RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SLC24A1O60721 1099 aa22.3■■□□□ 1.16
GDPD3-202ENST00000406256 SLC12A5Q9H2X9 1139 aa22.29■■□□□ 1.16
GDPD3-202ENST00000406256 BRD4O60885 1362 aaPredicted RBP22.29■■□□□ 1.16
GDPD3-202ENST00000406256 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
GDPD3-202ENST00000406256 A0A1W2PP64 1363 aa22.28■■□□□ 1.16
GDPD3-202ENST00000406256 USP54Q70EL1 1684 aa22.28■■□□□ 1.16
GDPD3-202ENST00000406256 NUTM2BA6NNL0 878 aaPredicted RBP22.27■■□□□ 1.16
GDPD3-202ENST00000406256 NUTM2EB1AL46 878 aaPredicted RBP22.27■■□□□ 1.16
GDPD3-202ENST00000406256 NUTM2AQ8IVF1 878 aaPredicted RBP22.27■■□□□ 1.16
GDPD3-202ENST00000406256 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
GDPD3-202ENST00000406256 CABLES1Q8TDN4 633 aa22.25■■□□□ 1.15
GDPD3-202ENST00000406256 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
GDPD3-202ENST00000406256 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
GDPD3-202ENST00000406256 KTN1Q86UP2 1357 aaKnown RBP22.24■■□□□ 1.15
GDPD3-202ENST00000406256 LMOD2Q6P5Q4 547 aa22.23■■□□□ 1.15
GDPD3-202ENST00000406256 TTC21BQ7Z4L5 1316 aa22.23■■□□□ 1.15
GDPD3-202ENST00000406256 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
GDPD3-202ENST00000406256 ZNF692Q9BU19 519 aaPredicted RBP22.23■■□□□ 1.15
GDPD3-202ENST00000406256 SLIT3O75094 1523 aa22.22■■□□□ 1.15
GDPD3-202ENST00000406256 USP19O94966 1318 aa22.22■■□□□ 1.15
GDPD3-202ENST00000406256 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
GDPD3-202ENST00000406256 EDC4Q6P2E9 1401 aaKnown RBP22.2■■□□□ 1.14
GDPD3-202ENST00000406256 ANKRD36BQ8N2N9 1353 aa22.2■■□□□ 1.14
GDPD3-202ENST00000406256 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
GDPD3-202ENST00000406256 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
GDPD3-202ENST00000406256 NUTM2GQ5VZR2 741 aa22.19■■□□□ 1.14
GDPD3-202ENST00000406256 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
GDPD3-202ENST00000406256 ABTB2Q8N961 1025 aa22.18■■□□□ 1.14
GDPD3-202ENST00000406256 TTC21AQ8NDW8 1320 aa22.17■■□□□ 1.14
GDPD3-202ENST00000406256 SLIT2O94813 1529 aa22.17■■□□□ 1.14
GDPD3-202ENST00000406256 NRAPQ86VF7 1730 aa22.17■■□□□ 1.14
GDPD3-202ENST00000406256 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
GDPD3-202ENST00000406256 MEX3CQ5U5Q3 659 aaKnown RBP22.16■■□□□ 1.14
GDPD3-202ENST00000406256 C8orf37Q96NL8 207 aa22.16■■□□□ 1.14
GDPD3-202ENST00000406256 TERF2IPQ9NYB0 399 aa22.16■■□□□ 1.14
GDPD3-202ENST00000406256 KIF20BQ96Q89 1820 aa22.16■■□□□ 1.14
GDPD3-202ENST00000406256 AFF2P51816 1311 aa22.16■■□□□ 1.14
GDPD3-202ENST00000406256 COL14A1Q05707 1796 aaKnown RBP22.15■■□□□ 1.14
GDPD3-202ENST00000406256 PLEKHG5O94827 1062 aa22.15■■□□□ 1.14
GDPD3-202ENST00000406256 HDGFL2Q7Z4V5 671 aaPredicted RBP22.15■■□□□ 1.14
GDPD3-202ENST00000406256 USP31Q70CQ4 1352 aa22.15■■□□□ 1.14
GDPD3-202ENST00000406256 POTEAQ6S8J7 498 aa22.14■■□□□ 1.14
GDPD3-202ENST00000406256 BCL9LQ86UU0 1499 aa22.14■■□□□ 1.13
GDPD3-202ENST00000406256 OVOS2A0A0J9YW53 1432 aa22.14■■□□□ 1.13
GDPD3-202ENST00000406256 OVOS2Q6IE36 1432 aa22.14■■□□□ 1.13
GDPD3-202ENST00000406256 LMO7Q8WWI1 1683 aa22.14■■□□□ 1.13
GDPD3-202ENST00000406256 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
GDPD3-202ENST00000406256 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
GDPD3-202ENST00000406256 ZRANB1Q9UGI0 708 aa22.13■■□□□ 1.13
GDPD3-202ENST00000406256 NFAT5O94916 1531 aa22.13■■□□□ 1.13
GDPD3-202ENST00000406256 KIF7Q2M1P5 1343 aa22.13■■□□□ 1.13
GDPD3-202ENST00000406256 COL18A1P39060 1754 aa22.13■■□□□ 1.13
GDPD3-202ENST00000406256 NME9Q86XW9 330 aa22.12■■□□□ 1.13
GDPD3-202ENST00000406256 ILDR2Q71H61 639 aa22.12■■□□□ 1.13
GDPD3-202ENST00000406256 NLRP13Q86W25 1043 aa22.12■■□□□ 1.13
GDPD3-202ENST00000406256 CARD14Q9BXL6 1004 aa22.12■■□□□ 1.13
GDPD3-202ENST00000406256 NLRP6P59044 892 aa22.11■■□□□ 1.13
GDPD3-202ENST00000406256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
GDPD3-202ENST00000406256 FAM83GA6ND36 823 aa22.1■■□□□ 1.13
GDPD3-202ENST00000406256 NGLY1Q96IV0 654 aa22.1■■□□□ 1.13
GDPD3-202ENST00000406256 CPDO75976 1380 aa22.09■■□□□ 1.13
GDPD3-202ENST00000406256 KIAA0232Q92628 1395 aa22.09■■□□□ 1.13
GDPD3-202ENST00000406256 GCP02774 474 aa22.08■■□□□ 1.12
GDPD3-202ENST00000406256 LTN1O94822 1766 aa22.07■■□□□ 1.12
GDPD3-202ENST00000406256 ATRNO75882 1429 aa22.07■■□□□ 1.12
GDPD3-202ENST00000406256 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
GDPD3-202ENST00000406256 NSD3Q9BZ95 1437 aa22.07■■□□□ 1.12
GDPD3-202ENST00000406256 RGPD5Q99666 1765 aa22.07■■□□□ 1.12
GDPD3-202ENST00000406256 WASHC2AQ641Q2 1341 aa22.07■■□□□ 1.12
GDPD3-202ENST00000406256 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
GDPD3-202ENST00000406256 POLR3GLQ9BT43 218 aa22.06■■□□□ 1.12
GDPD3-202ENST00000406256 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
GDPD3-202ENST00000406256 ZNF772Q68DY9 489 aaPredicted RBP22.05■■□□□ 1.12
GDPD3-202ENST00000406256 CAMTA1Q9Y6Y1 1673 aa22.05■■□□□ 1.12
GDPD3-202ENST00000406256 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
GDPD3-202ENST00000406256 USP21Q9UK80 565 aa22.04■■□□□ 1.12
GDPD3-202ENST00000406256 GLI3P10071 1580 aa22.04■■□□□ 1.12
GDPD3-202ENST00000406256 FYB1O15117 783 aa22.03■■□□□ 1.12
GDPD3-202ENST00000406256 SOCS7O14512 581 aa22.01■■□□□ 1.11
GDPD3-202ENST00000406256 CHRNA2Q15822 529 aa22.01■■□□□ 1.11
GDPD3-202ENST00000406256 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
GDPD3-202ENST00000406256 UNC5CLQ8IV45 518 aa22■■□□□ 1.11
GDPD3-202ENST00000406256 PANK3Q9H999 370 aa22■■□□□ 1.11
GDPD3-202ENST00000406256 ARHGEF25Q86VW2 580 aa21.99■■□□□ 1.11
GDPD3-202ENST00000406256 BTG4Q9NY30 223 aa21.99■■□□□ 1.11
GDPD3-202ENST00000406256 ABCC6O95255 1503 aa21.99■■□□□ 1.11
GDPD3-202ENST00000406256 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
GDPD3-202ENST00000406256 QTRT2Q9H974 415 aaKnown RBP21.99■■□□□ 1.11
GDPD3-202ENST00000406256 AATKQ6ZMQ8 1374 aa21.98■■□□□ 1.11
GDPD3-202ENST00000406256 KCNH5Q8NCM2 988 aa21.98■■□□□ 1.11
GDPD3-202ENST00000406256 GGNBP2Q9H3C7 697 aa21.98■■□□□ 1.11
GDPD3-202ENST00000406256 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
GDPD3-202ENST00000406256 TRPC5Q9UL62 973 aaPredicted RBP21.97■■□□□ 1.11
GDPD3-202ENST00000406256 SOX12O15370 315 aa21.96■■□□□ 1.11
GDPD3-202ENST00000406256 CDK12Q9NYV4 1490 aaPredicted RBP21.95■■□□□ 1.11
GDPD3-202ENST00000406256 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
GDPD3-202ENST00000406256 RGS12O14924 1447 aa21.94■■□□□ 1.1
GDPD3-202ENST00000406256 FBLN1P23142 703 aa21.94■■□□□ 1.1
GDPD3-202ENST00000406256 VPS72Q15906 364 aa21.94■■□□□ 1.1
GDPD3-202ENST00000406256 COG3Q96JB2 828 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms