RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 POLR3AO14802 1390 aaPredicted RBP10.87□□□□□ -0.67
CPSF4-202ENST00000412686 AKAP12Q02952 1782 aa10.86□□□□□ -0.67
CPSF4-202ENST00000412686 PLEKHG3A1L390 1219 aa10.86□□□□□ -0.67
CPSF4-202ENST00000412686 ABCA3Q99758 1704 aa10.86□□□□□ -0.67
CPSF4-202ENST00000412686 SPATA31A6Q5VVP1 1343 aa10.85□□□□□ -0.67
CPSF4-202ENST00000412686 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
CPSF4-202ENST00000412686 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
CPSF4-202ENST00000412686 SBNO1A3KN83 1393 aa10.85□□□□□ -0.67
CPSF4-202ENST00000412686 ATAD2Q6PL18 1390 aa10.85□□□□□ -0.67
CPSF4-202ENST00000412686 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-202ENST00000412686 CABLES1Q8TDN4 633 aa10.84□□□□□ -0.67
CPSF4-202ENST00000412686 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
CPSF4-202ENST00000412686 NRKQ7Z2Y5 1582 aa10.84□□□□□ -0.67
CPSF4-202ENST00000412686 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
CPSF4-202ENST00000412686 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
CPSF4-202ENST00000412686 ZBTB22O15209 634 aa10.83□□□□□ -0.68
CPSF4-202ENST00000412686 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
CPSF4-202ENST00000412686 EIF4G2P78344 907 aaKnown RBP eCLIP10.83□□□□□ -0.68
CPSF4-202ENST00000412686 TMC1Q8TDI8 760 aa10.83□□□□□ -0.68
CPSF4-202ENST00000412686 SLC12A5Q9H2X9 1139 aa10.83□□□□□ -0.68
CPSF4-202ENST00000412686 USP6P35125 1406 aa10.83□□□□□ -0.68
CPSF4-202ENST00000412686 MYOM1P52179 1685 aa10.82□□□□□ -0.68
CPSF4-202ENST00000412686 MARF1Q9Y4F3 1742 aaKnown RBP10.82□□□□□ -0.68
CPSF4-202ENST00000412686 TMF1P82094 1093 aa10.82□□□□□ -0.68
CPSF4-202ENST00000412686 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
CPSF4-202ENST00000412686 PHRF1Q9P1Y6 1649 aaKnown RBP10.81□□□□□ -0.68
CPSF4-202ENST00000412686 MEX3CQ5U5Q3 659 aaKnown RBP10.81□□□□□ -0.68
CPSF4-202ENST00000412686 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-202ENST00000412686 PIK3C2AO00443 1686 aa10.81□□□□□ -0.68
CPSF4-202ENST00000412686 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
CPSF4-202ENST00000412686 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
CPSF4-202ENST00000412686 A0A1W2PP64 1363 aa10.8□□□□□ -0.68
CPSF4-202ENST00000412686 ARHGEF10O15013 1369 aa10.8□□□□□ -0.68
CPSF4-202ENST00000412686 C8orf37Q96NL8 207 aa10.8□□□□□ -0.68
CPSF4-202ENST00000412686 POLR3GLQ9BT43 218 aa10.8□□□□□ -0.68
CPSF4-202ENST00000412686 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
CPSF4-202ENST00000412686 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-202ENST00000412686 MYCNP04198 464 aaPredicted RBP10.79□□□□□ -0.68
CPSF4-202ENST00000412686 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-202ENST00000412686 ABTB2Q8N961 1025 aa10.78□□□□□ -0.68
CPSF4-202ENST00000412686 PUS7Q96PZ0 661 aaKnown RBP10.78□□□□□ -0.68
CPSF4-202ENST00000412686 TTC21BQ7Z4L5 1316 aa10.78□□□□□ -0.68
CPSF4-202ENST00000412686 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-202ENST00000412686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPSF4-202ENST00000412686 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.69
CPSF4-202ENST00000412686 AFF2P51816 1311 aa10.77□□□□□ -0.69
CPSF4-202ENST00000412686 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
CPSF4-202ENST00000412686 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
CPSF4-202ENST00000412686 POTEAQ6S8J7 498 aa10.76□□□□□ -0.69
CPSF4-202ENST00000412686 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
CPSF4-202ENST00000412686 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-202ENST00000412686 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-202ENST00000412686 ANKRD36BQ8N2N9 1353 aa10.76□□□□□ -0.69
CPSF4-202ENST00000412686 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
CPSF4-202ENST00000412686 CDCA8Q53HL2 280 aa10.75□□□□□ -0.69
CPSF4-202ENST00000412686 NME9Q86XW9 330 aa10.75□□□□□ -0.69
CPSF4-202ENST00000412686 NGLY1Q96IV0 654 aa10.75□□□□□ -0.69
CPSF4-202ENST00000412686 BRD4O60885 1362 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-202ENST00000412686 EDC4Q6P2E9 1401 aaKnown RBP10.75□□□□□ -0.69
CPSF4-202ENST00000412686 SLIT3O75094 1523 aa10.74□□□□□ -0.69
CPSF4-202ENST00000412686 NLRP6P59044 892 aa10.74□□□□□ -0.69
CPSF4-202ENST00000412686 TERF2IPQ9NYB0 399 aa10.74□□□□□ -0.69
CPSF4-202ENST00000412686 USP19O94966 1318 aa10.74□□□□□ -0.69
CPSF4-202ENST00000412686 USP54Q70EL1 1684 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 NRAPQ86VF7 1730 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 SOX12O15370 315 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
CPSF4-202ENST00000412686 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 TTC21AQ8NDW8 1320 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 KIAA0232Q92628 1395 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 BCL9LQ86UU0 1499 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 SLIT2O94813 1529 aa10.73□□□□□ -0.69
CPSF4-202ENST00000412686 COL14A1Q05707 1796 aaKnown RBP10.72□□□□□ -0.69
CPSF4-202ENST00000412686 KIF20BQ96Q89 1820 aa10.72□□□□□ -0.69
CPSF4-202ENST00000412686 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
CPSF4-202ENST00000412686 CHRNA2Q15822 529 aa10.72□□□□□ -0.69
CPSF4-202ENST00000412686 FNBP4Q8N3X1 1017 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-202ENST00000412686 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
CPSF4-202ENST00000412686 USP21Q9UK80 565 aa10.72□□□□□ -0.69
CPSF4-202ENST00000412686 NSD3Q9BZ95 1437 aa10.72□□□□□ -0.69
CPSF4-202ENST00000412686 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 NFAT5O94916 1531 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 GCP02774 474 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
CPSF4-202ENST00000412686 USP31Q70CQ4 1352 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.71□□□□□ -0.69
CPSF4-202ENST00000412686 PRDM11Q9NQV5 511 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 NWD2Q9ULI1 1742 aa10.71□□□□□ -0.69
CPSF4-202ENST00000412686 LMO7Q8WWI1 1683 aa10.7□□□□□ -0.7
CPSF4-202ENST00000412686 WASHC2AQ641Q2 1341 aa10.7□□□□□ -0.7
CPSF4-202ENST00000412686 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
CPSF4-202ENST00000412686 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
CPSF4-202ENST00000412686 ATRNO75882 1429 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 CCDC7Q96M83 1385 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 LTN1O94822 1766 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 COL18A1P39060 1754 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms