RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.41■■■■□ 3.1
CGREF1-203ENST00000402394 PLEKHF1Q96S99 279 aa34.41■■■■□ 3.1
CGREF1-203ENST00000402394 FER1L4A9Z1Z3 1794 aa34.4■■■■□ 3.1
CGREF1-203ENST00000402394 SLIT1O75093 1534 aa34.39■■■■□ 3.1
CGREF1-203ENST00000402394 BCAR3O75815 825 aa34.39■■■■□ 3.1
CGREF1-203ENST00000402394 CCDC61Q9Y6R9 512 aa34.39■■■■□ 3.1
CGREF1-203ENST00000402394 ARHGAP23Q9P227 1491 aa34.39■■■■□ 3.1
CGREF1-203ENST00000402394 U2SURPO15042 1029 aaKnown RBP34.38■■■■□ 3.09
CGREF1-203ENST00000402394 MON2Q7Z3U7 1717 aa34.37■■■■□ 3.09
CGREF1-203ENST00000402394 DIAPH1O60610 1272 aaKnown RBP34.37■■■■□ 3.09
CGREF1-203ENST00000402394 AKAP12Q02952 1782 aa34.34■■■■□ 3.09
CGREF1-203ENST00000402394 EID1Q9Y6B2 187 aa34.34■■■■□ 3.09
CGREF1-203ENST00000402394 TCERG1O14776 1098 aaKnown RBP34.33■■■■□ 3.09
CGREF1-203ENST00000402394 POLKQ9UBT6 870 aa34.33■■■■□ 3.09
CGREF1-203ENST00000402394 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.32■■■■□ 3.08
CGREF1-203ENST00000402394 MYH16Q9H6N6 1097 aa34.31■■■■□ 3.08
CGREF1-203ENST00000402394 PRR36Q9H6K5 1346 aa34.31■■■■□ 3.08
CGREF1-203ENST00000402394 ITSN1Q15811 1721 aa34.3■■■■□ 3.08
CGREF1-203ENST00000402394 TMPOP42166 694 aaKnown RBP34.3■■■■□ 3.08
CGREF1-203ENST00000402394 KDM2BQ8NHM5 1336 aa34.3■■■■□ 3.08
CGREF1-203ENST00000402394 PNNQ9H307 717 aaKnown RBP34.29■■■■□ 3.08
CGREF1-203ENST00000402394 NCKAP5LQ9HCH0 1330 aa34.29■■■■□ 3.08
CGREF1-203ENST00000402394 MAPK8IP3Q9UPT6 1336 aa34.29■■■■□ 3.08
CGREF1-203ENST00000402394 PTPRUQ92729 1446 aa34.28■■■■□ 3.08
CGREF1-203ENST00000402394 PDE3AQ14432 1141 aa34.28■■■■□ 3.08
CGREF1-203ENST00000402394 AATKQ6ZMQ8 1374 aa34.28■■■■□ 3.08
CGREF1-203ENST00000402394 NME9Q86XW9 330 aa34.28■■■■□ 3.08
CGREF1-203ENST00000402394 ZNF692Q9BU19 519 aaPredicted RBP34.27■■■■□ 3.08
CGREF1-203ENST00000402394 MAP2P11137 1827 aaKnown RBP34.26■■■■□ 3.08
CGREF1-203ENST00000402394 RARSP54136 660 aaKnown RBP34.26■■■■□ 3.07
CGREF1-203ENST00000402394 TOPAZ1Q8N9V7 1692 aa34.25■■■■□ 3.07
CGREF1-203ENST00000402394 PLPPR3Q6T4P5 718 aa34.24■■■■□ 3.07
CGREF1-203ENST00000402394 FCHSD2O94868 740 aa34.24■■■■□ 3.07
CGREF1-203ENST00000402394 MS4A1P11836 297 aa34.24■■■■□ 3.07
CGREF1-203ENST00000402394 TRIM35Q9UPQ4 493 aa34.24■■■■□ 3.07
CGREF1-203ENST00000402394 CDK12Q9NYV4 1490 aaPredicted RBP34.23■■■■□ 3.07
CGREF1-203ENST00000402394 CENPQQ7L2Z9 268 aaPredicted RBP34.23■■■■□ 3.07
CGREF1-203ENST00000402394 SLC26A8Q96RN1 970 aa34.23■■■■□ 3.07
CGREF1-203ENST00000402394 TBX22Q9Y458 520 aa34.23■■■■□ 3.07
CGREF1-203ENST00000402394 FBLN1P23142 703 aa34.22■■■■□ 3.07
CGREF1-203ENST00000402394 LRRC7Q96NW7 1537 aa34.22■■■■□ 3.07
CGREF1-203ENST00000402394 THEMISQ8N1K5 641 aaPredicted RBP34.22■■■■□ 3.07
CGREF1-203ENST00000402394 DIP2AQ14689 1571 aa34.21■■■■□ 3.07
CGREF1-203ENST00000402394 MSH5O43196 834 aa34.21■■■■□ 3.07
CGREF1-203ENST00000402394 IL16Q14005 1332 aa34.2■■■■□ 3.07
CGREF1-203ENST00000402394 COG3Q96JB2 828 aa34.2■■■■□ 3.06
CGREF1-203ENST00000402394 ZRANB1Q9UGI0 708 aa34.2■■■■□ 3.06
CGREF1-203ENST00000402394 PTCH1Q13635 1447 aa34.19■■■■□ 3.06
CGREF1-203ENST00000402394 PPM1GO15355 546 aaPredicted RBP34.18■■■■□ 3.06
CGREF1-203ENST00000402394 NRKQ7Z2Y5 1582 aa34.18■■■■□ 3.06
CGREF1-203ENST00000402394 RSPH6AQ9H0K4 717 aa34.18■■■■□ 3.06
CGREF1-203ENST00000402394 EMILIN1Q9Y6C2 1016 aa34.18■■■■□ 3.06
CGREF1-203ENST00000402394 PLEKHG3A1L390 1219 aa34.17■■■■□ 3.06
CGREF1-203ENST00000402394 CT47B1P0C2W7 299 aaPredicted RBP34.17■■■■□ 3.06
CGREF1-203ENST00000402394 CANXP27824 592 aaKnown RBP34.16■■■■□ 3.06
CGREF1-203ENST00000402394 AMOTL2Q9Y2J4 779 aa34.16■■■■□ 3.06
CGREF1-203ENST00000402394 RIPK4P57078 832 aa34.15■■■■□ 3.06
CGREF1-203ENST00000402394 IL13P35225 146 aa34.13■■■■□ 3.05
CGREF1-203ENST00000402394 RIMS1Q86UR5 1692 aaKnown RBP34.11■■■■□ 3.05
CGREF1-203ENST00000402394 ACEP12821 1306 aa34.11■■■■□ 3.05
CGREF1-203ENST00000402394 PRKAR2BP31323 418 aa34.11■■■■□ 3.05
CGREF1-203ENST00000402394 MYT1Q01538 1121 aa34.1■■■■□ 3.05
CGREF1-203ENST00000402394 PANK1Q8TE04 598 aa34.1■■■■□ 3.05
CGREF1-203ENST00000402394 TTC21BQ7Z4L5 1316 aa34.1■■■■□ 3.05
CGREF1-203ENST00000402394 FRAT1Q92837 279 aaPredicted RBP34.1■■■■□ 3.05
CGREF1-203ENST00000402394 ANP32EQ9BTT0 268 aa34.1■■■■□ 3.05
CGREF1-203ENST00000402394 ADAMTSL3P82987 1691 aa34.09■■■■□ 3.05
CGREF1-203ENST00000402394 TSR2Q969E8 191 aaKnown RBP34.09■■■■□ 3.05
CGREF1-203ENST00000402394 USP6P35125 1406 aa34.09■■■■□ 3.05
CGREF1-203ENST00000402394 XRN1Q8IZH2 1706 aaKnown RBP34.08■■■■□ 3.05
CGREF1-203ENST00000402394 PDE4AP27815 886 aa34.07■■■■□ 3.04
CGREF1-203ENST00000402394 CEP170BQ9Y4F5 1589 aaPredicted RBP34.07■■■■□ 3.04
CGREF1-203ENST00000402394 NEFMP07197 916 aa34.06■■■■□ 3.04
CGREF1-203ENST00000402394 COG6Q9Y2V7 657 aa34.06■■■■□ 3.04
CGREF1-203ENST00000402394 OVOS2A0A0J9YW53 1432 aa34.06■■■■□ 3.04
CGREF1-203ENST00000402394 OVOS2Q6IE36 1432 aa34.06■■■■□ 3.04
CGREF1-203ENST00000402394 AAMPQ13685 434 aa34.05■■■■□ 3.04
CGREF1-203ENST00000402394 BACH2Q9BYV9 841 aa34.05■■■■□ 3.04
CGREF1-203ENST00000402394 EXOSC9Q06265 439 aaKnown RBP34.04■■■■□ 3.04
CGREF1-203ENST00000402394 RRS1Q15050 365 aaKnown RBP34.04■■■■□ 3.04
CGREF1-203ENST00000402394 CLUAP1Q96AJ1 413 aa34.04■■■■□ 3.04
CGREF1-203ENST00000402394 BCL2L13Q9BXK5 485 aa34.04■■■■□ 3.04
CGREF1-203ENST00000402394 SSH2Q76I76 1423 aa34.03■■■■□ 3.04
CGREF1-203ENST00000402394 SKAP1Q86WV1 359 aa34.03■■■■□ 3.04
CGREF1-203ENST00000402394 NFE2L2Q16236 605 aa34.02■■■■□ 3.04
CGREF1-203ENST00000402394 NUTM2FA1L443 756 aa34.02■■■■□ 3.04
CGREF1-203ENST00000402394 HMOX1P09601 288 aa34.02■■■■□ 3.04
CGREF1-203ENST00000402394 PHACTR3Q96KR7 559 aa34.01■■■■□ 3.04
CGREF1-203ENST00000402394 NALCNQ8IZF0 1738 aa34.01■■■■□ 3.03
CGREF1-203ENST00000402394 PIK3R4Q99570 1358 aa34■■■■□ 3.03
CGREF1-203ENST00000402394 RLBP1P12271 317 aa33.99■■■■□ 3.03
CGREF1-203ENST00000402394 ANP32AP39687 249 aaKnown RBP33.98■■■■□ 3.03
CGREF1-203ENST00000402394 USP31Q70CQ4 1352 aa33.97■■■■□ 3.03
CGREF1-203ENST00000402394 TNNQ9UQP3 1299 aa33.96■■■■□ 3.03
CGREF1-203ENST00000402394 ZKSCAN2Q63HK3 967 aa33.95■■■■□ 3.03
CGREF1-203ENST00000402394 TTC21AQ8NDW8 1320 aa33.94■■■■□ 3.02
CGREF1-203ENST00000402394 IGHDP01880 384 aa33.94■■■■□ 3.02
CGREF1-203ENST00000402394 SMC4Q9NTJ3 1288 aa33.93■■■■□ 3.02
CGREF1-203ENST00000402394 CALD1Q05682 793 aaKnown RBP33.92■■■■□ 3.02
CGREF1-203ENST00000402394 SSH1Q8WYL5 1049 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms