RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 WWC1Q8IX03 1113 aa14.43□□□□□ -0.1
TRAPPC12-205ENST00000416918 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
TRAPPC12-205ENST00000416918 TTC21AQ8NDW8 1320 aa14.42□□□□□ -0.1
TRAPPC12-205ENST00000416918 AAMPQ13685 434 aa14.42□□□□□ -0.1
TRAPPC12-205ENST00000416918 TCP11L2Q8N4U5 519 aa14.42□□□□□ -0.1
TRAPPC12-205ENST00000416918 NKTRP30414 1462 aaKnown RBP14.42□□□□□ -0.1
TRAPPC12-205ENST00000416918 IL16Q14005 1332 aa14.41□□□□□ -0.1
TRAPPC12-205ENST00000416918 CCDC136Q96JN2 1154 aa14.41□□□□□ -0.1
TRAPPC12-205ENST00000416918 SLC26A8Q96RN1 970 aa14.41□□□□□ -0.1
TRAPPC12-205ENST00000416918 ADAMTSL3P82987 1691 aa14.41□□□□□ -0.1
TRAPPC12-205ENST00000416918 MAPK8IP3Q9UPT6 1336 aa14.41□□□□□ -0.1
TRAPPC12-205ENST00000416918 CALD1Q05682 793 aaKnown RBP14.4□□□□□ -0.1
TRAPPC12-205ENST00000416918 CCDC146Q8IYE0 955 aa14.4□□□□□ -0.1
TRAPPC12-205ENST00000416918 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC12-205ENST00000416918 PTPRUQ92729 1446 aa14.4□□□□□ -0.1
TRAPPC12-205ENST00000416918 IRX6P78412 446 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC12-205ENST00000416918 POLKQ9UBT6 870 aa14.39□□□□□ -0.11
TRAPPC12-205ENST00000416918 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC12-205ENST00000416918 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
TRAPPC12-205ENST00000416918 KIF20BQ96Q89 1820 aa14.38□□□□□ -0.11
TRAPPC12-205ENST00000416918 COL3A1P02461 1466 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-205ENST00000416918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRAPPC12-205ENST00000416918 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
TRAPPC12-205ENST00000416918 CDK12Q9NYV4 1490 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-205ENST00000416918 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
TRAPPC12-205ENST00000416918 PRR36Q9H6K5 1346 aa14.37□□□□□ -0.11
TRAPPC12-205ENST00000416918 U2SURPO15042 1029 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-205ENST00000416918 MS4A1P11836 297 aa14.36□□□□□ -0.11
TRAPPC12-205ENST00000416918 PDE3AQ14432 1141 aa14.36□□□□□ -0.11
TRAPPC12-205ENST00000416918 PLEKHF1Q96S99 279 aa14.36□□□□□ -0.11
TRAPPC12-205ENST00000416918 ACEP12821 1306 aa14.36□□□□□ -0.11
TRAPPC12-205ENST00000416918 MON2Q7Z3U7 1717 aa14.35□□□□□ -0.11
TRAPPC12-205ENST00000416918 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-205ENST00000416918 USP6P35125 1406 aa14.35□□□□□ -0.11
TRAPPC12-205ENST00000416918 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
TRAPPC12-205ENST00000416918 ZNF428Q96B54 188 aa14.35□□□□□ -0.11
TRAPPC12-205ENST00000416918 RIMS1Q86UR5 1692 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-205ENST00000416918 KIF24Q5T7B8 1368 aa14.34□□□□□ -0.11
TRAPPC12-205ENST00000416918 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
TRAPPC12-205ENST00000416918 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-205ENST00000416918 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-205ENST00000416918 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
TRAPPC12-205ENST00000416918 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
TRAPPC12-205ENST00000416918 TOPAZ1Q8N9V7 1692 aa14.33□□□□□ -0.12
TRAPPC12-205ENST00000416918 SSH2Q76I76 1423 aa14.32□□□□□ -0.12
TRAPPC12-205ENST00000416918 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
TRAPPC12-205ENST00000416918 NME9Q86XW9 330 aa14.32□□□□□ -0.12
TRAPPC12-205ENST00000416918 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
TRAPPC12-205ENST00000416918 TSHZ2Q9NRE2 1034 aa14.32□□□□□ -0.12
TRAPPC12-205ENST00000416918 KCNA6P17658 529 aa14.31□□□□□ -0.12
TRAPPC12-205ENST00000416918 IL13P35225 146 aa14.31□□□□□ -0.12
TRAPPC12-205ENST00000416918 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
TRAPPC12-205ENST00000416918 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC12-205ENST00000416918 OVOS2A0A0J9YW53 1432 aa14.3□□□□□ -0.12
TRAPPC12-205ENST00000416918 OVOS2Q6IE36 1432 aa14.3□□□□□ -0.12
TRAPPC12-205ENST00000416918 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
TRAPPC12-205ENST00000416918 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC12-205ENST00000416918 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
TRAPPC12-205ENST00000416918 LRRC7Q96NW7 1537 aa14.29□□□□□ -0.12
TRAPPC12-205ENST00000416918 RIPK4P57078 832 aa14.28□□□□□ -0.12
TRAPPC12-205ENST00000416918 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
TRAPPC12-205ENST00000416918 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
TRAPPC12-205ENST00000416918 PPM1GO15355 546 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC12-205ENST00000416918 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
TRAPPC12-205ENST00000416918 NCOA3Q9Y6Q9 1424 aa14.26□□□□□ -0.13
TRAPPC12-205ENST00000416918 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC12-205ENST00000416918 NRKQ7Z2Y5 1582 aa14.26□□□□□ -0.13
TRAPPC12-205ENST00000416918 ADGRL3Q9HAR2 1447 aa14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 TCERG1O14776 1098 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 RRP7AQ9Y3A4 280 aaKnown RBP14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 EMILIN1Q9Y6C2 1016 aa14.25□□□□□ -0.13
TRAPPC12-205ENST00000416918 SBNO1A3KN83 1393 aa14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 NCKAP5LQ9HCH0 1330 aa14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 IPO8O15397 1037 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 GNAI1P63096 354 aa14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 CENPQQ7L2Z9 268 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 PHF8Q9UPP1 1060 aa14.24□□□□□ -0.13
TRAPPC12-205ENST00000416918 CANXP27824 592 aaKnown RBP14.23□□□□□ -0.13
TRAPPC12-205ENST00000416918 BRPF1P55201 1214 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC12-205ENST00000416918 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
TRAPPC12-205ENST00000416918 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
TRAPPC12-205ENST00000416918 IFT57Q9NWB7 429 aa14.23□□□□□ -0.13
TRAPPC12-205ENST00000416918 FLT4P35916 1363 aa14.22□□□□□ -0.13
TRAPPC12-205ENST00000416918 MAP2P11137 1827 aaKnown RBP14.22□□□□□ -0.13
TRAPPC12-205ENST00000416918 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
TRAPPC12-205ENST00000416918 ARHGEF10O15013 1369 aa14.22□□□□□ -0.13
TRAPPC12-205ENST00000416918 PLIN1O60240 522 aa14.21□□□□□ -0.13
TRAPPC12-205ENST00000416918 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.13
TRAPPC12-205ENST00000416918 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.13
TRAPPC12-205ENST00000416918 RTL1A6NKG5 1358 aa14.21□□□□□ -0.14
TRAPPC12-205ENST00000416918 FANCIQ9NVI1 1328 aa14.2□□□□□ -0.14
TRAPPC12-205ENST00000416918 HTATSF1O43719 755 aaKnown RBP14.2□□□□□ -0.14
TRAPPC12-205ENST00000416918 NLRP6P59044 892 aa14.2□□□□□ -0.14
TRAPPC12-205ENST00000416918 PMFBP1Q8TBY8 1022 aa14.2□□□□□ -0.14
TRAPPC12-205ENST00000416918 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms