RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 RPUSD2Q8IZ73 545 aaKnown RBP7.21□□□□□ -1.26
CNGA1-202ENST00000402813 CEP63Q96MT8 703 aa7.21□□□□□ -1.26
CNGA1-202ENST00000402813 COL4A3BPQ9Y5P4 624 aa7.21□□□□□ -1.26
CNGA1-202ENST00000402813 FAM200BP0CF97 657 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 PIK3R5Q8WYR1 880 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 TANGO6Q9C0B7 1094 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 PDZRN3Q9UPQ7 1066 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 TNIKQ9UKE5 1360 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 MS4A1P11836 297 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 ANKRD23Q86SG2 305 aa7.2□□□□□ -1.26
CNGA1-202ENST00000402813 RFX1P22670 979 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 MAN1A1P33908 653 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 BANK1Q8NDB2 785 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 SNRKQ9NRH2 765 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 SMARCA4P51532 1647 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 CCDC184Q52MB2 194 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 B4GALNT3Q6L9W6 998 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 C1orf131Q8NDD1 294 aaKnown RBP7.19□□□□□ -1.26
CNGA1-202ENST00000402813 ARMC5Q96C12 935 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
CNGA1-202ENST00000402813 MAP2K5Q13163 448 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 MTA1Q13330 715 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 ATL2Q8NHH9 583 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 ZNF512BQ96KM6 892 aaPredicted RBP7.18□□□□□ -1.26
CNGA1-202ENST00000402813 PAGR1Q9BTK6 254 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 TMX4Q9H1E5 349 aaPredicted RBP7.18□□□□□ -1.26
CNGA1-202ENST00000402813 PCDH12Q9NPG4 1184 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 GEMIN8Q9NWZ8 242 aaKnown RBP7.18□□□□□ -1.26
CNGA1-202ENST00000402813 NT5DC4Q86YG4 428 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 IRF6O14896 467 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 PRC1O43663 620 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
CNGA1-202ENST00000402813 EFCAB2Q5VUJ9 269 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 IL17RAQ96F46 866 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 SYNPO2Q9UMS6 1093 aa7.18□□□□□ -1.26
CNGA1-202ENST00000402813 BICDL2A1A5D9 508 aa7.17□□□□□ -1.26
CNGA1-202ENST00000402813 RGS20O76081 388 aa7.17□□□□□ -1.26
CNGA1-202ENST00000402813 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
CNGA1-202ENST00000402813 RASSF7Q02833 373 aa7.17□□□□□ -1.26
CNGA1-202ENST00000402813 SF3B2Q13435 895 aaKnown RBP7.17□□□□□ -1.26
CNGA1-202ENST00000402813 DHX38Q92620 1227 aaKnown RBP7.17□□□□□ -1.26
CNGA1-202ENST00000402813 LMOD3Q0VAK6 560 aa7.17□□□□□ -1.26
CNGA1-202ENST00000402813 TMC2Q8TDI7 906 aa7.17□□□□□ -1.26
CNGA1-202ENST00000402813 RSPH9Q9H1X1 276 aaPredicted RBP7.17□□□□□ -1.26
CNGA1-202ENST00000402813 GIGYF1O75420 1035 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-202ENST00000402813 RNF187Q5TA31 235 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-202ENST00000402813 FMNL3Q8IVF7 1028 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 G3BP2Q9UN86 482 aaKnown RBP7.16□□□□□ -1.26
CNGA1-202ENST00000402813 SCRIBQ14160 1630 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 FGAP02671 866 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 CD53P19397 219 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 HSD3B2P26439 372 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 HDLBPQ00341 1268 aaKnown RBP7.16□□□□□ -1.26
CNGA1-202ENST00000402813 UBE4AQ14139 1066 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 ZNF746Q6NUN9 644 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-202ENST00000402813 POTEHQ6S545 545 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 TINF2Q9BSI4 451 aa7.16□□□□□ -1.26
CNGA1-202ENST00000402813 DDX56Q9NY93 547 aaKnown RBP7.16□□□□□ -1.26
CNGA1-202ENST00000402813 TCERG1O14776 1098 aaKnown RBP7.15□□□□□ -1.26
CNGA1-202ENST00000402813 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.26
CNGA1-202ENST00000402813 COL6A1P12109 1028 aa7.15□□□□□ -1.26
CNGA1-202ENST00000402813 IRX3P78415 501 aaPredicted RBP7.15□□□□□ -1.26
CNGA1-202ENST00000402813 FBXO33Q7Z6M2 555 aa7.15□□□□□ -1.26
CNGA1-202ENST00000402813 PPARGC1BQ86YN6 1023 aaKnown RBP7.15□□□□□ -1.26
CNGA1-202ENST00000402813 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
CNGA1-202ENST00000402813 ENOX1Q8TC92 643 aaKnown RBP7.15□□□□□ -1.26
CNGA1-202ENST00000402813 DDX27Q96GQ7 796 aaKnown RBP7.15□□□□□ -1.26
CNGA1-202ENST00000402813 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
CNGA1-202ENST00000402813 ERICH3Q5RHP9 1530 aa7.15□□□□□ -1.26
CNGA1-202ENST00000402813 CBFA2T2O43439 604 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 S100BP04271 92 aaPredicted RBP7.15□□□□□ -1.27
CNGA1-202ENST00000402813 APPP05067 770 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 POU5F1BQ06416 359 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 RAD51AP2Q09MP3 1159 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.15□□□□□ -1.27
CNGA1-202ENST00000402813 SLC43A3Q8NBI5 491 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 SLC39A13Q96H72 371 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 MAP3K1Q13233 1512 aa7.15□□□□□ -1.27
CNGA1-202ENST00000402813 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 DHX8Q14562 1220 aaKnown RBP7.14□□□□□ -1.27
CNGA1-202ENST00000402813 JAZF1Q86VZ6 243 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 SFMBT1Q9UHJ3 866 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 BMS1Q14692 1282 aaKnown RBP7.14□□□□□ -1.27
CNGA1-202ENST00000402813 LSM14AQ8ND56 463 aaKnown RBP7.14□□□□□ -1.27
CNGA1-202ENST00000402813 CASS4Q9NQ75 786 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 ABCF2Q9UG63 623 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 PRKAG2Q9UGJ0 569 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 TBC1D2BQ9UPU7 963 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 HSP90AB3PQ58FF7 597 aa7.14□□□□□ -1.27
CNGA1-202ENST00000402813 NBPF10Q6P3W6 841 aaKnown RBP7.14□□□□□ -1.27
CNGA1-202ENST00000402813 MROH2BQ7Z745 1585 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 MAPRE1Q15691 268 aaKnown RBP7.13□□□□□ -1.27
CNGA1-202ENST00000402813 CCDC174Q6PII3 467 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
CNGA1-202ENST00000402813 PDILTQ8N807 584 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 C8orf48Q96LL4 319 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 NAP1L4Q99733 375 aaKnown RBP7.13□□□□□ -1.27
CNGA1-202ENST00000402813 IFT122Q9HBG6 1241 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms