RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 NGLY1Q96IV0 654 aa18.9■□□□□ 0.62
IFITM1-202ENST00000408968 ATAD2Q6PL18 1390 aa18.9■□□□□ 0.62
IFITM1-202ENST00000408968 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.62
IFITM1-202ENST00000408968 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
IFITM1-202ENST00000408968 PLEKHG3A1L390 1219 aa18.89■□□□□ 0.61
IFITM1-202ENST00000408968 SLC24A1O60721 1099 aa18.89■□□□□ 0.61
IFITM1-202ENST00000408968 HAP1P54257 671 aaPredicted RBP18.89■□□□□ 0.61
IFITM1-202ENST00000408968 COL14A1Q05707 1796 aaKnown RBP18.87■□□□□ 0.61
IFITM1-202ENST00000408968 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
IFITM1-202ENST00000408968 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
IFITM1-202ENST00000408968 ACEP12821 1306 aa18.85■□□□□ 0.61
IFITM1-202ENST00000408968 RXRBP28702 533 aa18.85■□□□□ 0.61
IFITM1-202ENST00000408968 SLIT2O94813 1529 aa18.84■□□□□ 0.61
IFITM1-202ENST00000408968 MON2Q7Z3U7 1717 aa18.84■□□□□ 0.61
IFITM1-202ENST00000408968 USP21Q9UK80 565 aa18.84■□□□□ 0.61
IFITM1-202ENST00000408968 TRPC5Q9UL62 973 aaPredicted RBP18.84■□□□□ 0.61
IFITM1-202ENST00000408968 ATRNO75882 1429 aa18.83■□□□□ 0.61
IFITM1-202ENST00000408968 CABP2Q9NPB3 220 aa18.83■□□□□ 0.6
IFITM1-202ENST00000408968 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.6
IFITM1-202ENST00000408968 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
IFITM1-202ENST00000408968 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
IFITM1-202ENST00000408968 NRAPQ86VF7 1730 aa18.82■□□□□ 0.6
IFITM1-202ENST00000408968 USP6P35125 1406 aa18.82■□□□□ 0.6
IFITM1-202ENST00000408968 BCL9LQ86UU0 1499 aa18.8■□□□□ 0.6
IFITM1-202ENST00000408968 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
IFITM1-202ENST00000408968 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
IFITM1-202ENST00000408968 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
IFITM1-202ENST00000408968 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
IFITM1-202ENST00000408968 PIK3C2AO00443 1686 aa18.78■□□□□ 0.6
IFITM1-202ENST00000408968 RGS12O14924 1447 aa18.77■□□□□ 0.6
IFITM1-202ENST00000408968 USP54Q70EL1 1684 aa18.77■□□□□ 0.6
IFITM1-202ENST00000408968 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
IFITM1-202ENST00000408968 USP47Q96K76 1375 aa18.77■□□□□ 0.6
IFITM1-202ENST00000408968 UNC5CLQ8IV45 518 aa18.76■□□□□ 0.59
IFITM1-202ENST00000408968 CABP1Q9NZU7 370 aa18.76■□□□□ 0.59
IFITM1-202ENST00000408968 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
IFITM1-202ENST00000408968 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
IFITM1-202ENST00000408968 USP19O94966 1318 aa18.74■□□□□ 0.59
IFITM1-202ENST00000408968 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
IFITM1-202ENST00000408968 SLIT3O75094 1523 aa18.74■□□□□ 0.59
IFITM1-202ENST00000408968 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
IFITM1-202ENST00000408968 ABTB2Q8N961 1025 aa18.74■□□□□ 0.59
IFITM1-202ENST00000408968 SSH2Q76I76 1423 aa18.74■□□□□ 0.59
IFITM1-202ENST00000408968 GLI3P10071 1580 aa18.73■□□□□ 0.59
IFITM1-202ENST00000408968 CPDO75976 1380 aa18.72■□□□□ 0.59
IFITM1-202ENST00000408968 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
IFITM1-202ENST00000408968 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
IFITM1-202ENST00000408968 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
IFITM1-202ENST00000408968 ABCC6O95255 1503 aa18.7■□□□□ 0.58
IFITM1-202ENST00000408968 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
IFITM1-202ENST00000408968 VPS72Q15906 364 aa18.7■□□□□ 0.58
IFITM1-202ENST00000408968 CDCA8Q53HL2 280 aa18.7■□□□□ 0.58
IFITM1-202ENST00000408968 GJD4Q96KN9 370 aaPredicted RBP18.7■□□□□ 0.58
IFITM1-202ENST00000408968 EDC4Q6P2E9 1401 aaKnown RBP18.69■□□□□ 0.58
IFITM1-202ENST00000408968 HDGFL2Q7Z4V5 671 aaPredicted RBP18.69■□□□□ 0.58
IFITM1-202ENST00000408968 TESK2Q96S53 571 aa18.69■□□□□ 0.58
IFITM1-202ENST00000408968 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
IFITM1-202ENST00000408968 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
IFITM1-202ENST00000408968 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
IFITM1-202ENST00000408968 TMF1P82094 1093 aa18.68■□□□□ 0.58
IFITM1-202ENST00000408968 CD163L1Q9NR16 1453 aa18.67■□□□□ 0.58
IFITM1-202ENST00000408968 FAM83GA6ND36 823 aa18.67■□□□□ 0.58
IFITM1-202ENST00000408968 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
IFITM1-202ENST00000408968 TTC21BQ7Z4L5 1316 aa18.66■□□□□ 0.58
IFITM1-202ENST00000408968 NLRP6P59044 892 aa18.65■□□□□ 0.58
IFITM1-202ENST00000408968 BRWD3Q6RI45 1802 aa18.65■□□□□ 0.58
IFITM1-202ENST00000408968 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
IFITM1-202ENST00000408968 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
IFITM1-202ENST00000408968 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
IFITM1-202ENST00000408968 CCDC9Q9Y3X0 531 aaKnown RBP18.64■□□□□ 0.57
IFITM1-202ENST00000408968 A0A1W2PP64 1363 aa18.64■□□□□ 0.57
IFITM1-202ENST00000408968 MYOM1P52179 1685 aa18.63■□□□□ 0.57
IFITM1-202ENST00000408968 GCP02774 474 aa18.63■□□□□ 0.57
IFITM1-202ENST00000408968 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
IFITM1-202ENST00000408968 USP31Q70CQ4 1352 aa18.62■□□□□ 0.57
IFITM1-202ENST00000408968 ANKRD36BQ8N2N9 1353 aa18.62■□□□□ 0.57
IFITM1-202ENST00000408968 NFAT5O94916 1531 aa18.62■□□□□ 0.57
IFITM1-202ENST00000408968 KIF20BQ96Q89 1820 aa18.61■□□□□ 0.57
IFITM1-202ENST00000408968 LTN1O94822 1766 aa18.61■□□□□ 0.57
IFITM1-202ENST00000408968 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
IFITM1-202ENST00000408968 COL18A1P39060 1754 aa18.6■□□□□ 0.57
IFITM1-202ENST00000408968 AATKQ6ZMQ8 1374 aa18.6■□□□□ 0.57
IFITM1-202ENST00000408968 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
IFITM1-202ENST00000408968 COL5A2P05997 1499 aaPredicted RBP18.59■□□□□ 0.57
IFITM1-202ENST00000408968 WNK3Q9BYP7 1800 aa18.59■□□□□ 0.57
IFITM1-202ENST00000408968 SPATA31A5Q5VU36 1347 aa18.58■□□□□ 0.57
IFITM1-202ENST00000408968 SPATA31A7Q8IWB4 1347 aa18.58■□□□□ 0.57
IFITM1-202ENST00000408968 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
IFITM1-202ENST00000408968 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
IFITM1-202ENST00000408968 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
IFITM1-202ENST00000408968 EIF4G2P78344 907 aaKnown RBP eCLIP18.57■□□□□ 0.56
IFITM1-202ENST00000408968 CHRNA2Q15822 529 aa18.57■□□□□ 0.56
IFITM1-202ENST00000408968 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
IFITM1-202ENST00000408968 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
IFITM1-202ENST00000408968 UPF1Q92900 1129 aaKnown RBP eCLIP18.56■□□□□ 0.56
IFITM1-202ENST00000408968 PARP4Q9UKK3 1724 aaKnown RBP18.56■□□□□ 0.56
IFITM1-202ENST00000408968 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
IFITM1-202ENST00000408968 EVA1CP58658 441 aa18.55■□□□□ 0.56
IFITM1-202ENST00000408968 CRB1P82279 1406 aa18.55■□□□□ 0.56
IFITM1-202ENST00000408968 SPATA31A1Q5TZJ5 1347 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms