RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 BRINP3Q76B58 766 aa27.84■■■□□ 2.05
CHKB-201ENST00000406938 GGNBP2Q9H3C7 697 aa27.84■■■□□ 2.05
CHKB-201ENST00000406938 ANKRD26Q9UPS8 1709 aa27.83■■■□□ 2.05
CHKB-201ENST00000406938 NME9Q86XW9 330 aa27.83■■■□□ 2.05
CHKB-201ENST00000406938 PSME1Q06323 249 aa27.82■■■□□ 2.04
CHKB-201ENST00000406938 TTC21AQ8NDW8 1320 aa27.81■■■□□ 2.04
CHKB-201ENST00000406938 BRD4O60885 1362 aaPredicted RBP27.81■■■□□ 2.04
CHKB-201ENST00000406938 MYBBP1AQ9BQG0 1328 aaKnown RBP27.8■■■□□ 2.04
CHKB-201ENST00000406938 MORC1Q86VD1 984 aa27.8■■■□□ 2.04
CHKB-201ENST00000406938 XPCQ01831 940 aaPredicted RBP27.79■■■□□ 2.04
CHKB-201ENST00000406938 IQSEC2Q5JU85 1478 aa27.79■■■□□ 2.04
CHKB-201ENST00000406938 NPHP3Q7Z494 1330 aa27.78■■■□□ 2.04
CHKB-201ENST00000406938 PIK3C2AO00443 1686 aa27.78■■■□□ 2.04
CHKB-201ENST00000406938 DDX17Q92841 729 aaKnown RBP27.78■■■□□ 2.04
CHKB-201ENST00000406938 TRPM3Q9HCF6 1732 aaPredicted RBP27.77■■■□□ 2.04
CHKB-201ENST00000406938 PAK3O75914 559 aaPredicted RBP27.77■■■□□ 2.04
CHKB-201ENST00000406938 ZRANB1Q9UGI0 708 aa27.77■■■□□ 2.04
CHKB-201ENST00000406938 CCER2I3L3R5 266 aa27.76■■■□□ 2.03
CHKB-201ENST00000406938 PXDNQ92626 1479 aa27.75■■■□□ 2.03
CHKB-201ENST00000406938 KRT28Q7Z3Y7 464 aa27.75■■■□□ 2.03
CHKB-201ENST00000406938 OVOS2A0A0J9YW53 1432 aa27.75■■■□□ 2.03
CHKB-201ENST00000406938 OVOS2Q6IE36 1432 aa27.75■■■□□ 2.03
CHKB-201ENST00000406938 COG3Q96JB2 828 aa27.74■■■□□ 2.03
CHKB-201ENST00000406938 ROBO1Q9Y6N7 1651 aa27.73■■■□□ 2.03
CHKB-201ENST00000406938 PPP2R1AP30153 589 aa27.73■■■□□ 2.03
CHKB-201ENST00000406938 TNNT2P45379 298 aaPredicted RBP27.73■■■□□ 2.03
CHKB-201ENST00000406938 NLRP13Q86W25 1043 aa27.71■■■□□ 2.03
CHKB-201ENST00000406938 CERKQ8TCT0 537 aa27.71■■■□□ 2.03
CHKB-201ENST00000406938 USP31Q70CQ4 1352 aa27.71■■■□□ 2.03
CHKB-201ENST00000406938 NHSL1Q5SYE7 1610 aa27.71■■■□□ 2.03
CHKB-201ENST00000406938 ABTB2Q8N961 1025 aa27.7■■■□□ 2.03
CHKB-201ENST00000406938 USP54Q70EL1 1684 aa27.7■■■□□ 2.02
CHKB-201ENST00000406938 TOM1O60784 492 aa27.7■■■□□ 2.02
CHKB-201ENST00000406938 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
CHKB-201ENST00000406938 CCDC184Q52MB2 194 aa27.69■■■□□ 2.02
CHKB-201ENST00000406938 ALS2Q96Q42 1657 aa27.68■■■□□ 2.02
CHKB-201ENST00000406938 MARF1Q9Y4F3 1742 aaKnown RBP27.67■■■□□ 2.02
CHKB-201ENST00000406938 NUTM2GQ5VZR2 741 aa27.67■■■□□ 2.02
CHKB-201ENST00000406938 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
CHKB-201ENST00000406938 TNS3Q68CZ2 1445 aa27.67■■■□□ 2.02
CHKB-201ENST00000406938 NLRP6P59044 892 aa27.67■■■□□ 2.02
CHKB-201ENST00000406938 MRS2Q9HD23 443 aa27.66■■■□□ 2.02
CHKB-201ENST00000406938 SOS2Q07890 1332 aaPredicted RBP27.66■■■□□ 2.02
CHKB-201ENST00000406938 UBAP1LF5GYI3 381 aa27.65■■■□□ 2.02
CHKB-201ENST00000406938 AHDC1Q5TGY3 1603 aaPredicted RBP27.64■■■□□ 2.01
CHKB-201ENST00000406938 LMOD2Q6P5Q4 547 aa27.63■■■□□ 2.01
CHKB-201ENST00000406938 SPATA31A3Q5VYP0 1347 aa27.62■■■□□ 2.01
CHKB-201ENST00000406938 AATKQ6ZMQ8 1374 aa27.62■■■□□ 2.01
CHKB-201ENST00000406938 PIP4K2BP78356 416 aa27.61■■■□□ 2.01
CHKB-201ENST00000406938 FBLN1P23142 703 aa27.6■■■□□ 2.01
CHKB-201ENST00000406938 ARHGEF10O15013 1369 aa27.58■■■□□ 2.01
CHKB-201ENST00000406938 SOX12O15370 315 aa27.58■■■□□ 2.01
CHKB-201ENST00000406938 MTHFSP49914 203 aa27.58■■■□□ 2.01
CHKB-201ENST00000406938 SMG6Q86US8 1419 aaKnown RBP27.57■■■□□ 2
CHKB-201ENST00000406938 USP19O94966 1318 aa27.57■■■□□ 2
CHKB-201ENST00000406938 SLIT3O75094 1523 aa27.56■■■□□ 2
CHKB-201ENST00000406938 POLKQ9UBT6 870 aa27.56■■■□□ 2
CHKB-201ENST00000406938 RRS1Q15050 365 aaKnown RBP27.55■■■□□ 2
CHKB-201ENST00000406938 MED1Q15648 1581 aaPredicted RBP27.55■■■□□ 2
CHKB-201ENST00000406938 NFAT5O94916 1531 aa27.55■■■□□ 2
CHKB-201ENST00000406938 EMILIN1Q9Y6C2 1016 aa27.54■■■□□ 2
CHKB-201ENST00000406938 MAP2P11137 1827 aaKnown RBP27.53■■■□□ 2
CHKB-201ENST00000406938 PHLPP1O60346 1717 aa27.52■■■□□ 2
CHKB-201ENST00000406938 PLEKHG5O94827 1062 aa27.52■■■□□ 2
CHKB-201ENST00000406938 CDK12Q9NYV4 1490 aaPredicted RBP27.51■■□□□ 1.99
CHKB-201ENST00000406938 COL16A1Q07092 1604 aaPredicted RBP27.51■■□□□ 1.99
CHKB-201ENST00000406938 PHRF1Q9P1Y6 1649 aaKnown RBP27.51■■□□□ 1.99
CHKB-201ENST00000406938 PPM1GO15355 546 aaPredicted RBP27.5■■□□□ 1.99
CHKB-201ENST00000406938 KCNH5Q8NCM2 988 aa27.5■■□□□ 1.99
CHKB-201ENST00000406938 CRYBG1Q9Y4K1 1723 aa27.5■■□□□ 1.99
CHKB-201ENST00000406938 CFAP53Q96M91 514 aa27.49■■□□□ 1.99
CHKB-201ENST00000406938 MAP3K19Q56UN5 1328 aa27.49■■□□□ 1.99
CHKB-201ENST00000406938 COL3A1P02461 1466 aaPredicted RBP27.49■■□□□ 1.99
CHKB-201ENST00000406938 GCP02774 474 aa27.49■■□□□ 1.99
CHKB-201ENST00000406938 PNISRQ8TF01 805 aaKnown RBP27.49■■□□□ 1.99
CHKB-201ENST00000406938 PEAK1Q9H792 1746 aa27.48■■□□□ 1.99
CHKB-201ENST00000406938 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
CHKB-201ENST00000406938 LRRC59Q96AG4 307 aaKnown RBP27.47■■□□□ 1.99
CHKB-201ENST00000406938 FAM9BQ8IZU0 186 aa27.46■■□□□ 1.99
CHKB-201ENST00000406938 CABLES1Q8TDN4 633 aa27.45■■□□□ 1.99
CHKB-201ENST00000406938 INSRP06213 1382 aa27.45■■□□□ 1.98
CHKB-201ENST00000406938 SHPRHQ149N8 1683 aa27.44■■□□□ 1.98
CHKB-201ENST00000406938 LTN1O94822 1766 aa27.44■■□□□ 1.98
CHKB-201ENST00000406938 ABCA3Q99758 1704 aa27.43■■□□□ 1.98
CHKB-201ENST00000406938 FLT4P35916 1363 aa27.43■■□□□ 1.98
CHKB-201ENST00000406938 RTL1A6NKG5 1358 aa27.41■■□□□ 1.98
CHKB-201ENST00000406938 KIF24Q5T7B8 1368 aa27.41■■□□□ 1.98
CHKB-201ENST00000406938 COL22A1Q8NFW1 1626 aaPredicted RBP27.41■■□□□ 1.98
CHKB-201ENST00000406938 AMPHP49418 695 aa27.41■■□□□ 1.98
CHKB-201ENST00000406938 WDR43Q15061 677 aaKnown RBP eCLIP27.4■■□□□ 1.98
CHKB-201ENST00000406938 ARHGEF25Q86VW2 580 aa27.39■■□□□ 1.98
CHKB-201ENST00000406938 DIAPH1O60610 1272 aaKnown RBP27.38■■□□□ 1.97
CHKB-201ENST00000406938 HOXC9P31274 260 aa27.38■■□□□ 1.97
CHKB-201ENST00000406938 HSP90AB2PQ58FF8 381 aa27.38■■□□□ 1.97
CHKB-201ENST00000406938 ZBTB7CA1YPR0 619 aa27.37■■□□□ 1.97
CHKB-201ENST00000406938 ZC3H6P61129 1189 aaKnown RBP27.37■■□□□ 1.97
CHKB-201ENST00000406938 HAP1P54257 671 aaPredicted RBP27.35■■□□□ 1.97
CHKB-201ENST00000406938 YTHDC1Q96MU7 727 aaKnown RBP27.35■■□□□ 1.97
CHKB-201ENST00000406938 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
CHKB-201ENST00000406938 CPDO75976 1380 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms