RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
PRAME-206ENST00000406503 EIF3AQ14152 1382 aaKnown RBP18.97■□□□□ 0.63
PRAME-206ENST00000406503 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
PRAME-206ENST00000406503 ZRANB1Q9UGI0 708 aa18.97■□□□□ 0.63
PRAME-206ENST00000406503 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
PRAME-206ENST00000406503 LRP5O75197 1615 aa18.93■□□□□ 0.62
PRAME-206ENST00000406503 HRCP23327 699 aa18.93■□□□□ 0.62
PRAME-206ENST00000406503 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
PRAME-206ENST00000406503 CCDC9Q9Y3X0 531 aaKnown RBP18.93■□□□□ 0.62
PRAME-206ENST00000406503 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
PRAME-206ENST00000406503 KRT27Q7Z3Y8 459 aa18.92■□□□□ 0.62
PRAME-206ENST00000406503 STAC3Q96MF2 364 aa18.92■□□□□ 0.62
PRAME-206ENST00000406503 LMO7Q8WWI1 1683 aa18.91■□□□□ 0.62
PRAME-206ENST00000406503 QRICH2Q9H0J4 1663 aa18.9■□□□□ 0.62
PRAME-206ENST00000406503 FAM98CQ17RN3 349 aaKnown RBP18.9■□□□□ 0.62
PRAME-206ENST00000406503 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
PRAME-206ENST00000406503 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
PRAME-206ENST00000406503 SPATA31A5Q5VU36 1347 aa18.89■□□□□ 0.61
PRAME-206ENST00000406503 SPATA31A7Q8IWB4 1347 aa18.89■□□□□ 0.61
PRAME-206ENST00000406503 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
PRAME-206ENST00000406503 KIAA0232Q92628 1395 aa18.87■□□□□ 0.61
PRAME-206ENST00000406503 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
PRAME-206ENST00000406503 FAM182BQ5T319 152 aa18.85■□□□□ 0.61
PRAME-206ENST00000406503 CDK19Q9BWU1 502 aa18.85■□□□□ 0.61
PRAME-206ENST00000406503 RREB1Q92766 1687 aa18.84■□□□□ 0.61
PRAME-206ENST00000406503 CAMTA1Q9Y6Y1 1673 aa18.84■□□□□ 0.61
PRAME-206ENST00000406503 ACEP12821 1306 aa18.83■□□□□ 0.61
PRAME-206ENST00000406503 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
PRAME-206ENST00000406503 NBPF1Q3BBV0 1214 aa18.83■□□□□ 0.6
PRAME-206ENST00000406503 PRDM11Q9NQV5 511 aa18.83■□□□□ 0.6
PRAME-206ENST00000406503 DISP2A7MBM2 1401 aa18.83■□□□□ 0.6
PRAME-206ENST00000406503 SPATA31A1Q5TZJ5 1347 aa18.82■□□□□ 0.6
PRAME-206ENST00000406503 A0A0G2JS52 829 aa18.82■□□□□ 0.6
PRAME-206ENST00000406503 MYT1Q01538 1121 aa18.82■□□□□ 0.6
PRAME-206ENST00000406503 CHRNA2Q15822 529 aa18.82■□□□□ 0.6
PRAME-206ENST00000406503 PARP4Q9UKK3 1724 aaKnown RBP18.82■□□□□ 0.6
PRAME-206ENST00000406503 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
PRAME-206ENST00000406503 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
PRAME-206ENST00000406503 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
PRAME-206ENST00000406503 NUP188Q5SRE5 1749 aa18.8■□□□□ 0.6
PRAME-206ENST00000406503 SBF2Q86WG5 1849 aa18.8■□□□□ 0.6
PRAME-206ENST00000406503 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
PRAME-206ENST00000406503 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
PRAME-206ENST00000406503 PIK3C2AO00443 1686 aa18.79■□□□□ 0.6
PRAME-206ENST00000406503 COL18A1P39060 1754 aa18.79■□□□□ 0.6
PRAME-206ENST00000406503 AKAP12Q02952 1782 aa18.79■□□□□ 0.6
PRAME-206ENST00000406503 RGPD5Q99666 1765 aa18.79■□□□□ 0.6
PRAME-206ENST00000406503 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
PRAME-206ENST00000406503 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
PRAME-206ENST00000406503 USP19O94966 1318 aa18.78■□□□□ 0.6
PRAME-206ENST00000406503 BAG6P46379 1132 aa18.78■□□□□ 0.6
PRAME-206ENST00000406503 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
PRAME-206ENST00000406503 EN1Q05925 392 aaPredicted RBP18.78■□□□□ 0.6
PRAME-206ENST00000406503 PPIP5K1Q6PFW1 1433 aa18.77■□□□□ 0.6
PRAME-206ENST00000406503 PSDA5PKW4 1024 aaPredicted RBP18.77■□□□□ 0.6
PRAME-206ENST00000406503 PEAK1Q9H792 1746 aa18.76■□□□□ 0.59
PRAME-206ENST00000406503 CPDO75976 1380 aa18.76■□□□□ 0.59
PRAME-206ENST00000406503 STRN4Q9NRL3 753 aa18.75■□□□□ 0.59
PRAME-206ENST00000406503 SLIT3O75094 1523 aa18.74■□□□□ 0.59
PRAME-206ENST00000406503 LRRC37A3O60309 1634 aa18.74■□□□□ 0.59
PRAME-206ENST00000406503 COL5A2P05997 1499 aaPredicted RBP18.73■□□□□ 0.59
PRAME-206ENST00000406503 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
PRAME-206ENST00000406503 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
PRAME-206ENST00000406503 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
PRAME-206ENST00000406503 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
PRAME-206ENST00000406503 LARP1Q6PKG0 1096 aaKnown RBP18.71■□□□□ 0.59
PRAME-206ENST00000406503 BARGINQ6ZT62 677 aa18.71■□□□□ 0.59
PRAME-206ENST00000406503 USP6P35125 1406 aa18.71■□□□□ 0.59
PRAME-206ENST00000406503 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
PRAME-206ENST00000406503 RGPD3A6NKT7 1758 aaPredicted RBP18.7■□□□□ 0.58
PRAME-206ENST00000406503 RGPD4Q7Z3J3 1758 aa18.7■□□□□ 0.58
PRAME-206ENST00000406503 MON2Q7Z3U7 1717 aa18.69■□□□□ 0.58
PRAME-206ENST00000406503 TRIM37O94972 964 aa18.69■□□□□ 0.58
PRAME-206ENST00000406503 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
PRAME-206ENST00000406503 CAMKK2Q96RR4 588 aa18.69■□□□□ 0.58
PRAME-206ENST00000406503 GCP02774 474 aa18.68■□□□□ 0.58
PRAME-206ENST00000406503 FAM196AQ6ZSG2 479 aa18.68■□□□□ 0.58
PRAME-206ENST00000406503 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
PRAME-206ENST00000406503 R3HDM1Q15032 1099 aaKnown RBP18.67■□□□□ 0.58
PRAME-206ENST00000406503 L3MBTL2Q969R5 705 aa18.66■□□□□ 0.58
PRAME-206ENST00000406503 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
PRAME-206ENST00000406503 EVA1CP58658 441 aa18.65■□□□□ 0.58
PRAME-206ENST00000406503 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
PRAME-206ENST00000406503 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
PRAME-206ENST00000406503 CABP1Q9NZU7 370 aa18.65■□□□□ 0.58
PRAME-206ENST00000406503 CRB1P82279 1406 aa18.65■□□□□ 0.58
PRAME-206ENST00000406503 SIN3AQ96ST3 1273 aa18.63■□□□□ 0.57
PRAME-206ENST00000406503 PARD3Q8TEW0 1356 aa18.63■□□□□ 0.57
PRAME-206ENST00000406503 APBA3O96018 575 aa18.62■□□□□ 0.57
PRAME-206ENST00000406503 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
PRAME-206ENST00000406503 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
PRAME-206ENST00000406503 NFAT5O94916 1531 aa18.62■□□□□ 0.57
PRAME-206ENST00000406503 LTN1O94822 1766 aa18.62■□□□□ 0.57
PRAME-206ENST00000406503 PDE3BQ13370 1112 aa18.61■□□□□ 0.57
PRAME-206ENST00000406503 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
PRAME-206ENST00000406503 CPSF1Q10570 1443 aaKnown RBP18.59■□□□□ 0.57
PRAME-206ENST00000406503 NLRP6P59044 892 aa18.59■□□□□ 0.57
PRAME-206ENST00000406503 AXIN2Q9Y2T1 843 aa18.59■□□□□ 0.57
PRAME-206ENST00000406503 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
PRAME-206ENST00000406503 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms