RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 IGHDP01880 384 aa20.97■□□□□ 0.95
CDKN1A-203ENST00000405375 TMPOP42166 694 aaKnown RBP20.97■□□□□ 0.95
CDKN1A-203ENST00000405375 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
CDKN1A-203ENST00000405375 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.96■□□□□ 0.95
CDKN1A-203ENST00000405375 METP08581 1390 aa20.96■□□□□ 0.95
CDKN1A-203ENST00000405375 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.95
CDKN1A-203ENST00000405375 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
CDKN1A-203ENST00000405375 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
CDKN1A-203ENST00000405375 AAMPQ13685 434 aa20.94■□□□□ 0.94
CDKN1A-203ENST00000405375 FAM161AQ3B820 660 aa20.94■□□□□ 0.94
CDKN1A-203ENST00000405375 C8orf34Q49A92 452 aa20.94■□□□□ 0.94
CDKN1A-203ENST00000405375 CT47B1P0C2W7 299 aaPredicted RBP20.94■□□□□ 0.94
CDKN1A-203ENST00000405375 RLBP1P12271 317 aa20.94■□□□□ 0.94
CDKN1A-203ENST00000405375 CPSF1Q10570 1443 aaKnown RBP20.94■□□□□ 0.94
CDKN1A-203ENST00000405375 MAPK8IP3Q9UPT6 1336 aa20.93■□□□□ 0.94
CDKN1A-203ENST00000405375 BCL2L13Q9BXK5 485 aa20.93■□□□□ 0.94
CDKN1A-203ENST00000405375 TECPR2O15040 1411 aa20.92■□□□□ 0.94
CDKN1A-203ENST00000405375 WASLO00401 505 aaPredicted RBP20.92■□□□□ 0.94
CDKN1A-203ENST00000405375 TNNQ9UQP3 1299 aa20.92■□□□□ 0.94
CDKN1A-203ENST00000405375 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
CDKN1A-203ENST00000405375 IL16Q14005 1332 aa20.91■□□□□ 0.94
CDKN1A-203ENST00000405375 RGS3P49796 1198 aa20.91■□□□□ 0.94
CDKN1A-203ENST00000405375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.91■□□□□ 0.94
CDKN1A-203ENST00000405375 FAM135BQ49AJ0 1406 aa20.91■□□□□ 0.94
CDKN1A-203ENST00000405375 TSR2Q969E8 191 aaKnown RBP20.9■□□□□ 0.94
CDKN1A-203ENST00000405375 ESF1Q9H501 851 aaKnown RBP20.9■□□□□ 0.94
CDKN1A-203ENST00000405375 POLKQ9UBT6 870 aa20.9■□□□□ 0.94
CDKN1A-203ENST00000405375 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
CDKN1A-203ENST00000405375 EDC4Q6P2E9 1401 aaKnown RBP20.9■□□□□ 0.94
CDKN1A-203ENST00000405375 PPIP5K1Q6PFW1 1433 aa20.89■□□□□ 0.93
CDKN1A-203ENST00000405375 PNNQ9H307 717 aaKnown RBP20.89■□□□□ 0.93
CDKN1A-203ENST00000405375 TNRQ92752 1358 aa20.89■□□□□ 0.93
CDKN1A-203ENST00000405375 FCHSD2O94868 740 aa20.88■□□□□ 0.93
CDKN1A-203ENST00000405375 LRRC7Q96NW7 1537 aa20.88■□□□□ 0.93
CDKN1A-203ENST00000405375 TXNDC2Q86VQ3 553 aa20.88■□□□□ 0.93
CDKN1A-203ENST00000405375 CPS1P31327 1500 aa20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 RIPK4P57078 832 aa20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 FBLN1P23142 703 aa20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 EXOSC9Q06265 439 aaKnown RBP20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 PCDHB15Q9Y5E8 787 aa20.87■□□□□ 0.93
CDKN1A-203ENST00000405375 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
CDKN1A-203ENST00000405375 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
CDKN1A-203ENST00000405375 UBR1Q8IWV7 1749 aa20.85■□□□□ 0.93
CDKN1A-203ENST00000405375 NBR1Q14596 966 aa20.85■□□□□ 0.93
CDKN1A-203ENST00000405375 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
CDKN1A-203ENST00000405375 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
CDKN1A-203ENST00000405375 DDRGK1Q96HY6 314 aa20.85■□□□□ 0.93
CDKN1A-203ENST00000405375 MVPQ14764 893 aaKnown RBP20.84■□□□□ 0.93
CDKN1A-203ENST00000405375 NUDT16Q96DE0 195 aaKnown RBP20.84■□□□□ 0.93
CDKN1A-203ENST00000405375 MON2Q7Z3U7 1717 aa20.83■□□□□ 0.93
CDKN1A-203ENST00000405375 AATKQ6ZMQ8 1374 aa20.83■□□□□ 0.92
CDKN1A-203ENST00000405375 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.92
CDKN1A-203ENST00000405375 NME9Q86XW9 330 aa20.82■□□□□ 0.92
CDKN1A-203ENST00000405375 SSH1Q8WYL5 1049 aa20.82■□□□□ 0.92
CDKN1A-203ENST00000405375 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
CDKN1A-203ENST00000405375 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
CDKN1A-203ENST00000405375 NCKAP5LQ9HCH0 1330 aa20.8■□□□□ 0.92
CDKN1A-203ENST00000405375 AKAP12Q02952 1782 aa20.8■□□□□ 0.92
CDKN1A-203ENST00000405375 ROBO2Q9HCK4 1378 aa20.79■□□□□ 0.92
CDKN1A-203ENST00000405375 TRIM27P14373 513 aa20.79■□□□□ 0.92
CDKN1A-203ENST00000405375 C3P01024 1663 aa20.79■□□□□ 0.92
CDKN1A-203ENST00000405375 IL13P35225 146 aa20.79■□□□□ 0.92
CDKN1A-203ENST00000405375 FTSJ3Q8IY81 847 aaKnown RBP20.79■□□□□ 0.92
CDKN1A-203ENST00000405375 ZRANB1Q9UGI0 708 aa20.79■□□□□ 0.92
CDKN1A-203ENST00000405375 PRR36Q9H6K5 1346 aa20.78■□□□□ 0.92
CDKN1A-203ENST00000405375 PHACTR3Q96KR7 559 aa20.77■□□□□ 0.92
CDKN1A-203ENST00000405375 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
CDKN1A-203ENST00000405375 RWDD1Q9H446 243 aaPredicted RBP20.76■□□□□ 0.91
CDKN1A-203ENST00000405375 ITSN1Q15811 1721 aa20.76■□□□□ 0.91
CDKN1A-203ENST00000405375 NFE2L2Q16236 605 aa20.76■□□□□ 0.91
CDKN1A-203ENST00000405375 COG3Q96JB2 828 aa20.75■□□□□ 0.91
CDKN1A-203ENST00000405375 PLEKHG1Q9ULL1 1385 aa20.75■□□□□ 0.91
CDKN1A-203ENST00000405375 NEFMP07197 916 aa20.75■□□□□ 0.91
CDKN1A-203ENST00000405375 HMOX1P09601 288 aa20.75■□□□□ 0.91
CDKN1A-203ENST00000405375 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
CDKN1A-203ENST00000405375 NOB1Q9ULX3 412 aaKnown RBP20.74■□□□□ 0.91
CDKN1A-203ENST00000405375 PDZRN3Q9UPQ7 1066 aa20.74■□□□□ 0.91
CDKN1A-203ENST00000405375 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.73■□□□□ 0.91
CDKN1A-203ENST00000405375 LTKP29376 864 aa20.73■□□□□ 0.91
CDKN1A-203ENST00000405375 ALDH1L2Q3SY69 923 aa20.73■□□□□ 0.91
CDKN1A-203ENST00000405375 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
CDKN1A-203ENST00000405375 DDX19BQ9UMR2 479 aa20.73■□□□□ 0.91
CDKN1A-203ENST00000405375 KIF16BQ96L93 1317 aa20.72■□□□□ 0.91
CDKN1A-203ENST00000405375 USP19O94966 1318 aa20.72■□□□□ 0.91
CDKN1A-203ENST00000405375 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 LAS1LQ9Y4W2 734 aaKnown RBP20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 CEBPAP49715 358 aaPredicted RBP20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 BRPF1P55201 1214 aaPredicted RBP20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 RRS1Q15050 365 aaKnown RBP20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
CDKN1A-203ENST00000405375 IPO8O15397 1037 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms