RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 ACIN1Q9UKV3 1341 aaKnown RBP25.04■■□□□ 1.6
SCRN1-203ENST00000409570 GPRASP1Q5JY77 1395 aa25.04■■□□□ 1.6
SCRN1-203ENST00000409570 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
SCRN1-203ENST00000409570 HRCP23327 699 aa25.02■■□□□ 1.6
SCRN1-203ENST00000409570 SPATA31A5Q5VU36 1347 aa25.02■■□□□ 1.6
SCRN1-203ENST00000409570 SPATA31A7Q8IWB4 1347 aa25.02■■□□□ 1.6
SCRN1-203ENST00000409570 MINK1Q8N4C8 1332 aaPredicted RBP25.02■■□□□ 1.6
SCRN1-203ENST00000409570 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
SCRN1-203ENST00000409570 EN1Q05925 392 aaPredicted RBP25.01■■□□□ 1.59
SCRN1-203ENST00000409570 FAM182BQ5T319 152 aa25■■□□□ 1.59
SCRN1-203ENST00000409570 ITSN1Q15811 1721 aa24.99■■□□□ 1.59
SCRN1-203ENST00000409570 WASLO00401 505 aaPredicted RBP24.98■■□□□ 1.59
SCRN1-203ENST00000409570 DISP2A7MBM2 1401 aa24.97■■□□□ 1.59
SCRN1-203ENST00000409570 ARHGEF28Q8N1W1 1705 aaKnown RBP24.96■■□□□ 1.59
SCRN1-203ENST00000409570 PHRF1Q9P1Y6 1649 aaKnown RBP24.96■■□□□ 1.59
SCRN1-203ENST00000409570 NGDNQ8NEJ9 315 aaKnown RBP24.95■■□□□ 1.58
SCRN1-203ENST00000409570 PAK3O75914 559 aaPredicted RBP24.94■■□□□ 1.58
SCRN1-203ENST00000409570 PRDM11Q9NQV5 511 aa24.94■■□□□ 1.58
SCRN1-203ENST00000409570 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
SCRN1-203ENST00000409570 RAB3GAP2Q9H2M9 1393 aa24.93■■□□□ 1.58
SCRN1-203ENST00000409570 ATP7BP35670 1465 aa24.92■■□□□ 1.58
SCRN1-203ENST00000409570 SPATA31A1Q5TZJ5 1347 aa24.91■■□□□ 1.58
SCRN1-203ENST00000409570 R3HDM1Q15032 1099 aaKnown RBP24.91■■□□□ 1.58
SCRN1-203ENST00000409570 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
SCRN1-203ENST00000409570 DCAF11Q8TEB1 546 aa24.9■■□□□ 1.58
SCRN1-203ENST00000409570 EZH2Q15910 746 aaKnown RBP24.89■■□□□ 1.58
SCRN1-203ENST00000409570 CHRNA2Q15822 529 aa24.88■■□□□ 1.57
SCRN1-203ENST00000409570 NUDT16Q96DE0 195 aaKnown RBP24.87■■□□□ 1.57
SCRN1-203ENST00000409570 TOPAZ1Q8N9V7 1692 aa24.87■■□□□ 1.57
SCRN1-203ENST00000409570 CAMKK2Q96RR4 588 aa24.86■■□□□ 1.57
SCRN1-203ENST00000409570 RREB1Q92766 1687 aa24.85■■□□□ 1.57
SCRN1-203ENST00000409570 TRIM37O94972 964 aa24.85■■□□□ 1.57
SCRN1-203ENST00000409570 FAM196AQ6ZSG2 479 aa24.85■■□□□ 1.57
SCRN1-203ENST00000409570 STRN4Q9NRL3 753 aa24.85■■□□□ 1.57
SCRN1-203ENST00000409570 STAC3Q96MF2 364 aa24.84■■□□□ 1.57
SCRN1-203ENST00000409570 ZC3H6P61129 1189 aaKnown RBP24.83■■□□□ 1.57
SCRN1-203ENST00000409570 NUTM2GQ5VZR2 741 aa24.82■■□□□ 1.56
SCRN1-203ENST00000409570 NUP188Q5SRE5 1749 aa24.81■■□□□ 1.56
SCRN1-203ENST00000409570 NRKQ7Z2Y5 1582 aa24.81■■□□□ 1.56
SCRN1-203ENST00000409570 POLR3AO14802 1390 aaPredicted RBP24.8■■□□□ 1.56
SCRN1-203ENST00000409570 SSH2Q76I76 1423 aa24.8■■□□□ 1.56
SCRN1-203ENST00000409570 CDK19Q9BWU1 502 aa24.8■■□□□ 1.56
SCRN1-203ENST00000409570 LMO7Q8WWI1 1683 aa24.8■■□□□ 1.56
SCRN1-203ENST00000409570 PARD3Q8TEW0 1356 aa24.8■■□□□ 1.56
SCRN1-203ENST00000409570 CAMTA1Q9Y6Y1 1673 aa24.79■■□□□ 1.56
SCRN1-203ENST00000409570 APBA3O96018 575 aa24.79■■□□□ 1.56
SCRN1-203ENST00000409570 BARGINQ6ZT62 677 aa24.79■■□□□ 1.56
SCRN1-203ENST00000409570 USP35Q9P2H5 1018 aa24.78■■□□□ 1.56
SCRN1-203ENST00000409570 ACEP12821 1306 aa24.78■■□□□ 1.56
SCRN1-203ENST00000409570 NBPF8Q3BBV2 869 aa24.77■■□□□ 1.56
SCRN1-203ENST00000409570 EVA1CP58658 441 aa24.76■■□□□ 1.55
SCRN1-203ENST00000409570 KIAA1210Q9ULL0 1709 aa24.75■■□□□ 1.55
SCRN1-203ENST00000409570 CCDC61Q9Y6R9 512 aa24.75■■□□□ 1.55
SCRN1-203ENST00000409570 PLEKHG3A1L390 1219 aa24.74■■□□□ 1.55
SCRN1-203ENST00000409570 PDE3BQ13370 1112 aa24.74■■□□□ 1.55
SCRN1-203ENST00000409570 LARP1Q6PKG0 1096 aaKnown RBP24.74■■□□□ 1.55
SCRN1-203ENST00000409570 PARP4Q9UKK3 1724 aaKnown RBP24.74■■□□□ 1.55
SCRN1-203ENST00000409570 CPDO75976 1380 aa24.73■■□□□ 1.55
SCRN1-203ENST00000409570 USP19O94966 1318 aa24.72■■□□□ 1.55
SCRN1-203ENST00000409570 TCP11L2Q8N4U5 519 aa24.72■■□□□ 1.55
SCRN1-203ENST00000409570 ABTB2Q8N961 1025 aa24.71■■□□□ 1.55
SCRN1-203ENST00000409570 SBF2Q86WG5 1849 aa24.7■■□□□ 1.54
SCRN1-203ENST00000409570 THRAP3Q9Y2W1 955 aaKnown RBP24.67■■□□□ 1.54
SCRN1-203ENST00000409570 PEAK1Q9H792 1746 aa24.66■■□□□ 1.54
SCRN1-203ENST00000409570 COL5A2P05997 1499 aaPredicted RBP24.66■■□□□ 1.54
SCRN1-203ENST00000409570 NBPF14Q5TI25 921 aa24.66■■□□□ 1.54
SCRN1-203ENST00000409570 GCP02774 474 aa24.65■■□□□ 1.54
SCRN1-203ENST00000409570 NLRP13Q86W25 1043 aa24.65■■□□□ 1.54
SCRN1-203ENST00000409570 PPIP5K1Q6PFW1 1433 aa24.64■■□□□ 1.54
SCRN1-203ENST00000409570 RGPD3A6NKT7 1758 aaPredicted RBP24.64■■□□□ 1.53
SCRN1-203ENST00000409570 RGPD4Q7Z3J3 1758 aa24.64■■□□□ 1.53
SCRN1-203ENST00000409570 NBPF1Q3BBV0 1214 aa24.63■■□□□ 1.53
SCRN1-203ENST00000409570 LRRC37A3O60309 1634 aa24.61■■□□□ 1.53
SCRN1-203ENST00000409570 WNK3Q9BYP7 1800 aa24.61■■□□□ 1.53
SCRN1-203ENST00000409570 CRB1P82279 1406 aa24.61■■□□□ 1.53
SCRN1-203ENST00000409570 COL18A1P39060 1754 aa24.6■■□□□ 1.53
SCRN1-203ENST00000409570 QRICH2Q9H0J4 1663 aa24.6■■□□□ 1.53
SCRN1-203ENST00000409570 SRPK2P78362 688 aaKnown RBP24.59■■□□□ 1.53
SCRN1-203ENST00000409570 BRD4O60885 1362 aaPredicted RBP24.58■■□□□ 1.53
SCRN1-203ENST00000409570 SLIT3O75094 1523 aa24.58■■□□□ 1.53
SCRN1-203ENST00000409570 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
SCRN1-203ENST00000409570 SPON1Q9HCB6 807 aa24.58■■□□□ 1.53
SCRN1-203ENST00000409570 CABP2Q9NPB3 220 aa24.58■■□□□ 1.53
SCRN1-203ENST00000409570 OVOS2A0A0G2JMS6 1433 aa24.58■■□□□ 1.53
SCRN1-203ENST00000409570 OVOS2A0A0J9YW53 1432 aa24.58■■□□□ 1.53
SCRN1-203ENST00000409570 OVOS2Q6IE36 1432 aa24.58■■□□□ 1.53
SCRN1-203ENST00000409570 KCNQ2O43526 872 aa24.57■■□□□ 1.52
SCRN1-203ENST00000409570 YY1P25490 414 aa24.57■■□□□ 1.52
SCRN1-203ENST00000409570 CENPJQ9HC77 1338 aaPredicted RBP24.57■■□□□ 1.52
SCRN1-203ENST00000409570 RGPD5Q99666 1765 aa24.56■■□□□ 1.52
SCRN1-203ENST00000409570 AATKQ6ZMQ8 1374 aa24.55■■□□□ 1.52
SCRN1-203ENST00000409570 AKAP12Q02952 1782 aa24.55■■□□□ 1.52
SCRN1-203ENST00000409570 CASZ1Q86V15 1759 aa24.55■■□□□ 1.52
SCRN1-203ENST00000409570 USP6P35125 1406 aa24.55■■□□□ 1.52
SCRN1-203ENST00000409570 PIK3C2AO00443 1686 aa24.55■■□□□ 1.52
SCRN1-203ENST00000409570 ZBTB7CA1YPR0 619 aa24.54■■□□□ 1.52
SCRN1-203ENST00000409570 PPP1R1BQ9UD71 204 aaPredicted RBP24.54■■□□□ 1.52
SCRN1-203ENST00000409570 PLSCR1O15162 318 aa24.53■■□□□ 1.52
SCRN1-203ENST00000409570 NLRP6P59044 892 aa24.53■■□□□ 1.52
SCRN1-203ENST00000409570 NINLQ9Y2I6 1382 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms