RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 CDC42BPGQ6DT37 1551 aa20.1■□□□□ 0.81
LRCH3-202ENST00000414675 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
LRCH3-202ENST00000414675 U2SURPO15042 1029 aaKnown RBP20.1■□□□□ 0.81
LRCH3-202ENST00000414675 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
LRCH3-202ENST00000414675 SLIT1O75093 1534 aa20.1■□□□□ 0.81
LRCH3-202ENST00000414675 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
LRCH3-202ENST00000414675 BCAR3O75815 825 aa20.09■□□□□ 0.81
LRCH3-202ENST00000414675 PNPLA6Q8IY17 1366 aa20.09■□□□□ 0.81
LRCH3-202ENST00000414675 MON2Q7Z3U7 1717 aa20.09■□□□□ 0.81
LRCH3-202ENST00000414675 EDC4Q6P2E9 1401 aaKnown RBP20.09■□□□□ 0.81
LRCH3-202ENST00000414675 MAP2P11137 1827 aaKnown RBP20.08■□□□□ 0.81
LRCH3-202ENST00000414675 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
LRCH3-202ENST00000414675 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.81
LRCH3-202ENST00000414675 AKAP12Q02952 1782 aa20.08■□□□□ 0.8
LRCH3-202ENST00000414675 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
LRCH3-202ENST00000414675 NME9Q86XW9 330 aa20.07■□□□□ 0.8
LRCH3-202ENST00000414675 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
LRCH3-202ENST00000414675 CCDC61Q9Y6R9 512 aa20.07■□□□□ 0.8
LRCH3-202ENST00000414675 WDR63Q8IWG1 891 aa20.06■□□□□ 0.8
LRCH3-202ENST00000414675 POLKQ9UBT6 870 aa20.06■□□□□ 0.8
LRCH3-202ENST00000414675 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
LRCH3-202ENST00000414675 ITSN1Q15811 1721 aa20.06■□□□□ 0.8
LRCH3-202ENST00000414675 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
LRCH3-202ENST00000414675 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
LRCH3-202ENST00000414675 NCBP3Q53F19 620 aaKnown RBP20.03■□□□□ 0.8
LRCH3-202ENST00000414675 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.8
LRCH3-202ENST00000414675 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
LRCH3-202ENST00000414675 TMPOP42166 694 aaKnown RBP20.01■□□□□ 0.79
LRCH3-202ENST00000414675 RIMS1Q86UR5 1692 aaKnown RBP20.01■□□□□ 0.79
LRCH3-202ENST00000414675 EMILIN1Q9Y6C2 1016 aa20.01■□□□□ 0.79
LRCH3-202ENST00000414675 NUTM2FA1L443 756 aa20■□□□□ 0.79
LRCH3-202ENST00000414675 AMOTL2Q9Y2J4 779 aa20■□□□□ 0.79
LRCH3-202ENST00000414675 ADAMTSL3P82987 1691 aa20■□□□□ 0.79
LRCH3-202ENST00000414675 THEMISQ8N1K5 641 aaPredicted RBP20■□□□□ 0.79
LRCH3-202ENST00000414675 TRIM35Q9UPQ4 493 aa20■□□□□ 0.79
LRCH3-202ENST00000414675 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
LRCH3-202ENST00000414675 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
LRCH3-202ENST00000414675 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
LRCH3-202ENST00000414675 NRKQ7Z2Y5 1582 aa19.98■□□□□ 0.79
LRCH3-202ENST00000414675 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
LRCH3-202ENST00000414675 RARSP54136 660 aaKnown RBP19.97■□□□□ 0.79
LRCH3-202ENST00000414675 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
LRCH3-202ENST00000414675 COG3Q96JB2 828 aa19.96■□□□□ 0.79
LRCH3-202ENST00000414675 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
LRCH3-202ENST00000414675 AATKQ6ZMQ8 1374 aa19.96■□□□□ 0.79
LRCH3-202ENST00000414675 KDM2BQ8NHM5 1336 aa19.96■□□□□ 0.79
LRCH3-202ENST00000414675 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
LRCH3-202ENST00000414675 ACEP12821 1306 aa19.95■□□□□ 0.78
LRCH3-202ENST00000414675 CEP170BQ9Y4F5 1589 aaPredicted RBP19.95■□□□□ 0.78
LRCH3-202ENST00000414675 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
LRCH3-202ENST00000414675 RSPH6AQ9H0K4 717 aa19.95■□□□□ 0.78
LRCH3-202ENST00000414675 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
LRCH3-202ENST00000414675 MYH16Q9H6N6 1097 aa19.95■□□□□ 0.78
LRCH3-202ENST00000414675 PLEKHG3A1L390 1219 aa19.94■□□□□ 0.78
LRCH3-202ENST00000414675 RRS1Q15050 365 aaKnown RBP19.94■□□□□ 0.78
LRCH3-202ENST00000414675 TSR2Q969E8 191 aaKnown RBP19.94■□□□□ 0.78
LRCH3-202ENST00000414675 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
LRCH3-202ENST00000414675 MSH5O43196 834 aa19.93■□□□□ 0.78
LRCH3-202ENST00000414675 FCHSD2O94868 740 aa19.93■□□□□ 0.78
LRCH3-202ENST00000414675 RIPK4P57078 832 aa19.93■□□□□ 0.78
LRCH3-202ENST00000414675 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
LRCH3-202ENST00000414675 PRKAR2BP31323 418 aa19.93■□□□□ 0.78
LRCH3-202ENST00000414675 IL13P35225 146 aa19.93■□□□□ 0.78
LRCH3-202ENST00000414675 RGPD8O14715 1765 aaPredicted RBP19.92■□□□□ 0.78
LRCH3-202ENST00000414675 HMOX1P09601 288 aa19.92■□□□□ 0.78
LRCH3-202ENST00000414675 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
LRCH3-202ENST00000414675 BCL2L13Q9BXK5 485 aa19.92■□□□□ 0.78
LRCH3-202ENST00000414675 USP6P35125 1406 aa19.91■□□□□ 0.78
LRCH3-202ENST00000414675 PDE3AQ14432 1141 aa19.91■□□□□ 0.78
LRCH3-202ENST00000414675 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
LRCH3-202ENST00000414675 TNNQ9UQP3 1299 aa19.91■□□□□ 0.78
LRCH3-202ENST00000414675 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
LRCH3-202ENST00000414675 PHACTR3Q96KR7 559 aa19.9■□□□□ 0.78
LRCH3-202ENST00000414675 PNNQ9H307 717 aaKnown RBP19.9■□□□□ 0.78
LRCH3-202ENST00000414675 CANXP27824 592 aaKnown RBP19.9■□□□□ 0.78
LRCH3-202ENST00000414675 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.77
LRCH3-202ENST00000414675 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.77
LRCH3-202ENST00000414675 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
LRCH3-202ENST00000414675 SSH2Q76I76 1423 aa19.88■□□□□ 0.77
LRCH3-202ENST00000414675 KCNA6P17658 529 aa19.88■□□□□ 0.77
LRCH3-202ENST00000414675 EXOSC9Q06265 439 aaKnown RBP19.88■□□□□ 0.77
LRCH3-202ENST00000414675 CENPQQ7L2Z9 268 aaPredicted RBP19.88■□□□□ 0.77
LRCH3-202ENST00000414675 IL16Q14005 1332 aa19.88■□□□□ 0.77
LRCH3-202ENST00000414675 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
LRCH3-202ENST00000414675 RLBP1P12271 317 aa19.87■□□□□ 0.77
LRCH3-202ENST00000414675 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
LRCH3-202ENST00000414675 ERICH6Q7L0X2 663 aa19.85■□□□□ 0.77
LRCH3-202ENST00000414675 PEAK1Q9H792 1746 aa19.84■□□□□ 0.77
LRCH3-202ENST00000414675 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
LRCH3-202ENST00000414675 ZNF142P52746 1687 aaPredicted RBP19.84■□□□□ 0.77
LRCH3-202ENST00000414675 MS4A1P11836 297 aa19.83■□□□□ 0.77
LRCH3-202ENST00000414675 DLG5Q8TDM6 1919 aa19.83■□□□□ 0.76
LRCH3-202ENST00000414675 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
LRCH3-202ENST00000414675 PDE4AP27815 886 aa19.82■□□□□ 0.76
LRCH3-202ENST00000414675 THUMPD2Q9BTF0 503 aaKnown RBP19.82■□□□□ 0.76
LRCH3-202ENST00000414675 USP31Q70CQ4 1352 aa19.82■□□□□ 0.76
LRCH3-202ENST00000414675 PIK3R4Q99570 1358 aa19.82■□□□□ 0.76
LRCH3-202ENST00000414675 NEFMP07197 916 aa19.81■□□□□ 0.76
LRCH3-202ENST00000414675 CLUAP1Q96AJ1 413 aa19.81■□□□□ 0.76
LRCH3-202ENST00000414675 IGHDP01880 384 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms