RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
LINC00343-202ENST00000415294 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
LINC00343-202ENST00000415294 A0A0G2JS52 829 aa11.97□□□□□ -0.49
LINC00343-202ENST00000415294 F12P00748 615 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-202ENST00000415294 PDIA4P13667 645 aaKnown RBP11.97□□□□□ -0.49
LINC00343-202ENST00000415294 VAC14Q08AM6 782 aa11.96□□□□□ -0.49
LINC00343-202ENST00000415294 ALG2Q9H553 416 aa11.96□□□□□ -0.49
LINC00343-202ENST00000415294 ITGBL1O95965 494 aaPredicted RBP11.95□□□□□ -0.5
LINC00343-202ENST00000415294 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00343-202ENST00000415294 SPSB2Q99619 263 aa11.95□□□□□ -0.5
LINC00343-202ENST00000415294 FKBPLQ9UIM3 349 aa11.95□□□□□ -0.5
LINC00343-202ENST00000415294 DXOO77932 396 aaKnown RBP11.94□□□□□ -0.5
LINC00343-202ENST00000415294 ARMC2Q8NEN0 867 aa11.94□□□□□ -0.5
LINC00343-202ENST00000415294 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
LINC00343-202ENST00000415294 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
LINC00343-202ENST00000415294 MMP16P51512 607 aa11.93□□□□□ -0.5
LINC00343-202ENST00000415294 NR1H3Q13133 447 aa11.93□□□□□ -0.5
LINC00343-202ENST00000415294 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.5
LINC00343-202ENST00000415294 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
LINC00343-202ENST00000415294 PDE4CQ08493 712 aa11.92□□□□□ -0.5
LINC00343-202ENST00000415294 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
LINC00343-202ENST00000415294 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
LINC00343-202ENST00000415294 EVA1BQ9NVM1 165 aa11.91□□□□□ -0.5
LINC00343-202ENST00000415294 GPSM3Q9Y4H4 160 aa11.91□□□□□ -0.5
LINC00343-202ENST00000415294 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
LINC00343-202ENST00000415294 RGS20O76081 388 aa11.9□□□□□ -0.5
LINC00343-202ENST00000415294 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 ZPR1O75312 459 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 ADH1BP00325 375 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 COPS2P61201 443 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 KCNC4Q03721 635 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
LINC00343-202ENST00000415294 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 NUDT12Q9BQG2 462 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
LINC00343-202ENST00000415294 CTHP32929 405 aa11.88□□□□□ -0.51
LINC00343-202ENST00000415294 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
LINC00343-202ENST00000415294 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
LINC00343-202ENST00000415294 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
LINC00343-202ENST00000415294 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
LINC00343-202ENST00000415294 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
LINC00343-202ENST00000415294 FBXO45P0C2W1 286 aa11.86□□□□□ -0.51
LINC00343-202ENST00000415294 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
LINC00343-202ENST00000415294 IL21Q9HBE4 155 aa11.86□□□□□ -0.51
LINC00343-202ENST00000415294 PTK2Q05397 1052 aa11.85□□□□□ -0.51
LINC00343-202ENST00000415294 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
LINC00343-202ENST00000415294 MTRQ99707 1265 aa11.85□□□□□ -0.51
LINC00343-202ENST00000415294 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-202ENST00000415294 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
LINC00343-202ENST00000415294 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
LINC00343-202ENST00000415294 KCTD17Q8N5Z5 321 aa11.82□□□□□ -0.52
LINC00343-202ENST00000415294 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
LINC00343-202ENST00000415294 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
LINC00343-202ENST00000415294 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
LINC00343-202ENST00000415294 SLC6A16Q9GZN6 736 aa11.8□□□□□ -0.52
LINC00343-202ENST00000415294 PRDM9Q9NQV7 894 aa11.8□□□□□ -0.52
LINC00343-202ENST00000415294 TFIP11Q9UBB9 837 aaKnown RBP11.8□□□□□ -0.52
LINC00343-202ENST00000415294 ATP9BO43861 1147 aa11.79□□□□□ -0.52
LINC00343-202ENST00000415294 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
LINC00343-202ENST00000415294 USTQ9Y2C2 406 aa11.79□□□□□ -0.52
LINC00343-202ENST00000415294 MAFBQ9Y5Q3 323 aaPredicted RBP11.79□□□□□ -0.52
LINC00343-202ENST00000415294 TLL1O43897 1013 aa11.78□□□□□ -0.52
LINC00343-202ENST00000415294 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
LINC00343-202ENST00000415294 ERCC6Q03468 1493 aa11.77□□□□□ -0.53
LINC00343-202ENST00000415294 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.53
LINC00343-202ENST00000415294 IRX2Q9BZI1 471 aaPredicted RBP11.77□□□□□ -0.53
LINC00343-202ENST00000415294 RFX1P22670 979 aa11.76□□□□□ -0.53
LINC00343-202ENST00000415294 UNC93B1Q9H1C4 597 aa11.76□□□□□ -0.53
LINC00343-202ENST00000415294 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
LINC00343-202ENST00000415294 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.75□□□□□ -0.53
LINC00343-202ENST00000415294 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
LINC00343-202ENST00000415294 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
LINC00343-202ENST00000415294 ATG7O95352 703 aa11.73□□□□□ -0.53
LINC00343-202ENST00000415294 CCDC24Q8N4L8 307 aa11.73□□□□□ -0.53
LINC00343-202ENST00000415294 ARHGAP9Q9BRR9 750 aa11.73□□□□□ -0.53
LINC00343-202ENST00000415294 MYO15BQ96JP2 1530 aa11.73□□□□□ -0.53
LINC00343-202ENST00000415294 LZTS3O60299 673 aaPredicted RBP11.72□□□□□ -0.53
LINC00343-202ENST00000415294 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
LINC00343-202ENST00000415294 PLEKHM2Q8IWE5 1019 aa11.72□□□□□ -0.53
LINC00343-202ENST00000415294 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
LINC00343-202ENST00000415294 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
LINC00343-202ENST00000415294 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
LINC00343-202ENST00000415294 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
LINC00343-202ENST00000415294 ZBTB33Q86T24 672 aa11.7□□□□□ -0.54
LINC00343-202ENST00000415294 ADAM32Q8TC27 787 aa11.7□□□□□ -0.54
LINC00343-202ENST00000415294 OCSTAMPQ9BR26 566 aa11.7□□□□□ -0.54
LINC00343-202ENST00000415294 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
LINC00343-202ENST00000415294 BPHLQ86WA6 291 aaPredicted RBP11.69□□□□□ -0.54
LINC00343-202ENST00000415294 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
LINC00343-202ENST00000415294 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
LINC00343-202ENST00000415294 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
LINC00343-202ENST00000415294 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 S1PR4O95977 384 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 SKIP12755 728 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 ELOAQ14241 798 aaKnown RBP11.67□□□□□ -0.54
LINC00343-202ENST00000415294 MAP7D1Q3KQU3 841 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 USP17L2Q6R6M4 530 aa11.67□□□□□ -0.54
LINC00343-202ENST00000415294 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms