RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 BRD4O60885 1362 aaPredicted RBP31.32■■■□□ 2.6
PTCD3-203ENST00000409783 NRKQ7Z2Y5 1582 aa31.31■■■□□ 2.6
PTCD3-203ENST00000409783 PAK3O75914 559 aaPredicted RBP31.31■■■□□ 2.6
PTCD3-203ENST00000409783 LMOD2Q6P5Q4 547 aa31.31■■■□□ 2.6
PTCD3-203ENST00000409783 ZNF692Q9BU19 519 aaPredicted RBP31.3■■■□□ 2.6
PTCD3-203ENST00000409783 MARF1Q9Y4F3 1742 aaKnown RBP31.29■■■□□ 2.6
PTCD3-203ENST00000409783 TMC1Q8TDI8 760 aa31.29■■■□□ 2.6
PTCD3-203ENST00000409783 NINLQ9Y2I6 1382 aa31.29■■■□□ 2.6
PTCD3-203ENST00000409783 CDCA8Q53HL2 280 aa31.27■■■□□ 2.6
PTCD3-203ENST00000409783 CABLES1Q8TDN4 633 aa31.27■■■□□ 2.6
PTCD3-203ENST00000409783 RGS17Q9UGC6 210 aaPredicted RBP31.27■■■□□ 2.6
PTCD3-203ENST00000409783 MYOM1P52179 1685 aa31.26■■■□□ 2.6
PTCD3-203ENST00000409783 KTN1Q86UP2 1357 aaKnown RBP31.26■■■□□ 2.59
PTCD3-203ENST00000409783 ADAMTS2O95450 1211 aa31.24■■■□□ 2.59
PTCD3-203ENST00000409783 MEX3CQ5U5Q3 659 aaKnown RBP31.24■■■□□ 2.59
PTCD3-203ENST00000409783 A0A1W2PP64 1363 aa31.24■■■□□ 2.59
PTCD3-203ENST00000409783 PIK3C2AO00443 1686 aa31.23■■■□□ 2.59
PTCD3-203ENST00000409783 TTC21BQ7Z4L5 1316 aa31.23■■■□□ 2.59
PTCD3-203ENST00000409783 PHF23Q9BUL5 403 aaPredicted RBP31.22■■■□□ 2.59
PTCD3-203ENST00000409783 PHRF1Q9P1Y6 1649 aaKnown RBP31.21■■■□□ 2.59
PTCD3-203ENST00000409783 ABTB2Q8N961 1025 aa31.21■■■□□ 2.59
PTCD3-203ENST00000409783 TERF2IPQ9NYB0 399 aa31.21■■■□□ 2.59
PTCD3-203ENST00000409783 C11orf95C9JLR9 678 aaPredicted RBP31.2■■■□□ 2.59
PTCD3-203ENST00000409783 NUTM2GQ5VZR2 741 aa31.2■■■□□ 2.59
PTCD3-203ENST00000409783 HDGFL2Q7Z4V5 671 aaPredicted RBP31.2■■■□□ 2.59
PTCD3-203ENST00000409783 PLEKHG5O94827 1062 aa31.19■■■□□ 2.58
PTCD3-203ENST00000409783 C8orf37Q96NL8 207 aa31.18■■■□□ 2.58
PTCD3-203ENST00000409783 TTC21AQ8NDW8 1320 aa31.18■■■□□ 2.58
PTCD3-203ENST00000409783 ANKRD36BQ8N2N9 1353 aa31.17■■■□□ 2.58
PTCD3-203ENST00000409783 USP19O94966 1318 aa31.17■■■□□ 2.58
PTCD3-203ENST00000409783 EDC4Q6P2E9 1401 aaKnown RBP31.16■■■□□ 2.58
PTCD3-203ENST00000409783 AFF2P51816 1311 aa31.14■■■□□ 2.58
PTCD3-203ENST00000409783 HAP1P54257 671 aaPredicted RBP31.13■■■□□ 2.57
PTCD3-203ENST00000409783 NLRP13Q86W25 1043 aa31.13■■■□□ 2.57
PTCD3-203ENST00000409783 USP54Q70EL1 1684 aa31.13■■■□□ 2.57
PTCD3-203ENST00000409783 FNBP4Q8N3X1 1017 aaPredicted RBP31.12■■■□□ 2.57
PTCD3-203ENST00000409783 NGLY1Q96IV0 654 aa31.12■■■□□ 2.57
PTCD3-203ENST00000409783 SLIT3O75094 1523 aa31.12■■■□□ 2.57
PTCD3-203ENST00000409783 NLRP6P59044 892 aa31.11■■■□□ 2.57
PTCD3-203ENST00000409783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.11■■■□□ 2.57
PTCD3-203ENST00000409783 POTEAQ6S8J7 498 aa31.1■■■□□ 2.57
PTCD3-203ENST00000409783 SLIT2O94813 1529 aa31.09■■■□□ 2.57
PTCD3-203ENST00000409783 USP31Q70CQ4 1352 aa31.09■■■□□ 2.57
PTCD3-203ENST00000409783 PLCH1Q4KWH8 1693 aa31.08■■■□□ 2.57
PTCD3-203ENST00000409783 ZNF772Q68DY9 489 aaPredicted RBP31.07■■■□□ 2.56
PTCD3-203ENST00000409783 NME9Q86XW9 330 aa31.07■■■□□ 2.56
PTCD3-203ENST00000409783 ZRANB1Q9UGI0 708 aa31.07■■■□□ 2.56
PTCD3-203ENST00000409783 BCL9LQ86UU0 1499 aa31.07■■■□□ 2.56
PTCD3-203ENST00000409783 KIF7Q2M1P5 1343 aa31.06■■■□□ 2.56
PTCD3-203ENST00000409783 FAM83GA6ND36 823 aa31.06■■■□□ 2.56
PTCD3-203ENST00000409783 GCP02774 474 aa31.06■■■□□ 2.56
PTCD3-203ENST00000409783 POLR3GLQ9BT43 218 aa31.06■■■□□ 2.56
PTCD3-203ENST00000409783 COL14A1Q05707 1796 aaKnown RBP31.05■■■□□ 2.56
PTCD3-203ENST00000409783 CARD14Q9BXL6 1004 aa31.05■■■□□ 2.56
PTCD3-203ENST00000409783 NWD2Q9ULI1 1742 aa31.04■■■□□ 2.56
PTCD3-203ENST00000409783 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.04■■■□□ 2.56
PTCD3-203ENST00000409783 KIAA0232Q92628 1395 aa31.03■■■□□ 2.56
PTCD3-203ENST00000409783 ILDR2Q71H61 639 aa31.02■■■□□ 2.56
PTCD3-203ENST00000409783 USP21Q9UK80 565 aa31.02■■■□□ 2.56
PTCD3-203ENST00000409783 CPDO75976 1380 aa31.02■■■□□ 2.56
PTCD3-203ENST00000409783 OVOS2A0A0J9YW53 1432 aa31.01■■■□□ 2.55
PTCD3-203ENST00000409783 OVOS2Q6IE36 1432 aa31.01■■■□□ 2.55
PTCD3-203ENST00000409783 ZC3H6P61129 1189 aaKnown RBP31.01■■■□□ 2.55
PTCD3-203ENST00000409783 NFAT5O94916 1531 aa30.99■■■□□ 2.55
PTCD3-203ENST00000409783 NRAPQ86VF7 1730 aa30.99■■■□□ 2.55
PTCD3-203ENST00000409783 PRDM11Q9NQV5 511 aa30.99■■■□□ 2.55
PTCD3-203ENST00000409783 ATRNO75882 1429 aa30.98■■■□□ 2.55
PTCD3-203ENST00000409783 NSD3Q9BZ95 1437 aa30.98■■■□□ 2.55
PTCD3-203ENST00000409783 KIF20BQ96Q89 1820 aa30.97■■■□□ 2.55
PTCD3-203ENST00000409783 LMO7Q8WWI1 1683 aa30.97■■■□□ 2.55
PTCD3-203ENST00000409783 CCDC7Q96M83 1385 aa30.96■■■□□ 2.55
PTCD3-203ENST00000409783 FYB1O15117 783 aa30.96■■■□□ 2.55
PTCD3-203ENST00000409783 ZEB1P37275 1124 aaPredicted RBP30.96■■■□□ 2.55
PTCD3-203ENST00000409783 UNC5CLQ8IV45 518 aa30.96■■■□□ 2.55
PTCD3-203ENST00000409783 QTRT2Q9H974 415 aaKnown RBP30.96■■■□□ 2.55
PTCD3-203ENST00000409783 WASHC2AQ641Q2 1341 aa30.96■■■□□ 2.55
PTCD3-203ENST00000409783 CHRNA2Q15822 529 aa30.95■■■□□ 2.55
PTCD3-203ENST00000409783 KCNH5Q8NCM2 988 aa30.94■■■□□ 2.54
PTCD3-203ENST00000409783 COL18A1P39060 1754 aa30.94■■■□□ 2.54
PTCD3-203ENST00000409783 PANK3Q9H999 370 aa30.93■■■□□ 2.54
PTCD3-203ENST00000409783 BTG4Q9NY30 223 aa30.93■■■□□ 2.54
PTCD3-203ENST00000409783 TRPC5Q9UL62 973 aaPredicted RBP30.92■■■□□ 2.54
PTCD3-203ENST00000409783 CAMTA1Q9Y6Y1 1673 aa30.91■■■□□ 2.54
PTCD3-203ENST00000409783 ARHGEF25Q86VW2 580 aa30.9■■■□□ 2.54
PTCD3-203ENST00000409783 SOX12O15370 315 aa30.89■■■□□ 2.54
PTCD3-203ENST00000409783 GGNBP2Q9H3C7 697 aa30.89■■■□□ 2.54
PTCD3-203ENST00000409783 AATKQ6ZMQ8 1374 aa30.89■■■□□ 2.54
PTCD3-203ENST00000409783 COG3Q96JB2 828 aa30.88■■■□□ 2.53
PTCD3-203ENST00000409783 RXRBP28702 533 aa30.87■■■□□ 2.53
PTCD3-203ENST00000409783 LTN1O94822 1766 aa30.87■■■□□ 2.53
PTCD3-203ENST00000409783 RBM6P78332 1123 aaKnown RBP30.86■■■□□ 2.53
PTCD3-203ENST00000409783 VPS72Q15906 364 aa30.86■■■□□ 2.53
PTCD3-203ENST00000409783 GLI3P10071 1580 aa30.86■■■□□ 2.53
PTCD3-203ENST00000409783 RGPD5Q99666 1765 aa30.84■■■□□ 2.53
PTCD3-203ENST00000409783 CGNL1Q0VF96 1302 aa30.84■■■□□ 2.53
PTCD3-203ENST00000409783 GJD4Q96KN9 370 aaPredicted RBP30.83■■■□□ 2.53
PTCD3-203ENST00000409783 CDK12Q9NYV4 1490 aaPredicted RBP30.82■■■□□ 2.53
PTCD3-203ENST00000409783 ANKRD26Q9UPS8 1709 aa30.82■■■□□ 2.52
PTCD3-203ENST00000409783 ABCC6O95255 1503 aa30.82■■■□□ 2.52
PTCD3-203ENST00000409783 ZBTB7CA1YPR0 619 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms