RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 ONECUT3O60422 494 aaPredicted RBP31.51■■■□□ 2.63
ACTB-203ENST00000417101 CCDC61Q9Y6R9 512 aa31.5■■■□□ 2.63
ACTB-203ENST00000417101 SRCAPQ6ZRS2 3230 aa31.5■■■□□ 2.63
ACTB-203ENST00000417101 BRWD3Q6RI45 1802 aa31.49■■■□□ 2.63
ACTB-203ENST00000417101 COL14A1Q05707 1796 aaKnown RBP31.48■■■□□ 2.63
ACTB-203ENST00000417101 ACEP12821 1306 aa31.48■■■□□ 2.63
ACTB-203ENST00000417101 NRAPQ86VF7 1730 aa31.46■■■□□ 2.63
ACTB-203ENST00000417101 POLR3AO14802 1390 aaPredicted RBP31.46■■■□□ 2.63
ACTB-203ENST00000417101 A0A0G2JS52 829 aa31.46■■■□□ 2.63
ACTB-203ENST00000417101 MYT1Q01538 1121 aa31.46■■■□□ 2.63
ACTB-203ENST00000417101 NBPF8Q3BBV2 869 aa31.46■■■□□ 2.63
ACTB-203ENST00000417101 L3MBTL2Q969R5 705 aa31.46■■■□□ 2.63
ACTB-203ENST00000417101 PRDM11Q9NQV5 511 aa31.46■■■□□ 2.63
ACTB-203ENST00000417101 BLMP54132 1417 aaPredicted RBP31.45■■■□□ 2.63
ACTB-203ENST00000417101 FAM98CQ17RN3 349 aaKnown RBP31.45■■■□□ 2.63
ACTB-203ENST00000417101 KRT27Q7Z3Y8 459 aa31.45■■■□□ 2.63
ACTB-203ENST00000417101 CRYBG1Q9Y4K1 1723 aa31.45■■■□□ 2.63
ACTB-203ENST00000417101 CENPJQ9HC77 1338 aaPredicted RBP31.45■■■□□ 2.62
ACTB-203ENST00000417101 PLEKHG3A1L390 1219 aa31.44■■■□□ 2.62
ACTB-203ENST00000417101 NUTM2GQ5VZR2 741 aa31.44■■■□□ 2.62
ACTB-203ENST00000417101 ZRANB1Q9UGI0 708 aa31.44■■■□□ 2.62
ACTB-203ENST00000417101 TOPAZ1Q8N9V7 1692 aa31.43■■■□□ 2.62
ACTB-203ENST00000417101 SRPK2P78362 688 aaKnown RBP31.42■■■□□ 2.62
ACTB-203ENST00000417101 SIN3AQ96ST3 1273 aa31.42■■■□□ 2.62
ACTB-203ENST00000417101 KIAA0232Q92628 1395 aa31.41■■■□□ 2.62
ACTB-203ENST00000417101 SPATA31A5Q5VU36 1347 aa31.39■■■□□ 2.62
ACTB-203ENST00000417101 SPATA31A7Q8IWB4 1347 aa31.39■■■□□ 2.62
ACTB-203ENST00000417101 ZC3H6P61129 1189 aaKnown RBP31.38■■■□□ 2.61
ACTB-203ENST00000417101 CHRNA2Q15822 529 aa31.38■■■□□ 2.61
ACTB-203ENST00000417101 CABP2Q9NPB3 220 aa31.38■■■□□ 2.61
ACTB-203ENST00000417101 SF3B2Q13435 895 aaKnown RBP31.37■■■□□ 2.61
ACTB-203ENST00000417101 DEFB132Q7Z7B7 95 aa31.37■■■□□ 2.61
ACTB-203ENST00000417101 PPIP5K1Q6PFW1 1433 aa31.36■■■□□ 2.61
ACTB-203ENST00000417101 NEUROD1Q13562 356 aa31.36■■■□□ 2.61
ACTB-203ENST00000417101 ABTB2Q8N961 1025 aa31.35■■■□□ 2.61
ACTB-203ENST00000417101 PHRF1Q9P1Y6 1649 aaKnown RBP31.35■■■□□ 2.61
ACTB-203ENST00000417101 STRN4Q9NRL3 753 aa31.32■■■□□ 2.6
ACTB-203ENST00000417101 QRICH2Q9H0J4 1663 aa31.32■■■□□ 2.6
ACTB-203ENST00000417101 SPATA31A1Q5TZJ5 1347 aa31.28■■■□□ 2.6
ACTB-203ENST00000417101 CABP1Q9NZU7 370 aa31.28■■■□□ 2.6
ACTB-203ENST00000417101 USP19O94966 1318 aa31.27■■■□□ 2.6
ACTB-203ENST00000417101 FAM182BQ5T319 152 aa31.27■■■□□ 2.6
ACTB-203ENST00000417101 NLRP13Q86W25 1043 aa31.26■■■□□ 2.59
ACTB-203ENST00000417101 TRPM1Q7Z4N2 1603 aa31.26■■■□□ 2.59
ACTB-203ENST00000417101 NRKQ7Z2Y5 1582 aa31.26■■■□□ 2.59
ACTB-203ENST00000417101 ROCK2O75116 1388 aaKnown RBP31.25■■■□□ 2.59
ACTB-203ENST00000417101 EVA1CP58658 441 aa31.24■■■□□ 2.59
ACTB-203ENST00000417101 EVC2Q86UK5 1308 aa31.24■■■□□ 2.59
ACTB-203ENST00000417101 THSD7AQ9UPZ6 1657 aa31.23■■■□□ 2.59
ACTB-203ENST00000417101 BRD4O60885 1362 aaPredicted RBP31.23■■■□□ 2.59
ACTB-203ENST00000417101 CPDO75976 1380 aa31.22■■■□□ 2.59
ACTB-203ENST00000417101 GCP02774 474 aa31.22■■■□□ 2.59
ACTB-203ENST00000417101 BAG6P46379 1132 aa31.21■■■□□ 2.59
ACTB-203ENST00000417101 USP35Q9P2H5 1018 aa31.21■■■□□ 2.59
ACTB-203ENST00000417101 USP6P35125 1406 aa31.21■■■□□ 2.59
ACTB-203ENST00000417101 SSH2Q76I76 1423 aa31.21■■■□□ 2.59
ACTB-203ENST00000417101 CAMTA1Q9Y6Y1 1673 aa31.19■■■□□ 2.58
ACTB-203ENST00000417101 NLRP6P59044 892 aa31.18■■■□□ 2.58
ACTB-203ENST00000417101 LARP1Q6PKG0 1096 aaKnown RBP31.18■■■□□ 2.58
ACTB-203ENST00000417101 LMO7Q8WWI1 1683 aa31.14■■■□□ 2.58
ACTB-203ENST00000417101 BARGINQ6ZT62 677 aa31.14■■■□□ 2.58
ACTB-203ENST00000417101 ZBTB7CA1YPR0 619 aa31.13■■■□□ 2.57
ACTB-203ENST00000417101 EN1Q05925 392 aaPredicted RBP31.13■■■□□ 2.57
ACTB-203ENST00000417101 TCP11L2Q8N4U5 519 aa31.11■■■□□ 2.57
ACTB-203ENST00000417101 RGPD1P0DJD0 1748 aa31.1■■■□□ 2.57
ACTB-203ENST00000417101 FAM196AQ6ZSG2 479 aa31.1■■■□□ 2.57
ACTB-203ENST00000417101 PDE3BQ13370 1112 aa31.08■■■□□ 2.57
ACTB-203ENST00000417101 ZNF692Q9BU19 519 aaPredicted RBP31.08■■■□□ 2.57
ACTB-203ENST00000417101 SLIT3O75094 1523 aa31.08■■■□□ 2.57
ACTB-203ENST00000417101 COL5A2P05997 1499 aaPredicted RBP31.08■■■□□ 2.57
ACTB-203ENST00000417101 TTC21BQ7Z4L5 1316 aa31.06■■■□□ 2.56
ACTB-203ENST00000417101 TRIM37O94972 964 aa31.06■■■□□ 2.56
ACTB-203ENST00000417101 PIK3C2AO00443 1686 aa31.06■■■□□ 2.56
ACTB-203ENST00000417101 AATKQ6ZMQ8 1374 aa31.05■■■□□ 2.56
ACTB-203ENST00000417101 PSDA5PKW4 1024 aaPredicted RBP31.05■■■□□ 2.56
ACTB-203ENST00000417101 CARD11Q9BXL7 1154 aa31.05■■■□□ 2.56
ACTB-203ENST00000417101 THRAP3Q9Y2W1 955 aaKnown RBP31.05■■■□□ 2.56
ACTB-203ENST00000417101 DISP2A7MBM2 1401 aa31.04■■■□□ 2.56
ACTB-203ENST00000417101 TNS1Q9HBL0 1735 aaKnown RBP31.02■■■□□ 2.56
ACTB-203ENST00000417101 CRB1P82279 1406 aa31.01■■■□□ 2.55
ACTB-203ENST00000417101 TONSLQ96HA7 1378 aa31.01■■■□□ 2.55
ACTB-203ENST00000417101 CPSF1Q10570 1443 aaKnown RBP31■■■□□ 2.55
ACTB-203ENST00000417101 EZH2Q15910 746 aaKnown RBP31■■■□□ 2.55
ACTB-203ENST00000417101 KTN1Q86UP2 1357 aaKnown RBP31■■■□□ 2.55
ACTB-203ENST00000417101 SBNO2Q9Y2G9 1366 aa31■■■□□ 2.55
ACTB-203ENST00000417101 TTC21AQ8NDW8 1320 aa30.99■■■□□ 2.55
ACTB-203ENST00000417101 SOX12O15370 315 aa30.99■■■□□ 2.55
ACTB-203ENST00000417101 AKAP12Q02952 1782 aa30.98■■■□□ 2.55
ACTB-203ENST00000417101 APBA3O96018 575 aa30.98■■■□□ 2.55
ACTB-203ENST00000417101 KCNH5Q8NCM2 988 aa30.97■■■□□ 2.55
ACTB-203ENST00000417101 CAMKK2Q96RR4 588 aa30.97■■■□□ 2.55
ACTB-203ENST00000417101 AXIN2Q9Y2T1 843 aa30.97■■■□□ 2.55
ACTB-203ENST00000417101 TOM1L2Q6ZVM7 507 aa30.96■■■□□ 2.55
ACTB-203ENST00000417101 ARHGEF25Q86VW2 580 aa30.96■■■□□ 2.55
ACTB-203ENST00000417101 R3HDM1Q15032 1099 aaKnown RBP30.94■■■□□ 2.54
ACTB-203ENST00000417101 COL18A1P39060 1754 aa30.94■■■□□ 2.54
ACTB-203ENST00000417101 PARP4Q9UKK3 1724 aaKnown RBP30.92■■■□□ 2.54
ACTB-203ENST00000417101 WDR17Q8IZU2 1322 aa30.92■■■□□ 2.54
ACTB-203ENST00000417101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.91■■■□□ 2.54
ACTB-203ENST00000417101 TMC1Q8TDI8 760 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms