USP32Q8NFA0 1604 aa6.84□□□□□ -1.31
CNGA1-203ENST00000420489 PNPLA6Q8IY17 1366 aa6.84□□□□□ -1.31
CNGA1-203ENST00000420489 PBX2P40425 430 aa6.84□□□□□ -1.31
CNGA1-203ENST00000420489 ARSIQ5FYB1 569 aa6.84□□□□□ -1.31
CNGA1-203ENST00000420489 PTCD2Q8WV60 388 aaKnown RBP6.84□□□□□ -1.31
CNGA1-203ENST00000420489 PLEKHD1A6NEE1 506 aa6.84□□□□□ -1.32
CNGA1-203ENST00000420489 KCNQ2O43526 872 aa6.84□□□□□ -1.32
CNGA1-203ENST00000420489 ONECUT3O60422 494 aaPredicted RBP6.84□□□□□ -1.32
CNGA1-203ENST00000420489 PLPP6Q8IY26 295 aa6.84□□□□□ -1.32
CNGA1-203ENST00000420489 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.84□□□□□ -1.32
CNGA1-203ENST00000420489 LRRC59Q96AG4 307 aaKnown RBP6.83□□□□□ -1.32
CNGA1-203ENST00000420489 WWC3Q9ULE0 1092 aa6.82□□□□□ -1.32
CNGA1-203ENST00000420489 PPP1R15AO75807 674 aaPredicted RBP6.82□□□□□ -1.32
CNGA1-203ENST00000420489 VARS2Q5ST30 1063 aaKnown RBP6.82□□□□□ -1.32
CNGA1-203ENST00000420489 COL13A1Q5TAT6 717 aaPredicted RBP6.82□□□□□ -1.32
CNGA1-203ENST00000420489 CRISPLD2Q9H0B8 497 aa6.82□□□□□ -1.32
CNGA1-203ENST00000420489 A2MP01023 1474 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 ADGRB3O60242 1522 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 PREX2Q70Z35 1606 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 NWD2Q9ULI1 1742 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 GLI3P10071 1580 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 TMEM131LA2VDJ0 1609 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 CHD2O14647 1828 aaKnown RBP6.81□□□□□ -1.32
CNGA1-203ENST00000420489 COL24A1Q17RW2 1714 aa6.81□□□□□ -1.32
CNGA1-203ENST00000420489 PIK3R4Q99570 1358 aa6.8□□□□□ -1.32
CNGA1-203ENST00000420489 FYCO1Q9BQS8 1478 aa6.79□□□□□ -1.32
CNGA1-203ENST00000420489 SPNS2Q8IVW8 549 aa6.79□□□□□ -1.32
CNGA1-203ENST00000420489 NCOA2Q15596 1464 aa6.79□□□□□ -1.32
CNGA1-203ENST00000420489 PPP1R15BQ5SWA1 713 aa6.79□□□□□ -1.32
CNGA1-203ENST00000420489 CADPS2Q86UW7 1296 aa6.79□□□□□ -1.32
CNGA1-203ENST00000420489 DSG2Q14126 1118 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 NRKQ7Z2Y5 1582 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-203ENST00000420489 POTEB3A0JP26 581 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 MFSD10Q14728 455 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 POTEBQ6S5H4 581 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 PRDM10Q9NQV6 1147 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 PPP1R1BQ9UD71 204 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-203ENST00000420489 USP21Q9UK80 565 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 C10orf71Q711Q0 1435 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 C11orf95C9JLR9 678 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-203ENST00000420489 KLRG1Q96E93 195 aa6.78□□□□□ -1.32
CNGA1-203ENST00000420489 ADCY9O60503 1353 aa6.77□□□□□ -1.33
CNGA1-203ENST00000420489 NBPF8Q3BBV2 869 aa6.77□□□□□ -1.33
CNGA1-203ENST00000420489 NBPF14Q5TI25 921 aa6.77□□□□□ -1.33
CNGA1-203ENST00000420489 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
CNGA1-203ENST00000420489 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
CNGA1-203ENST00000420489 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
CNGA1-203ENST00000420489 KIAA1107Q9UPP5 1409 aa6.77□□□□□ -1.33
CNGA1-203ENST00000420489 MAST1Q9Y2H9 1570 aa6.76□□□□□ -1.33
CNGA1-203ENST00000420489 NUDT7P0C024 238 aa6.76□□□□□ -1.33
CNGA1-203ENST00000420489 PPP4R3BQ5MIZ7 849 aa6.76□□□□□ -1.33
CNGA1-203ENST00000420489 SPRYD3Q8NCJ5 442 aa6.76□□□□□ -1.33
CNGA1-203ENST00000420489 DDX27Q96GQ7 796 aaKnown RBP6.76□□□□□ -1.33
CNGA1-203ENST00000420489 OXER1Q8TDS5 423 aa6.76□□□□□ -1.33
CNGA1-203ENST00000420489 MYOM2P54296 1465 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 SLIT2O94813 1529 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 MLLT1Q03111 559 aaPredicted RBP6.75□□□□□ -1.33
CNGA1-203ENST00000420489 GCC1Q96CN9 775 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 LHX6Q9UPM6 363 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 MYOM1P52179 1685 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 ARHGAP5Q13017 1502 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 MMRN1Q13201 1228 aa6.75□□□□□ -1.33
CNGA1-203ENST00000420489 EFCAB6Q5THR3 1501 aa6.74□□□□□ -1.33
CNGA1-203ENST00000420489 CDC42BPBQ9Y5S2 1711 aa6.74□□□□□ -1.33
CNGA1-203ENST00000420489 LARP6Q9BRS8 491 aaKnown RBP6.74□□□□□ -1.33
CNGA1-203ENST00000420489 SLC24A1O60721 1099 aa6.73□□□□□ -1.33
CNGA1-203ENST00000420489 R3HDM1Q15032 1099 aaKnown RBP6.73□□□□□ -1.33
CNGA1-203ENST00000420489 DEFB132Q7Z7B7 95 aa6.73□□□□□ -1.33
CNGA1-203ENST00000420489 TTBK1Q5TCY1 1321 aaPredicted RBP6.73□□□□□ -1.33
CNGA1-203ENST00000420489 ARHGEF28Q8N1W1 1705 aaKnown RBP6.73□□□□□ -1.33
CNGA1-203ENST00000420489 KHSRPQ92945 711 aaKnown RBP eCLIP6.73□□□□□ -1.33
CNGA1-203ENST00000420489 PROSER2Q86WR7 435 aaPredicted RBP6.72□□□□□ -1.33
CNGA1-203ENST00000420489 ERVK-7P63135 1459 aa6.72□□□□□ -1.33
CNGA1-203ENST00000420489 ARHGAP33O14559 1287 aa6.72□□□□□ -1.33
CNGA1-203ENST00000420489 CAMKK2Q96RR4 588 aa6.71□□□□□ -1.33
CNGA1-203ENST00000420489 RTN4Q9NQC3 1192 aaKnown RBP6.71□□□□□ -1.33
CNGA1-203ENST00000420489 ARHGAP31Q2M1Z3 1444 aa6.71□□□□□ -1.34
CNGA1-203ENST00000420489 TK2O00142 265 aa6.71□□□□□ -1.34
CNGA1-203ENST00000420489 C8orf37Q96NL8 207 aa6.71□□□□□ -1.34
CNGA1-203ENST00000420489 EID1Q9Y6B2 187 aa6.71□□□□□ -1.34
CNGA1-203ENST00000420489 USP19O94966 1318 aa6.71□□□□□ -1.34
CNGA1-203ENST00000420489 GRIN3BO60391 1043 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms