RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 BIN2Q9UBW5 565 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 CREB3O43889 395 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 WHAMMQ8TF30 809 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 FEZ1Q99689 392 aa6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 CCDC94Q9BW85 323 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 TPX2Q9ULW0 747 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-204ENST00000410054 VASPP50552 380 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 TRERF1Q96PN7 1200 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 KIF2CQ99661 725 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 EIF3JO75822 258 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 IQCGQ9H095 443 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 CCDC172P0C7W6 258 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 CCDC73Q6ZRK6 1079 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 PROCA1Q8NCQ7 364 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 FLCNQ8NFG4 579 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 NOC3LQ8WTT2 800 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 FEZ2Q9UHY8 353 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 KIF1CO43896 1103 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 EFCC1Q9HA90 598 aa6.26□□□□□ -1.41
R3HDM1-204ENST00000410054 PMFBP1Q8TBY8 1022 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 GPBP1L1Q9HC44 474 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 PRM3Q9NNZ6 103 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 SATB2Q9UPW6 733 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 TRIM17Q9Y577 477 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 KIF3CO14782 793 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 CBX1P83916 185 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 RASSF4Q9H2L5 321 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 TRIM21P19474 475 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 PAX3P23760 479 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 ZNF131P52739 623 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 SETDB1Q15047 1291 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 PDCL2Q8N4E4 241 aa6.25□□□□□ -1.41
R3HDM1-204ENST00000410054 TTLL5Q6EMB2 1281 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 ARMC9Q7Z3E5 817 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 CCDC146Q8IYE0 955 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 RSRC1Q96IZ7 334 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 TRIM6Q9C030 488 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 PPP4R2Q9NY27 417 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 CEP104O60308 925 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 RAI14Q9P0K7 980 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 MCM6Q14566 821 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 MICALCLQ6ZW33 695 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 ACBD3Q9H3P7 528 aa6.24□□□□□ -1.41
R3HDM1-204ENST00000410054 SPATS2LQ9NUQ6 558 aaKnown RBP6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 NMIQ13287 307 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 ZKSCAN8Q15776 578 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 HDGFL2Q7Z4V5 671 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 RETREG2Q8NC44 543 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 NUP133Q8WUM0 1156 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 DIAPH3Q9NSV4 1193 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 EXOC1Q9NV70 894 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 DCAF1Q9Y4B6 1507 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 GOLGA6L9A6NEM1 432 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 HSP90B2PQ58FF3 399 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 ZNF830Q96NB3 372 aaPredicted RBP6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 GABBR1Q9UBS5 961 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 RABL2BQ9UNT1 228 aa6.23□□□□□ -1.41
R3HDM1-204ENST00000410054 KAT6BQ8WYB5 2073 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 PSMC1P62191 440 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 PSMD2Q13200 908 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 C16orf87Q6PH81 154 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 COMMD10Q9Y6G5 202 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 NEBLO76041 1014 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 S100BP04271 92 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 GTF2F1P35269 517 aaKnown RBP eCLIP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 NUCB1Q02818 461 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 ISM2Q6H9L7 571 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 UBE2Q1Q7Z7E8 422 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 ZNF280CQ8ND82 737 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 MRFAP1L1Q96HT8 127 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 ARGLU1Q9NWB6 273 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 UQCRHLA0A096LP55 91 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 UQCRHP07919 91 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 IKQ13123 557 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 RNF187Q5TA31 235 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 TSHZ1Q6ZSZ6 1077 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 GBP7Q8N8V2 638 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 VTI1AQ96AJ9 217 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 H0YC42 278 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 EPB41L2O43491 1005 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 RGL3Q3MIN7 710 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 UTP14CQ5TAP6 766 aaKnown RBP6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 RNF20Q5VTR2 975 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 JAKMIP3Q5VZ66 844 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 ANKRD18AQ8IVF6 992 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 DDX11Q96FC9 970 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 FAM184BQ9ULE4 1060 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 RABGAP1Q9Y3P9 1069 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 STK24Q9Y6E0 443 aa6.22□□□□□ -1.41
R3HDM1-204ENST00000410054 A0A1B0GUA9 196 aa6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 U2AF1L5P0DN76 240 aaPredicted RBP6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 U2AF1Q01081 240 aaKnown RBP eCLIP6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 PRPF4BQ13523 1007 aaKnown RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms