RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ANKRD36BQ8N2N9 1353 aa42.37■■■■■ 4.37
CSNK1E-206ENST00000413574 NRKQ7Z2Y5 1582 aa42.36■■■■■ 4.37
CSNK1E-206ENST00000413574 LMOD2Q6P5Q4 547 aa42.35■■■■■ 4.37
CSNK1E-206ENST00000413574 TNS3Q68CZ2 1445 aa42.35■■■■■ 4.37
CSNK1E-206ENST00000413574 ALS2Q96Q42 1657 aa42.35■■■■■ 4.37
CSNK1E-206ENST00000413574 SSH2Q76I76 1423 aa42.35■■■■■ 4.37
CSNK1E-206ENST00000413574 SHPRHQ149N8 1683 aa42.31■■■■■ 4.36
CSNK1E-206ENST00000413574 JCADQ9P266 1359 aa42.31■■■■■ 4.36
CSNK1E-206ENST00000413574 PNPLA6Q8IY17 1366 aa42.3■■■■■ 4.36
CSNK1E-206ENST00000413574 TTC21BQ7Z4L5 1316 aa42.3■■■■■ 4.36
CSNK1E-206ENST00000413574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP42.28■■■■■ 4.36
CSNK1E-206ENST00000413574 CARD14Q9BXL6 1004 aa42.28■■■■■ 4.36
CSNK1E-206ENST00000413574 PANK3Q9H999 370 aa42.28■■■■■ 4.36
CSNK1E-206ENST00000413574 PLEKHG5O94827 1062 aa42.27■■■■■ 4.36
CSNK1E-206ENST00000413574 BRD4O60885 1362 aaPredicted RBP42.26■■■■■ 4.36
CSNK1E-206ENST00000413574 EDC4Q6P2E9 1401 aaKnown RBP42.26■■■■■ 4.36
CSNK1E-206ENST00000413574 NUTM2GQ5VZR2 741 aa42.26■■■■■ 4.36
CSNK1E-206ENST00000413574 PIK3C2AO00443 1686 aa42.24■■■■■ 4.35
CSNK1E-206ENST00000413574 ABTB2Q8N961 1025 aa42.24■■■■■ 4.35
CSNK1E-206ENST00000413574 ARHGEF10O15013 1369 aa42.22■■■■■ 4.35
CSNK1E-206ENST00000413574 COL22A1Q8NFW1 1626 aaPredicted RBP42.22■■■■■ 4.35
CSNK1E-206ENST00000413574 NSD3Q9BZ95 1437 aa42.2■■■■■ 4.35
CSNK1E-206ENST00000413574 TTC21AQ8NDW8 1320 aa42.19■■■■■ 4.34
CSNK1E-206ENST00000413574 NME9Q86XW9 330 aa42.18■■■■■ 4.34
CSNK1E-206ENST00000413574 CABLES1Q8TDN4 633 aa42.18■■■■■ 4.34
CSNK1E-206ENST00000413574 ZRANB1Q9UGI0 708 aa42.17■■■■■ 4.34
CSNK1E-206ENST00000413574 ZNF316A6NFI3 1004 aaPredicted RBP42.16■■■■■ 4.34
CSNK1E-206ENST00000413574 NLRP6P59044 892 aa42.13■■■■■ 4.34
CSNK1E-206ENST00000413574 MARF1Q9Y4F3 1742 aaKnown RBP42.13■■■■■ 4.34
CSNK1E-206ENST00000413574 CRYBG1Q9Y4K1 1723 aa42.13■■■■■ 4.33
CSNK1E-206ENST00000413574 NUTM2BA6NNL0 878 aaPredicted RBP42.13■■■■■ 4.33
CSNK1E-206ENST00000413574 NUTM2EB1AL46 878 aaPredicted RBP42.13■■■■■ 4.33
CSNK1E-206ENST00000413574 NUTM2AQ8IVF1 878 aaPredicted RBP42.13■■■■■ 4.33
CSNK1E-206ENST00000413574 MED1Q15648 1581 aaPredicted RBP42.12■■■■■ 4.33
CSNK1E-206ENST00000413574 ABCA3Q99758 1704 aa42.12■■■■■ 4.33
CSNK1E-206ENST00000413574 KIF20BQ96Q89 1820 aa42.1■■■■■ 4.33
CSNK1E-206ENST00000413574 SPATA31A6Q5VVP1 1343 aa42.09■■■■■ 4.33
CSNK1E-206ENST00000413574 NLRP13Q86W25 1043 aa42.08■■■■■ 4.33
CSNK1E-206ENST00000413574 LRP6O75581 1613 aa42.07■■■■■ 4.32
CSNK1E-206ENST00000413574 PHRF1Q9P1Y6 1649 aaKnown RBP42.07■■■■■ 4.32
CSNK1E-206ENST00000413574 FYB1O15117 783 aa42.06■■■■■ 4.32
CSNK1E-206ENST00000413574 GGNBP2Q9H3C7 697 aa42.05■■■■■ 4.32
CSNK1E-206ENST00000413574 PER1O15534 1290 aaPredicted RBP42.02■■■■■ 4.32
CSNK1E-206ENST00000413574 DDX10Q13206 875 aaKnown RBP42.02■■■■■ 4.32
CSNK1E-206ENST00000413574 USP19O94966 1318 aa42.02■■■■■ 4.32
CSNK1E-206ENST00000413574 USP31Q70CQ4 1352 aa42.02■■■■■ 4.32
CSNK1E-206ENST00000413574 USP54Q70EL1 1684 aa42.02■■■■■ 4.32
CSNK1E-206ENST00000413574 HAP1P54257 671 aaPredicted RBP42.02■■■■■ 4.32
CSNK1E-206ENST00000413574 CGNL1Q0VF96 1302 aa42.01■■■■■ 4.32
CSNK1E-206ENST00000413574 KNSTRNQ9Y448 316 aa42.01■■■■■ 4.32
CSNK1E-206ENST00000413574 OVOS2A0A0J9YW53 1432 aa42■■■■■ 4.31
CSNK1E-206ENST00000413574 OVOS2Q6IE36 1432 aa42■■■■■ 4.31
CSNK1E-206ENST00000413574 ADAMTS2O95450 1211 aa41.99■■■■■ 4.31
CSNK1E-206ENST00000413574 SOX12O15370 315 aa41.97■■■■■ 4.31
CSNK1E-206ENST00000413574 SLIT3O75094 1523 aa41.96■■■■■ 4.31
CSNK1E-206ENST00000413574 COG3Q96JB2 828 aa41.95■■■■■ 4.31
CSNK1E-206ENST00000413574 GCP02774 474 aa41.95■■■■■ 4.31
CSNK1E-206ENST00000413574 AMER1Q5JTC6 1135 aaPredicted RBP41.91■■■■■ 4.3
CSNK1E-206ENST00000413574 ZC3H6P61129 1189 aaKnown RBP41.91■■■■■ 4.3
CSNK1E-206ENST00000413574 ANKRD26Q9UPS8 1709 aa41.91■■■■■ 4.3
CSNK1E-206ENST00000413574 MEX3CQ5U5Q3 659 aaKnown RBP41.89■■■■■ 4.3
CSNK1E-206ENST00000413574 CNGB1Q14028 1251 aaPredicted RBP41.88■■■■■ 4.3
CSNK1E-206ENST00000413574 NFAT5O94916 1531 aa41.87■■■■■ 4.29
CSNK1E-206ENST00000413574 FBLN1P23142 703 aa41.86■■■■■ 4.29
CSNK1E-206ENST00000413574 KIAA0232Q92628 1395 aa41.85■■■■■ 4.29
CSNK1E-206ENST00000413574 CC2D1BQ5T0F9 858 aaKnown RBP41.84■■■■■ 4.29
CSNK1E-206ENST00000413574 KCNH5Q8NCM2 988 aa41.84■■■■■ 4.29
CSNK1E-206ENST00000413574 C8orf37Q96NL8 207 aa41.84■■■■■ 4.29
CSNK1E-206ENST00000413574 NSD2O96028 1365 aa41.82■■■■■ 4.29
CSNK1E-206ENST00000413574 ZBTB7CA1YPR0 619 aa41.81■■■■■ 4.28
CSNK1E-206ENST00000413574 FAM83GA6ND36 823 aa41.8■■■■■ 4.28
CSNK1E-206ENST00000413574 CHRNA2Q15822 529 aa41.8■■■■■ 4.28
CSNK1E-206ENST00000413574 LTN1O94822 1766 aa41.79■■■■■ 4.28
CSNK1E-206ENST00000413574 PRDM11Q9NQV5 511 aa41.78■■■■■ 4.28
CSNK1E-206ENST00000413574 TNNT2P45379 298 aaPredicted RBP41.77■■■■■ 4.28
CSNK1E-206ENST00000413574 NGLY1Q96IV0 654 aa41.77■■■■■ 4.28
CSNK1E-206ENST00000413574 CPDO75976 1380 aa41.76■■■■■ 4.28
CSNK1E-206ENST00000413574 MORC1Q86VD1 984 aa41.75■■■■■ 4.27
CSNK1E-206ENST00000413574 ARHGEF25Q86VW2 580 aa41.74■■■■■ 4.27
CSNK1E-206ENST00000413574 PLCH1Q4KWH8 1693 aa41.74■■■■■ 4.27
CSNK1E-206ENST00000413574 COL14A1Q05707 1796 aaKnown RBP41.73■■■■■ 4.27
CSNK1E-206ENST00000413574 NPC1L1Q9UHC9 1359 aa41.73■■■■■ 4.27
CSNK1E-206ENST00000413574 RRS1Q15050 365 aaKnown RBP41.71■■■■■ 4.27
CSNK1E-206ENST00000413574 MAP2P11137 1827 aaKnown RBP41.71■■■■■ 4.27
CSNK1E-206ENST00000413574 COL18A1P39060 1754 aa41.69■■■■■ 4.26
CSNK1E-206ENST00000413574 AFF2P51816 1311 aa41.68■■■■■ 4.26
CSNK1E-206ENST00000413574 RGPD5Q99666 1765 aa41.68■■■■■ 4.26
CSNK1E-206ENST00000413574 MAP3K19Q56UN5 1328 aa41.67■■■■■ 4.26
CSNK1E-206ENST00000413574 LMO7Q8WWI1 1683 aa41.66■■■■■ 4.26
CSNK1E-206ENST00000413574 SLIT2O94813 1529 aa41.66■■■■■ 4.26
CSNK1E-206ENST00000413574 BTG4Q9NY30 223 aa41.66■■■■■ 4.26
CSNK1E-206ENST00000413574 FNBP4Q8N3X1 1017 aaPredicted RBP41.65■■■■■ 4.26
CSNK1E-206ENST00000413574 CAMTA1Q9Y6Y1 1673 aa41.63■■■■■ 4.26
CSNK1E-206ENST00000413574 AXIN2Q9Y2T1 843 aa41.63■■■■■ 4.26
CSNK1E-206ENST00000413574 AATKQ6ZMQ8 1374 aa41.63■■■■■ 4.25
CSNK1E-206ENST00000413574 NWD2Q9ULI1 1742 aa41.63■■■■■ 4.25
CSNK1E-206ENST00000413574 PEAK1Q9H792 1746 aa41.62■■■■■ 4.25
CSNK1E-206ENST00000413574 EMILIN1Q9Y6C2 1016 aa41.62■■■■■ 4.25
CSNK1E-206ENST00000413574 PHF23Q9BUL5 403 aaPredicted RBP41.61■■■■■ 4.25
CSNK1E-206ENST00000413574 BCL9LQ86UU0 1499 aa41.6■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms