RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 KIF3AQ9Y496 699 aa21.55■■□□□ 1.04
SNED1-204ENST00000401884 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNED1-204ENST00000401884 NEK4P51957 841 aa21.54■■□□□ 1.04
SNED1-204ENST00000401884 CDK11BP21127 795 aaKnown RBP21.54■■□□□ 1.04
SNED1-204ENST00000401884 TTC5Q8N0Z6 440 aa21.54■■□□□ 1.04
SNED1-204ENST00000401884 SLC26A8Q96RN1 970 aa21.54■■□□□ 1.04
SNED1-204ENST00000401884 RABEP1Q15276 862 aa21.53■■□□□ 1.04
SNED1-204ENST00000401884 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
SNED1-204ENST00000401884 KIAA0556O60303 1618 aa21.52■■□□□ 1.04
SNED1-204ENST00000401884 FANCAO15360 1455 aa21.52■■□□□ 1.03
SNED1-204ENST00000401884 IGHDP01880 384 aa21.52■■□□□ 1.03
SNED1-204ENST00000401884 GNAI2P04899 355 aa21.52■■□□□ 1.03
SNED1-204ENST00000401884 H3BQV1 296 aa21.51■■□□□ 1.03
SNED1-204ENST00000401884 IFFO2Q5TF58 517 aa21.51■■□□□ 1.03
SNED1-204ENST00000401884 FAM184AQ8NB25 1140 aa21.51■■□□□ 1.03
SNED1-204ENST00000401884 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
SNED1-204ENST00000401884 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
SNED1-204ENST00000401884 PLCH2O75038 1416 aa21.5■■□□□ 1.03
SNED1-204ENST00000401884 ERC2O15083 957 aa21.5■■□□□ 1.03
SNED1-204ENST00000401884 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
SNED1-204ENST00000401884 TRIM27P14373 513 aa21.5■■□□□ 1.03
SNED1-204ENST00000401884 SMC3Q9UQE7 1217 aa21.5■■□□□ 1.03
SNED1-204ENST00000401884 AIMP1Q12904 312 aaKnown RBP21.49■■□□□ 1.03
SNED1-204ENST00000401884 SF3A1Q15459 793 aaKnown RBP21.49■■□□□ 1.03
SNED1-204ENST00000401884 MCM4P33991 863 aa21.49■■□□□ 1.03
SNED1-204ENST00000401884 FBXO31Q5XUX0 539 aaPredicted RBP21.49■■□□□ 1.03
SNED1-204ENST00000401884 ABCC11Q96J66 1382 aa21.49■■□□□ 1.03
SNED1-204ENST00000401884 CLASRPQ8N2M8 674 aaKnown RBP21.48■■□□□ 1.03
SNED1-204ENST00000401884 RAPGEF4Q8WZA2 1011 aa21.48■■□□□ 1.03
SNED1-204ENST00000401884 SYCP2Q9BX26 1530 aa21.48■■□□□ 1.03
SNED1-204ENST00000401884 GPRASP1Q5JY77 1395 aa21.48■■□□□ 1.03
SNED1-204ENST00000401884 HDGFL1Q5TGJ6 251 aa21.48■■□□□ 1.03
SNED1-204ENST00000401884 DCTN1Q14203 1278 aa21.48■■□□□ 1.03
SNED1-204ENST00000401884 NUP160Q12769 1436 aa21.48■■□□□ 1.03
SNED1-204ENST00000401884 VPS37CA5D8V6 355 aaPredicted RBP21.48■■□□□ 1.03
SNED1-204ENST00000401884 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
SNED1-204ENST00000401884 TEX14Q8IWB6 1497 aa21.47■■□□□ 1.03
SNED1-204ENST00000401884 CCT4P50991 539 aaKnown RBP21.47■■□□□ 1.03
SNED1-204ENST00000401884 EMILIN1Q9Y6C2 1016 aa21.47■■□□□ 1.03
SNED1-204ENST00000401884 K7ELQ4 463 aaPredicted RBP21.46■■□□□ 1.03
SNED1-204ENST00000401884 ALDH1L2Q3SY69 923 aa21.46■■□□□ 1.03
SNED1-204ENST00000401884 NME9Q86XW9 330 aa21.46■■□□□ 1.03
SNED1-204ENST00000401884 NASPP49321 788 aaPredicted RBP21.45■■□□□ 1.02
SNED1-204ENST00000401884 RIC3Q7Z5B4 369 aa21.45■■□□□ 1.02
SNED1-204ENST00000401884 RPAP2Q8IXW5 612 aaPredicted RBP21.45■■□□□ 1.02
SNED1-204ENST00000401884 DISP1Q96F81 1524 aa21.45■■□□□ 1.02
SNED1-204ENST00000401884 CAVIN1Q6NZI2 390 aaKnown RBP21.45■■□□□ 1.02
SNED1-204ENST00000401884 HSP90AA2PQ14568 343 aaPredicted RBP21.45■■□□□ 1.02
SNED1-204ENST00000401884 NLRP2Q9NX02 1062 aa21.45■■□□□ 1.02
SNED1-204ENST00000401884 DUOX2Q9NRD8 1548 aa21.44■■□□□ 1.02
SNED1-204ENST00000401884 ARHGEF12Q9NZN5 1544 aa21.44■■□□□ 1.02
SNED1-204ENST00000401884 KDM5BQ9UGL1 1544 aa21.44■■□□□ 1.02
SNED1-204ENST00000401884 TOMM22Q9NS69 142 aa21.43■■□□□ 1.02
SNED1-204ENST00000401884 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
SNED1-204ENST00000401884 TRAPPC8Q9Y2L5 1435 aa21.43■■□□□ 1.02
SNED1-204ENST00000401884 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
SNED1-204ENST00000401884 PLEKHH1Q9ULM0 1364 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 MCM2P49736 904 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 ASXL1Q8IXJ9 1541 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 PRPF40AO75400 957 aaKnown RBP21.42■■□□□ 1.02
SNED1-204ENST00000401884 CNTROBQ8N137 903 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 MCM10Q7L590 875 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 LRRCC1Q9C099 1032 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
SNED1-204ENST00000401884 UHRF1BP1Q6BDS2 1440 aa21.41■■□□□ 1.02
SNED1-204ENST00000401884 RNF214Q8ND24 703 aa21.41■■□□□ 1.02
SNED1-204ENST00000401884 TPM4P67936 248 aa21.41■■□□□ 1.02
SNED1-204ENST00000401884 THEMISQ8N1K5 641 aaPredicted RBP21.41■■□□□ 1.02
SNED1-204ENST00000401884 TBC1D2Q9BYX2 928 aa21.41■■□□□ 1.02
SNED1-204ENST00000401884 MIS18AQ9NYP9 233 aa21.41■■□□□ 1.02
SNED1-204ENST00000401884 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
SNED1-204ENST00000401884 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
SNED1-204ENST00000401884 CARD14Q9BXL6 1004 aa21.4■■□□□ 1.02
SNED1-204ENST00000401884 CIZ1Q9ULV3 898 aaPredicted RBP21.4■■□□□ 1.02
SNED1-204ENST00000401884 NSD2O96028 1365 aa21.4■■□□□ 1.02
SNED1-204ENST00000401884 MAGI3Q5TCQ9 1506 aa21.4■■□□□ 1.02
SNED1-204ENST00000401884 PLEKHO1Q53GL0 409 aaPredicted RBP21.39■■□□□ 1.02
SNED1-204ENST00000401884 BECN2A8MW95 431 aa21.39■■□□□ 1.01
SNED1-204ENST00000401884 SAMD9Q5K651 1589 aa21.39■■□□□ 1.01
SNED1-204ENST00000401884 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
SNED1-204ENST00000401884 SRCIN1Q9C0H9 1055 aa21.39■■□□□ 1.01
SNED1-204ENST00000401884 GOLGA6L19H0YKK7 550 aa21.38■■□□□ 1.01
SNED1-204ENST00000401884 FBLN1P23142 703 aa21.38■■□□□ 1.01
SNED1-204ENST00000401884 WASLO00401 505 aaPredicted RBP21.37■■□□□ 1.01
SNED1-204ENST00000401884 MBD3O95983 291 aa21.37■■□□□ 1.01
SNED1-204ENST00000401884 LRRFIP1Q32MZ4 808 aaKnown RBP21.37■■□□□ 1.01
SNED1-204ENST00000401884 FYB1O15117 783 aa21.37■■□□□ 1.01
SNED1-204ENST00000401884 BICD2Q8TD16 824 aa21.37■■□□□ 1.01
SNED1-204ENST00000401884 EXOC6BQ9Y2D4 811 aa21.37■■□□□ 1.01
SNED1-204ENST00000401884 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
SNED1-204ENST00000401884 EVA1CP58658 441 aa21.36■■□□□ 1.01
SNED1-204ENST00000401884 CCDC34Q96HJ3 373 aa21.36■■□□□ 1.01
SNED1-204ENST00000401884 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.36■■□□□ 1.01
SNED1-204ENST00000401884 ADGRL2O95490 1459 aa21.36■■□□□ 1.01
SNED1-204ENST00000401884 SPATA31E1Q6ZUB1 1445 aa21.36■■□□□ 1.01
SNED1-204ENST00000401884 NEUROD6Q96NK8 337 aa21.35■■□□□ 1.01
SNED1-204ENST00000401884 ZNF530Q6P9A1 599 aaPredicted RBP21.35■■□□□ 1.01
SNED1-204ENST00000401884 FSD1Q9BTV5 496 aa21.35■■□□□ 1.01
SNED1-204ENST00000401884 IL1RAPL2Q9NP60 686 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms