RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
LINC00993-201ENST00000420453 PCDHGC3Q9UN70 934 aa8.36□□□□□ -1.07
LINC00993-201ENST00000420453 NDUFV2P19404 249 aa8.35□□□□□ -1.07
LINC00993-201ENST00000420453 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
LINC00993-201ENST00000420453 DIXDC1Q155Q3 683 aa8.35□□□□□ -1.07
LINC00993-201ENST00000420453 MYSM1Q5VVJ2 828 aa8.35□□□□□ -1.07
LINC00993-201ENST00000420453 TBC1D2Q9BYX2 928 aa8.35□□□□□ -1.07
LINC00993-201ENST00000420453 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
LINC00993-201ENST00000420453 SMPD1P17405 629 aa8.34□□□□□ -1.07
LINC00993-201ENST00000420453 SPDYE5A6NIY4 337 aa8.33□□□□□ -1.08
LINC00993-201ENST00000420453 SKOR1P84550 965 aa8.33□□□□□ -1.08
LINC00993-201ENST00000420453 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
LINC00993-201ENST00000420453 LAMC3Q9Y6N6 1575 aa8.33□□□□□ -1.08
LINC00993-201ENST00000420453 J3QL48 77 aa8.32□□□□□ -1.08
LINC00993-201ENST00000420453 CCNYL3P0C7X3 344 aa8.32□□□□□ -1.08
LINC00993-201ENST00000420453 MTMR2Q13614 643 aa8.32□□□□□ -1.08
LINC00993-201ENST00000420453 SKIV2LQ15477 1246 aaKnown RBP8.32□□□□□ -1.08
LINC00993-201ENST00000420453 SH3D19Q5HYK7 790 aa8.32□□□□□ -1.08
LINC00993-201ENST00000420453 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
LINC00993-201ENST00000420453 DACH1Q9UI36 760 aa8.32□□□□□ -1.08
LINC00993-201ENST00000420453 C11orf95C9JLR9 678 aaPredicted RBP8.31□□□□□ -1.08
LINC00993-201ENST00000420453 PTPRNQ16849 979 aa8.31□□□□□ -1.08
LINC00993-201ENST00000420453 PTCRAQ6ISU1 281 aaPredicted RBP8.31□□□□□ -1.08
LINC00993-201ENST00000420453 EHBP1Q8NDI1 1231 aa8.31□□□□□ -1.08
LINC00993-201ENST00000420453 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
LINC00993-201ENST00000420453 GJA5P36382 358 aa8.3□□□□□ -1.08
LINC00993-201ENST00000420453 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
LINC00993-201ENST00000420453 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
LINC00993-201ENST00000420453 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
LINC00993-201ENST00000420453 DESI1Q6ICB0 168 aa8.29□□□□□ -1.08
LINC00993-201ENST00000420453 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
LINC00993-201ENST00000420453 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
LINC00993-201ENST00000420453 RSBN1LQ6PCB5 846 aaPredicted RBP8.28□□□□□ -1.08
LINC00993-201ENST00000420453 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
LINC00993-201ENST00000420453 HPS1Q92902 700 aa8.28□□□□□ -1.08
LINC00993-201ENST00000420453 PCMTD1Q96MG8 357 aaPredicted RBP8.28□□□□□ -1.08
LINC00993-201ENST00000420453 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC00993-201ENST00000420453 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
LINC00993-201ENST00000420453 NESP48681 1621 aa8.28□□□□□ -1.08
LINC00993-201ENST00000420453 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
LINC00993-201ENST00000420453 CSPP1Q1MSJ5 1256 aa8.27□□□□□ -1.09
LINC00993-201ENST00000420453 RSPH6AQ9H0K4 717 aa8.27□□□□□ -1.09
LINC00993-201ENST00000420453 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
LINC00993-201ENST00000420453 ATP1B4Q9UN42 357 aaPredicted RBP8.27□□□□□ -1.09
LINC00993-201ENST00000420453 WASF2Q9Y6W5 498 aa8.27□□□□□ -1.09
LINC00993-201ENST00000420453 SH3BP2P78314 561 aa8.26□□□□□ -1.09
LINC00993-201ENST00000420453 ZBTB3Q9H5J0 574 aa8.26□□□□□ -1.09
LINC00993-201ENST00000420453 SENP2Q9HC62 589 aa8.26□□□□□ -1.09
LINC00993-201ENST00000420453 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
LINC00993-201ENST00000420453 SPTLC1O15269 473 aa8.25□□□□□ -1.09
LINC00993-201ENST00000420453 CTHP32929 405 aa8.25□□□□□ -1.09
LINC00993-201ENST00000420453 CLK2P49760 499 aaKnown RBP8.25□□□□□ -1.09
LINC00993-201ENST00000420453 QPCTQ16769 361 aa8.25□□□□□ -1.09
LINC00993-201ENST00000420453 C14orf37Q86TY3 774 aa8.25□□□□□ -1.09
LINC00993-201ENST00000420453 SIAH2O43255 324 aa8.24□□□□□ -1.09
LINC00993-201ENST00000420453 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
LINC00993-201ENST00000420453 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
LINC00993-201ENST00000420453 BAP1Q92560 729 aa8.24□□□□□ -1.09
LINC00993-201ENST00000420453 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
LINC00993-201ENST00000420453 HRCP23327 699 aa8.23□□□□□ -1.09
LINC00993-201ENST00000420453 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
LINC00993-201ENST00000420453 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
LINC00993-201ENST00000420453 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
LINC00993-201ENST00000420453 CABLES1Q8TDN4 633 aa8.23□□□□□ -1.09
LINC00993-201ENST00000420453 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
LINC00993-201ENST00000420453 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
LINC00993-201ENST00000420453 VARSP26640 1264 aaKnown RBP8.22□□□□□ -1.09
LINC00993-201ENST00000420453 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
LINC00993-201ENST00000420453 NUTM2BA6NNL0 878 aaPredicted RBP8.21□□□□□ -1.1
LINC00993-201ENST00000420453 NUTM2EB1AL46 878 aaPredicted RBP8.21□□□□□ -1.1
LINC00993-201ENST00000420453 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.1
LINC00993-201ENST00000420453 NUTM2AQ8IVF1 878 aaPredicted RBP8.21□□□□□ -1.1
LINC00993-201ENST00000420453 TRIM47Q96LD4 638 aa8.21□□□□□ -1.1
LINC00993-201ENST00000420453 WRNQ14191 1432 aaPredicted RBP eCLIP8.2□□□□□ -1.1
LINC00993-201ENST00000420453 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
LINC00993-201ENST00000420453 WFS1O76024 890 aa8.2□□□□□ -1.1
LINC00993-201ENST00000420453 CAPN5O15484 640 aaPredicted RBP8.19□□□□□ -1.1
LINC00993-201ENST00000420453 LILRB3O75022 631 aa8.19□□□□□ -1.1
LINC00993-201ENST00000420453 SNRPBP14678 240 aaKnown RBP8.19□□□□□ -1.1
LINC00993-201ENST00000420453 RFC5P40937 340 aa8.19□□□□□ -1.1
LINC00993-201ENST00000420453 TSC1Q92574 1164 aa8.19□□□□□ -1.1
LINC00993-201ENST00000420453 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
LINC00993-201ENST00000420453 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
LINC00993-201ENST00000420453 FAM174AQ8TBP5 190 aa8.18□□□□□ -1.1
LINC00993-201ENST00000420453 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
LINC00993-201ENST00000420453 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
LINC00993-201ENST00000420453 MPNDQ8N594 471 aa8.17□□□□□ -1.1
LINC00993-201ENST00000420453 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
LINC00993-201ENST00000420453 AGERQ15109 404 aa8.16□□□□□ -1.1
LINC00993-201ENST00000420453 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
LINC00993-201ENST00000420453 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
LINC00993-201ENST00000420453 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
LINC00993-201ENST00000420453 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
LINC00993-201ENST00000420453 CUX1P39880 1505 aa8.15□□□□□ -1.1
LINC00993-201ENST00000420453 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
LINC00993-201ENST00000420453 ARMC2Q8NEN0 867 aa8.15□□□□□ -1.1
LINC00993-201ENST00000420453 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
LINC00993-201ENST00000420453 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.1
LINC00993-201ENST00000420453 KIF21AQ7Z4S6 1674 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 TOP2BQ02880 1626 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms