RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 MMP16P51512 607 aa5.17□□□□□ -1.58
CUL3-203ENST00000409096 PTCRAQ6ISU1 281 aaPredicted RBP5.17□□□□□ -1.58
CUL3-203ENST00000409096 OCSTAMPQ9BR26 566 aa5.17□□□□□ -1.58
CUL3-203ENST00000409096 ADH1BP00325 375 aa5.17□□□□□ -1.58
CUL3-203ENST00000409096 WASHC4Q2M389 1173 aa5.17□□□□□ -1.58
CUL3-203ENST00000409096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.17□□□□□ -1.58
CUL3-203ENST00000409096 EVA1BQ9NVM1 165 aa5.17□□□□□ -1.58
CUL3-203ENST00000409096 MYT1LQ9UL68 1186 aa5.17□□□□□ -1.58
CUL3-203ENST00000409096 S1PR4O95977 384 aa5.16□□□□□ -1.58
CUL3-203ENST00000409096 CFAP70Q5T0N1 1121 aa5.16□□□□□ -1.58
CUL3-203ENST00000409096 CCDC24Q8N4L8 307 aa5.16□□□□□ -1.58
CUL3-203ENST00000409096 PIK3CDO00329 1044 aa5.16□□□□□ -1.58
CUL3-203ENST00000409096 KCNH2Q12809 1159 aa5.15□□□□□ -1.58
CUL3-203ENST00000409096 CARNS1A5YM72 827 aa5.15□□□□□ -1.59
CUL3-203ENST00000409096 PALM3A6NDB9 673 aaPredicted RBP5.15□□□□□ -1.59
CUL3-203ENST00000409096 ZBBXA8MT70 800 aa5.15□□□□□ -1.59
CUL3-203ENST00000409096 PPEF1O14829 653 aaPredicted RBP5.15□□□□□ -1.59
CUL3-203ENST00000409096 RETREG2Q8NC44 543 aa5.15□□□□□ -1.59
CUL3-203ENST00000409096 PPP1R12CQ9BZL4 782 aa5.15□□□□□ -1.59
CUL3-203ENST00000409096 IL21Q9HBE4 155 aa5.15□□□□□ -1.59
CUL3-203ENST00000409096 NR1H3Q13133 447 aa5.14□□□□□ -1.59
CUL3-203ENST00000409096 TBC1D9Q6ZT07 1266 aa5.14□□□□□ -1.59
CUL3-203ENST00000409096 NYAP1Q6ZVC0 841 aa5.14□□□□□ -1.59
CUL3-203ENST00000409096 SLC6A16Q9GZN6 736 aa5.14□□□□□ -1.59
CUL3-203ENST00000409096 UNC93B1Q9H1C4 597 aa5.14□□□□□ -1.59
CUL3-203ENST00000409096 FCF1Q9Y324 198 aaKnown RBP5.14□□□□□ -1.59
CUL3-203ENST00000409096 TRIM26Q12899 539 aaPredicted RBP5.14□□□□□ -1.59
CUL3-203ENST00000409096 TFIP11Q9UBB9 837 aaKnown RBP5.14□□□□□ -1.59
CUL3-203ENST00000409096 CDCA8Q53HL2 280 aa5.13□□□□□ -1.59
CUL3-203ENST00000409096 SEMA3FQ13275 785 aa5.13□□□□□ -1.59
CUL3-203ENST00000409096 LINC01559Q495D7 138 aa5.13□□□□□ -1.59
CUL3-203ENST00000409096 LMOD1P29536 600 aaPredicted RBP5.12□□□□□ -1.59
CUL3-203ENST00000409096 CARD14Q9BXL6 1004 aa5.12□□□□□ -1.59
CUL3-203ENST00000409096 SRPK2P78362 688 aaKnown RBP5.12□□□□□ -1.59
CUL3-203ENST00000409096 FAM174AQ8TBP5 190 aa5.12□□□□□ -1.59
CUL3-203ENST00000409096 MAGEB6P1A0A0J9YX57 407 aa5.11□□□□□ -1.59
CUL3-203ENST00000409096 EIF4G2P78344 907 aaKnown RBP eCLIP5.11□□□□□ -1.59
CUL3-203ENST00000409096 C4orf48Q5BLP8 95 aa5.11□□□□□ -1.59
CUL3-203ENST00000409096 PLA2G2CQ5R387 149 aa5.11□□□□□ -1.59
CUL3-203ENST00000409096 DEPDC4Q8N2C3 294 aa5.11□□□□□ -1.59
CUL3-203ENST00000409096 ADAM32Q8TC27 787 aa5.11□□□□□ -1.59
CUL3-203ENST00000409096 MAFBQ9Y5Q3 323 aaPredicted RBP5.11□□□□□ -1.59
CUL3-203ENST00000409096 SPNS2Q8IVW8 549 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 BAP1Q92560 729 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 FOXJ1Q92949 421 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 RNF166Q96A37 237 aaPredicted RBP5.1□□□□□ -1.59
CUL3-203ENST00000409096 PDXDC2PQ6P474 469 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 SH3BP5LQ7L8J4 393 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 PBXIP1Q96AQ6 731 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 PCDHB9Q9Y5E1 797 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 SOX11P35716 441 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 TSGA10IPQ3SY00 556 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 NBPF14Q5TI25 921 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 PNMA1Q8ND90 353 aa5.1□□□□□ -1.59
CUL3-203ENST00000409096 ZC3H4Q9UPT8 1303 aaKnown RBP5.09□□□□□ -1.59
CUL3-203ENST00000409096 RNF223E7ERA6 249 aa5.09□□□□□ -1.59
CUL3-203ENST00000409096 PDIA4P13667 645 aaKnown RBP5.09□□□□□ -1.59
CUL3-203ENST00000409096 SH3RF1Q7Z6J0 888 aa5.09□□□□□ -1.59
CUL3-203ENST00000409096 ARHGAP9Q9BRR9 750 aa5.09□□□□□ -1.59
CUL3-203ENST00000409096 PTK2Q05397 1052 aa5.09□□□□□ -1.6
CUL3-203ENST00000409096 ATP9BO43861 1147 aa5.08□□□□□ -1.6
CUL3-203ENST00000409096 ZNF511Q8NB15 262 aa5.08□□□□□ -1.6
CUL3-203ENST00000409096 CEP126Q9P2H0 1117 aa5.08□□□□□ -1.6
CUL3-203ENST00000409096 SKIP12755 728 aa5.08□□□□□ -1.6
CUL3-203ENST00000409096 AGERQ15109 404 aa5.08□□□□□ -1.6
CUL3-203ENST00000409096 ERFEQ4G0M1 354 aa5.08□□□□□ -1.6
CUL3-203ENST00000409096 ZBTB33Q86T24 672 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 ARMC2Q8NEN0 867 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 PODXL2Q9NZ53 605 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 USP17L3A6NCW0 530 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 USP17L4A6NCW7 530 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 USP17L5A8MUK1 530 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 PPP1R15AO75807 674 aaPredicted RBP5.07□□□□□ -1.6
CUL3-203ENST00000409096 ITGBL1O95965 494 aaPredicted RBP5.07□□□□□ -1.6
CUL3-203ENST00000409096 SH3BP2P78314 561 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 KCNC4Q03721 635 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 USP17L2Q6R6M4 530 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 USP17L1Q7RTZ2 530 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 GPSM3Q9Y4H4 160 aa5.07□□□□□ -1.6
CUL3-203ENST00000409096 NCOA4Q13772 614 aa5.06□□□□□ -1.6
CUL3-203ENST00000409096 KANK4Q5T7N3 995 aaPredicted RBP5.06□□□□□ -1.6
CUL3-203ENST00000409096 GPKOWQ92917 476 aaPredicted RBP eCLIP5.06□□□□□ -1.65e-7■■□□□ 13
CUL3-203ENST00000409096 HCSTQ9UBK5 93 aa5.06□□□□□ -1.6
CUL3-203ENST00000409096 SKOR1P84550 965 aa5.06□□□□□ -1.6
CUL3-203ENST00000409096 PPP1R18Q6NYC8 613 aa5.06□□□□□ -1.6
CUL3-203ENST00000409096 PHTF2Q8N3S3 785 aa5.06□□□□□ -1.6
CUL3-203ENST00000409096 TRIM32Q13049 653 aa5.05□□□□□ -1.6
CUL3-203ENST00000409096 RNF135Q8IUD6 432 aa5.05□□□□□ -1.6
CUL3-203ENST00000409096 GIGYF1O75420 1035 aaPredicted RBP5.05□□□□□ -1.6
CUL3-203ENST00000409096 CRTC2Q53ET0 693 aaPredicted RBP5.05□□□□□ -1.6
CUL3-203ENST00000409096 AEBP1Q8IUX7 1158 aa5.05□□□□□ -1.6
CUL3-203ENST00000409096 STK32AQ8WU08 396 aa5.05□□□□□ -1.6
CUL3-203ENST00000409096 EMID1Q96A84 441 aaPredicted RBP5.05□□□□□ -1.6
CUL3-203ENST00000409096 CCDC85AQ96PX6 553 aaPredicted RBP5.05□□□□□ -1.6
CUL3-203ENST00000409096 ZMIZ1Q9ULJ6 1067 aa5.05□□□□□ -1.6
CUL3-203ENST00000409096 SLFNL1Q499Z3 407 aa5.04□□□□□ -1.6
CUL3-203ENST00000409096 BPHLQ86WA6 291 aaPredicted RBP5.04□□□□□ -1.6
CUL3-203ENST00000409096 DZIP3Q86Y13 1208 aaKnown RBP5.04□□□□□ -1.6
CUL3-203ENST00000409096 PLPP7Q8NBV4 271 aa5.04□□□□□ -1.6
CUL3-203ENST00000409096 RAB15P59190 212 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms