RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 KIF1AQ12756 1690 aa26.31■■□□□ 1.8
AC008060.1-201ENST00000401499 ATF3P18847 181 aa26.3■■□□□ 1.8
AC008060.1-201ENST00000401499 TTC21BQ7Z4L5 1316 aa26.3■■□□□ 1.8
AC008060.1-201ENST00000401499 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
AC008060.1-201ENST00000401499 ESCO1Q5FWF5 840 aa26.29■■□□□ 1.8
AC008060.1-201ENST00000401499 YTHDC1Q96MU7 727 aaKnown RBP26.29■■□□□ 1.8
AC008060.1-201ENST00000401499 ORAI2Q96SN7 254 aa26.29■■□□□ 1.8
AC008060.1-201ENST00000401499 NME9Q86XW9 330 aa26.29■■□□□ 1.8
AC008060.1-201ENST00000401499 CADPS2Q86UW7 1296 aa26.28■■□□□ 1.8
AC008060.1-201ENST00000401499 PIK3C2AO00443 1686 aa26.26■■□□□ 1.79
AC008060.1-201ENST00000401499 TNNT2P45379 298 aaPredicted RBP26.25■■□□□ 1.79
AC008060.1-201ENST00000401499 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
AC008060.1-201ENST00000401499 TTC21AQ8NDW8 1320 aa26.23■■□□□ 1.79
AC008060.1-201ENST00000401499 OVOS2A0A0J9YW53 1432 aa26.23■■□□□ 1.79
AC008060.1-201ENST00000401499 OVOS2Q6IE36 1432 aa26.23■■□□□ 1.79
AC008060.1-201ENST00000401499 AEBP2Q6ZN18 517 aaPredicted RBP26.22■■□□□ 1.79
AC008060.1-201ENST00000401499 PNISRQ8TF01 805 aaKnown RBP26.22■■□□□ 1.79
AC008060.1-201ENST00000401499 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
AC008060.1-201ENST00000401499 USP54Q70EL1 1684 aa26.21■■□□□ 1.79
AC008060.1-201ENST00000401499 FAM9BQ8IZU0 186 aa26.2■■□□□ 1.79
AC008060.1-201ENST00000401499 TRPM3Q9HCF6 1732 aaPredicted RBP26.2■■□□□ 1.78
AC008060.1-201ENST00000401499 MAP2P11137 1827 aaKnown RBP26.18■■□□□ 1.78
AC008060.1-201ENST00000401499 FOXO3O43524 673 aa26.17■■□□□ 1.78
AC008060.1-201ENST00000401499 COG3Q96JB2 828 aa26.17■■□□□ 1.78
AC008060.1-201ENST00000401499 SCAF1Q9H7N4 1312 aaKnown RBP26.17■■□□□ 1.78
AC008060.1-201ENST00000401499 USP31Q70CQ4 1352 aa26.16■■□□□ 1.78
AC008060.1-201ENST00000401499 SHPRHQ149N8 1683 aa26.15■■□□□ 1.78
AC008060.1-201ENST00000401499 PSME1Q06323 249 aa26.15■■□□□ 1.78
AC008060.1-201ENST00000401499 MTHFSP49914 203 aa26.14■■□□□ 1.78
AC008060.1-201ENST00000401499 FBLN1P23142 703 aa26.13■■□□□ 1.77
AC008060.1-201ENST00000401499 XPCQ01831 940 aaPredicted RBP26.12■■□□□ 1.77
AC008060.1-201ENST00000401499 AATKQ6ZMQ8 1374 aa26.12■■□□□ 1.77
AC008060.1-201ENST00000401499 SLAIN2Q9P270 581 aa26.12■■□□□ 1.77
AC008060.1-201ENST00000401499 SMG6Q86US8 1419 aaKnown RBP26.11■■□□□ 1.77
AC008060.1-201ENST00000401499 PAK3O75914 559 aaPredicted RBP26.11■■□□□ 1.77
AC008060.1-201ENST00000401499 BRINP3Q76B58 766 aa26.11■■□□□ 1.77
AC008060.1-201ENST00000401499 ALS2Q96Q42 1657 aa26.1■■□□□ 1.77
AC008060.1-201ENST00000401499 COL3A1P02461 1466 aaPredicted RBP26.1■■□□□ 1.77
AC008060.1-201ENST00000401499 KRT28Q7Z3Y7 464 aa26.09■■□□□ 1.77
AC008060.1-201ENST00000401499 DDX17Q92841 729 aaKnown RBP26.09■■□□□ 1.77
AC008060.1-201ENST00000401499 PXDNQ92626 1479 aa26.09■■□□□ 1.77
AC008060.1-201ENST00000401499 ABTB2Q8N961 1025 aa26.08■■□□□ 1.77
AC008060.1-201ENST00000401499 POLKQ9UBT6 870 aa26.08■■□□□ 1.77
AC008060.1-201ENST00000401499 NLRP6P59044 892 aa26.07■■□□□ 1.76
AC008060.1-201ENST00000401499 NUTM2GQ5VZR2 741 aa26.07■■□□□ 1.76
AC008060.1-201ENST00000401499 NPHP3Q7Z494 1330 aa26.06■■□□□ 1.76
AC008060.1-201ENST00000401499 EMILIN1Q9Y6C2 1016 aa26.05■■□□□ 1.76
AC008060.1-201ENST00000401499 NHSL1Q5SYE7 1610 aa26.05■■□□□ 1.76
AC008060.1-201ENST00000401499 PNPLA6Q8IY17 1366 aa26.05■■□□□ 1.76
AC008060.1-201ENST00000401499 PEAK1Q9H792 1746 aa26.05■■□□□ 1.76
AC008060.1-201ENST00000401499 CDK12Q9NYV4 1490 aaPredicted RBP26.04■■□□□ 1.76
AC008060.1-201ENST00000401499 RRS1Q15050 365 aaKnown RBP26.03■■□□□ 1.76
AC008060.1-201ENST00000401499 CFAP53Q96M91 514 aa26.03■■□□□ 1.76
AC008060.1-201ENST00000401499 BLMP54132 1417 aaPredicted RBP26.02■■□□□ 1.76
AC008060.1-201ENST00000401499 SBNO1A3KN83 1393 aa26.02■■□□□ 1.76
AC008060.1-201ENST00000401499 INSRP06213 1382 aa26.02■■□□□ 1.76
AC008060.1-201ENST00000401499 HNRNPUQ00839 825 aaKnown RBP eCLIP26.01■■□□□ 1.75
AC008060.1-201ENST00000401499 WDR43Q15061 677 aaKnown RBP eCLIP26.01■■□□□ 1.75
AC008060.1-201ENST00000401499 ADAMTS8Q9UP79 889 aa26.01■■□□□ 1.75
AC008060.1-201ENST00000401499 SLIT3O75094 1523 aa26■■□□□ 1.75
AC008060.1-201ENST00000401499 NFAT5O94916 1531 aa26■■□□□ 1.75
AC008060.1-201ENST00000401499 ROBO1Q9Y6N7 1651 aa26■■□□□ 1.75
AC008060.1-201ENST00000401499 SOX12O15370 315 aa25.99■■□□□ 1.75
AC008060.1-201ENST00000401499 TNS3Q68CZ2 1445 aa25.99■■□□□ 1.75
AC008060.1-201ENST00000401499 PPM1GO15355 546 aaPredicted RBP25.98■■□□□ 1.75
AC008060.1-201ENST00000401499 LTN1O94822 1766 aa25.98■■□□□ 1.75
AC008060.1-201ENST00000401499 MED1Q15648 1581 aaPredicted RBP25.96■■□□□ 1.75
AC008060.1-201ENST00000401499 CRYBG1Q9Y4K1 1723 aa25.96■■□□□ 1.75
AC008060.1-201ENST00000401499 USP19O94966 1318 aa25.96■■□□□ 1.75
AC008060.1-201ENST00000401499 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
AC008060.1-201ENST00000401499 MAP3K19Q56UN5 1328 aa25.96■■□□□ 1.75
AC008060.1-201ENST00000401499 PHRF1Q9P1Y6 1649 aaKnown RBP25.95■■□□□ 1.74
AC008060.1-201ENST00000401499 LMOD2Q6P5Q4 547 aa25.95■■□□□ 1.74
AC008060.1-201ENST00000401499 SPATA31A3Q5VYP0 1347 aa25.94■■□□□ 1.74
AC008060.1-201ENST00000401499 DIAPH1O60610 1272 aaKnown RBP25.92■■□□□ 1.74
AC008060.1-201ENST00000401499 AHDC1Q5TGY3 1603 aaPredicted RBP25.9■■□□□ 1.74
AC008060.1-201ENST00000401499 SENP3-EIF4A1A0A087X0R7 540 aa25.9■■□□□ 1.74
AC008060.1-201ENST00000401499 CENPBP07199 599 aaPredicted RBP25.9■■□□□ 1.74
AC008060.1-201ENST00000401499 FLT4P35916 1363 aa25.89■■□□□ 1.74
AC008060.1-201ENST00000401499 KCNH5Q8NCM2 988 aa25.89■■□□□ 1.73
AC008060.1-201ENST00000401499 ARHGEF10O15013 1369 aa25.88■■□□□ 1.73
AC008060.1-201ENST00000401499 IL13P35225 146 aa25.88■■□□□ 1.73
AC008060.1-201ENST00000401499 ZBED9Q6R2W3 1325 aa25.88■■□□□ 1.73
AC008060.1-201ENST00000401499 IQSEC2Q5JU85 1478 aa25.88■■□□□ 1.73
AC008060.1-201ENST00000401499 KIF24Q5T7B8 1368 aa25.87■■□□□ 1.73
AC008060.1-201ENST00000401499 GCP02774 474 aa25.87■■□□□ 1.73
AC008060.1-201ENST00000401499 NUDCQ9Y266 331 aa25.87■■□□□ 1.73
AC008060.1-201ENST00000401499 RGPD1P0DJD0 1748 aa25.87■■□□□ 1.73
AC008060.1-201ENST00000401499 HSP90AB2PQ58FF8 381 aa25.86■■□□□ 1.73
AC008060.1-201ENST00000401499 CCDC146Q8IYE0 955 aa25.86■■□□□ 1.73
AC008060.1-201ENST00000401499 U2SURPO15042 1029 aaKnown RBP25.86■■□□□ 1.73
AC008060.1-201ENST00000401499 PLEKHG5O94827 1062 aa25.86■■□□□ 1.73
AC008060.1-201ENST00000401499 U2AF1L5P0DN76 240 aaPredicted RBP25.86■■□□□ 1.73
AC008060.1-201ENST00000401499 U2AF1Q01081 240 aaKnown RBP eCLIP25.86■■□□□ 1.73
AC008060.1-201ENST00000401499 ABCA3Q99758 1704 aa25.85■■□□□ 1.73
AC008060.1-201ENST00000401499 RTL1A6NKG5 1358 aa25.84■■□□□ 1.73
AC008060.1-201ENST00000401499 AMPHP49418 695 aa25.84■■□□□ 1.73
AC008060.1-201ENST00000401499 HOXC9P31274 260 aa25.83■■□□□ 1.73
AC008060.1-201ENST00000401499 EIF4A2Q14240 407 aaKnown RBP25.83■■□□□ 1.73
AC008060.1-201ENST00000401499 TOM1O60784 492 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms