RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 PAK3O75914 559 aaPredicted RBP22.34■■□□□ 1.17
MCF2L-211ENST00000413354 SLIT2O94813 1529 aa22.34■■□□□ 1.17
MCF2L-211ENST00000413354 BCL9LQ86UU0 1499 aa22.34■■□□□ 1.17
MCF2L-211ENST00000413354 ACEP12821 1306 aa22.33■■□□□ 1.17
MCF2L-211ENST00000413354 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.17
MCF2L-211ENST00000413354 CABLES1Q8TDN4 633 aa22.32■■□□□ 1.16
MCF2L-211ENST00000413354 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
MCF2L-211ENST00000413354 SBNO2Q9Y2G9 1366 aa22.32■■□□□ 1.16
MCF2L-211ENST00000413354 RGS12O14924 1447 aa22.31■■□□□ 1.16
MCF2L-211ENST00000413354 BRD4O60885 1362 aaPredicted RBP22.3■■□□□ 1.16
MCF2L-211ENST00000413354 PLEKHG5O94827 1062 aa22.3■■□□□ 1.16
MCF2L-211ENST00000413354 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
MCF2L-211ENST00000413354 PHRF1Q9P1Y6 1649 aaKnown RBP22.29■■□□□ 1.16
MCF2L-211ENST00000413354 UNC5CLQ8IV45 518 aa22.29■■□□□ 1.16
MCF2L-211ENST00000413354 COL14A1Q05707 1796 aaKnown RBP22.29■■□□□ 1.16
MCF2L-211ENST00000413354 ATAD2Q6PL18 1390 aa22.27■■□□□ 1.16
MCF2L-211ENST00000413354 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
MCF2L-211ENST00000413354 NRAPQ86VF7 1730 aa22.25■■□□□ 1.15
MCF2L-211ENST00000413354 AKAP12Q02952 1782 aa22.25■■□□□ 1.15
MCF2L-211ENST00000413354 GJD4Q96KN9 370 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-211ENST00000413354 USP6P35125 1406 aa22.23■■□□□ 1.15
MCF2L-211ENST00000413354 CABP1Q9NZU7 370 aa22.23■■□□□ 1.15
MCF2L-211ENST00000413354 GLI3P10071 1580 aa22.22■■□□□ 1.15
MCF2L-211ENST00000413354 FAM83GA6ND36 823 aa22.21■■□□□ 1.15
MCF2L-211ENST00000413354 ABTB2Q8N961 1025 aa22.21■■□□□ 1.15
MCF2L-211ENST00000413354 TIMELESSQ9UNS1 1208 aa22.21■■□□□ 1.15
MCF2L-211ENST00000413354 NRKQ7Z2Y5 1582 aa22.21■■□□□ 1.15
MCF2L-211ENST00000413354 VPS72Q15906 364 aa22.2■■□□□ 1.14
MCF2L-211ENST00000413354 PRDM11Q9NQV5 511 aa22.19■■□□□ 1.14
MCF2L-211ENST00000413354 USP19O94966 1318 aa22.18■■□□□ 1.14
MCF2L-211ENST00000413354 ZNF692Q9BU19 519 aaPredicted RBP22.18■■□□□ 1.14
MCF2L-211ENST00000413354 MON2Q7Z3U7 1717 aa22.17■■□□□ 1.14
MCF2L-211ENST00000413354 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
MCF2L-211ENST00000413354 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
MCF2L-211ENST00000413354 NLRP13Q86W25 1043 aa22.17■■□□□ 1.14
MCF2L-211ENST00000413354 KIAA0232Q92628 1395 aa22.16■■□□□ 1.14
MCF2L-211ENST00000413354 UPF1Q92900 1129 aaKnown RBP eCLIP22.16■■□□□ 1.14
MCF2L-211ENST00000413354 BTG4Q9NY30 223 aa22.16■■□□□ 1.14
MCF2L-211ENST00000413354 CCDC9Q9Y3X0 531 aaKnown RBP22.16■■□□□ 1.14
MCF2L-211ENST00000413354 PIK3C2AO00443 1686 aa22.16■■□□□ 1.14
MCF2L-211ENST00000413354 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
MCF2L-211ENST00000413354 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.13
MCF2L-211ENST00000413354 CPDO75976 1380 aa22.13■■□□□ 1.13
MCF2L-211ENST00000413354 PUS7Q96PZ0 661 aaKnown RBP22.13■■□□□ 1.13
MCF2L-211ENST00000413354 BRWD3Q6RI45 1802 aa22.13■■□□□ 1.13
MCF2L-211ENST00000413354 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
MCF2L-211ENST00000413354 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
MCF2L-211ENST00000413354 SLIT3O75094 1523 aa22.11■■□□□ 1.13
MCF2L-211ENST00000413354 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
MCF2L-211ENST00000413354 ZC3H6P61129 1189 aaKnown RBP22.11■■□□□ 1.13
MCF2L-211ENST00000413354 USP47Q96K76 1375 aa22.11■■□□□ 1.13
MCF2L-211ENST00000413354 NLRP6P59044 892 aa22.1■■□□□ 1.13
MCF2L-211ENST00000413354 LMO7Q8WWI1 1683 aa22.1■■□□□ 1.13
MCF2L-211ENST00000413354 NINLQ9Y2I6 1382 aa22.1■■□□□ 1.13
MCF2L-211ENST00000413354 TTC21BQ7Z4L5 1316 aa22.09■■□□□ 1.13
MCF2L-211ENST00000413354 GCP02774 474 aa22.09■■□□□ 1.13
MCF2L-211ENST00000413354 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
MCF2L-211ENST00000413354 CHRNA2Q15822 529 aa22.08■■□□□ 1.13
MCF2L-211ENST00000413354 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
MCF2L-211ENST00000413354 TESK2Q96S53 571 aa22.08■■□□□ 1.13
MCF2L-211ENST00000413354 HDGFL2Q7Z4V5 671 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-211ENST00000413354 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
MCF2L-211ENST00000413354 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
MCF2L-211ENST00000413354 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
MCF2L-211ENST00000413354 ONECUT3O60422 494 aaPredicted RBP22.06■■□□□ 1.12
MCF2L-211ENST00000413354 SEPT12Q8IYM1 358 aa22.06■■□□□ 1.12
MCF2L-211ENST00000413354 CD163L1Q9NR16 1453 aa22.06■■□□□ 1.12
MCF2L-211ENST00000413354 TERF2IPQ9NYB0 399 aa22.05■■□□□ 1.12
MCF2L-211ENST00000413354 A0A0G2JS52 829 aa22.04■■□□□ 1.12
MCF2L-211ENST00000413354 MYT1Q01538 1121 aa22.04■■□□□ 1.12
MCF2L-211ENST00000413354 EDC4Q6P2E9 1401 aaKnown RBP22.04■■□□□ 1.12
MCF2L-211ENST00000413354 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
MCF2L-211ENST00000413354 TMF1P82094 1093 aa22.03■■□□□ 1.12
MCF2L-211ENST00000413354 KCNH5Q8NCM2 988 aa22.03■■□□□ 1.12
MCF2L-211ENST00000413354 STRN4Q9NRL3 753 aa22.03■■□□□ 1.12
MCF2L-211ENST00000413354 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
MCF2L-211ENST00000413354 EVA1CP58658 441 aa22.02■■□□□ 1.12
MCF2L-211ENST00000413354 FAM98CQ17RN3 349 aaKnown RBP22.02■■□□□ 1.12
MCF2L-211ENST00000413354 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
MCF2L-211ENST00000413354 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
MCF2L-211ENST00000413354 A0A1W2PP64 1363 aa22■■□□□ 1.11
MCF2L-211ENST00000413354 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
MCF2L-211ENST00000413354 CCDC125Q86Z20 511 aa22■■□□□ 1.11
MCF2L-211ENST00000413354 COL5A2P05997 1499 aaPredicted RBP22■■□□□ 1.11
MCF2L-211ENST00000413354 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
MCF2L-211ENST00000413354 COL18A1P39060 1754 aa21.99■■□□□ 1.11
MCF2L-211ENST00000413354 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
MCF2L-211ENST00000413354 KRT27Q7Z3Y8 459 aa21.99■■□□□ 1.11
MCF2L-211ENST00000413354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.99■■□□□ 1.11
MCF2L-211ENST00000413354 NFAT5O94916 1531 aa21.99■■□□□ 1.11
MCF2L-211ENST00000413354 ABCC6O95255 1503 aa21.99■■□□□ 1.11
MCF2L-211ENST00000413354 EP400Q96L91 3159 aa21.97■■□□□ 1.11
MCF2L-211ENST00000413354 ZBTB7CA1YPR0 619 aa21.97■■□□□ 1.11
MCF2L-211ENST00000413354 ANKRD36BQ8N2N9 1353 aa21.95■■□□□ 1.1
MCF2L-211ENST00000413354 BLMP54132 1417 aaPredicted RBP21.95■■□□□ 1.1
MCF2L-211ENST00000413354 LTN1O94822 1766 aa21.94■■□□□ 1.1
MCF2L-211ENST00000413354 RGPD5Q99666 1765 aa21.94■■□□□ 1.1
MCF2L-211ENST00000413354 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
MCF2L-211ENST00000413354 BARGINQ6ZT62 677 aa21.94■■□□□ 1.1
MCF2L-211ENST00000413354 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms