RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
RFFL-204ENST00000414419 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
RFFL-204ENST00000414419 CDK12Q9NYV4 1490 aaPredicted RBP15.86■□□□□ 0.13
RFFL-204ENST00000414419 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
RFFL-204ENST00000414419 UNC5CLQ8IV45 518 aa15.85■□□□□ 0.13
RFFL-204ENST00000414419 BCL9LQ86UU0 1499 aa15.84■□□□□ 0.13
RFFL-204ENST00000414419 ABTB2Q8N961 1025 aa15.84■□□□□ 0.13
RFFL-204ENST00000414419 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
RFFL-204ENST00000414419 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
RFFL-204ENST00000414419 NUTM2GQ5VZR2 741 aa15.83■□□□□ 0.12
RFFL-204ENST00000414419 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
RFFL-204ENST00000414419 ATRNO75882 1429 aa15.83■□□□□ 0.12
RFFL-204ENST00000414419 SLIT2O94813 1529 aa15.83■□□□□ 0.12
RFFL-204ENST00000414419 PLCH1Q4KWH8 1693 aa15.83■□□□□ 0.12
RFFL-204ENST00000414419 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
RFFL-204ENST00000414419 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
RFFL-204ENST00000414419 ATAD2Q6PL18 1390 aa15.82■□□□□ 0.12
RFFL-204ENST00000414419 SBNO2Q9Y2G9 1366 aa15.82■□□□□ 0.12
RFFL-204ENST00000414419 FAM83GA6ND36 823 aa15.81■□□□□ 0.12
RFFL-204ENST00000414419 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
RFFL-204ENST00000414419 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
RFFL-204ENST00000414419 CCDC9Q9Y3X0 531 aaKnown RBP15.81■□□□□ 0.12
RFFL-204ENST00000414419 RGS12O14924 1447 aa15.8■□□□□ 0.12
RFFL-204ENST00000414419 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
RFFL-204ENST00000414419 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
RFFL-204ENST00000414419 PRDM11Q9NQV5 511 aa15.8■□□□□ 0.12
RFFL-204ENST00000414419 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
RFFL-204ENST00000414419 CRYBG1Q9Y4K1 1723 aa15.8■□□□□ 0.12
RFFL-204ENST00000414419 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
RFFL-204ENST00000414419 USP6P35125 1406 aa15.78■□□□□ 0.12
RFFL-204ENST00000414419 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
RFFL-204ENST00000414419 PHRF1Q9P1Y6 1649 aaKnown RBP15.78■□□□□ 0.12
RFFL-204ENST00000414419 AKAP12Q02952 1782 aa15.77■□□□□ 0.12
RFFL-204ENST00000414419 VPS72Q15906 364 aa15.77■□□□□ 0.12
RFFL-204ENST00000414419 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
RFFL-204ENST00000414419 NLRP6P59044 892 aa15.76■□□□□ 0.11
RFFL-204ENST00000414419 ZC3H6P61129 1189 aaKnown RBP15.76■□□□□ 0.11
RFFL-204ENST00000414419 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
RFFL-204ENST00000414419 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
RFFL-204ENST00000414419 PUS7Q96PZ0 661 aaKnown RBP15.74■□□□□ 0.11
RFFL-204ENST00000414419 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
RFFL-204ENST00000414419 USP47Q96K76 1375 aa15.74■□□□□ 0.11
RFFL-204ENST00000414419 GCP02774 474 aa15.73■□□□□ 0.11
RFFL-204ENST00000414419 CHRNA2Q15822 529 aa15.73■□□□□ 0.11
RFFL-204ENST00000414419 HDGFL2Q7Z4V5 671 aaPredicted RBP15.73■□□□□ 0.11
RFFL-204ENST00000414419 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
RFFL-204ENST00000414419 GLI3P10071 1580 aa15.73■□□□□ 0.11
RFFL-204ENST00000414419 USP19O94966 1318 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 TTC21BQ7Z4L5 1316 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 TTC21AQ8NDW8 1320 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 A0A0G2JS52 829 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 EVA1CP58658 441 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 TMF1P82094 1093 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 MYT1Q01538 1121 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 TESK2Q96S53 571 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 TERF2IPQ9NYB0 399 aa15.72■□□□□ 0.11
RFFL-204ENST00000414419 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.11
RFFL-204ENST00000414419 NRKQ7Z2Y5 1582 aa15.71■□□□□ 0.11
RFFL-204ENST00000414419 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
RFFL-204ENST00000414419 ZBTB7CA1YPR0 619 aa15.71■□□□□ 0.11
RFFL-204ENST00000414419 SLC12A5Q9H2X9 1139 aa15.71■□□□□ 0.11
RFFL-204ENST00000414419 STRN4Q9NRL3 753 aa15.71■□□□□ 0.11
RFFL-204ENST00000414419 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
RFFL-204ENST00000414419 SSH2Q76I76 1423 aa15.7■□□□□ 0.1
RFFL-204ENST00000414419 BRWD3Q6RI45 1802 aa15.7■□□□□ 0.1
RFFL-204ENST00000414419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.69■□□□□ 0.13e-6■■□□□ 13.9
RFFL-204ENST00000414419 SEPT12Q8IYM1 358 aa15.69■□□□□ 0.1
RFFL-204ENST00000414419 KCNH5Q8NCM2 988 aa15.69■□□□□ 0.1
RFFL-204ENST00000414419 CPDO75976 1380 aa15.69■□□□□ 0.1
RFFL-204ENST00000414419 NINLQ9Y2I6 1382 aa15.68■□□□□ 0.1
RFFL-204ENST00000414419 FAM98CQ17RN3 349 aaKnown RBP15.68■□□□□ 0.1
RFFL-204ENST00000414419 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
RFFL-204ENST00000414419 SPATA31A5Q5VU36 1347 aa15.68■□□□□ 0.1
RFFL-204ENST00000414419 SPATA31A7Q8IWB4 1347 aa15.68■□□□□ 0.1
RFFL-204ENST00000414419 ONECUT3O60422 494 aaPredicted RBP15.67■□□□□ 0.1
RFFL-204ENST00000414419 SOX12O15370 315 aa15.66■□□□□ 0.1
RFFL-204ENST00000414419 SLIT3O75094 1523 aa15.66■□□□□ 0.1
RFFL-204ENST00000414419 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
RFFL-204ENST00000414419 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
RFFL-204ENST00000414419 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
RFFL-204ENST00000414419 CAMTA1Q9Y6Y1 1673 aa15.64■□□□□ 0.09
RFFL-204ENST00000414419 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
RFFL-204ENST00000414419 KRT27Q7Z3Y8 459 aa15.64■□□□□ 0.09
RFFL-204ENST00000414419 NME9Q86XW9 330 aa15.64■□□□□ 0.09
RFFL-204ENST00000414419 SPATA31A1Q5TZJ5 1347 aa15.64■□□□□ 0.09
RFFL-204ENST00000414419 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
RFFL-204ENST00000414419 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
RFFL-204ENST00000414419 LARP1Q6PKG0 1096 aaKnown RBP15.62■□□□□ 0.09
RFFL-204ENST00000414419 CCDC125Q86Z20 511 aa15.62■□□□□ 0.09
RFFL-204ENST00000414419 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
RFFL-204ENST00000414419 EIF4G2P78344 907 aaKnown RBP eCLIP15.61■□□□□ 0.09
RFFL-204ENST00000414419 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
RFFL-204ENST00000414419 RGPD5Q99666 1765 aa15.61■□□□□ 0.09
RFFL-204ENST00000414419 SF3B2Q13435 895 aaKnown RBP15.6■□□□□ 0.09
RFFL-204ENST00000414419 ARHGEF25Q86VW2 580 aa15.6■□□□□ 0.09
RFFL-204ENST00000414419 TCP11L2Q8N4U5 519 aa15.6■□□□□ 0.09
RFFL-204ENST00000414419 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
RFFL-204ENST00000414419 ANKRD36BQ8N2N9 1353 aa15.6■□□□□ 0.09
RFFL-204ENST00000414419 COL18A1P39060 1754 aa15.59■□□□□ 0.09
RFFL-204ENST00000414419 COL5A2P05997 1499 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms