RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 CABLES1Q8TDN4 633 aa22.1■■□□□ 1.13
ATG4B-202ENST00000400771 NGLY1Q96IV0 654 aa22.1■■□□□ 1.13
ATG4B-202ENST00000400771 CABP2Q9NPB3 220 aa22.1■■□□□ 1.13
ATG4B-202ENST00000400771 CCDC61Q9Y6R9 512 aa22.1■■□□□ 1.13
ATG4B-202ENST00000400771 ACEP12821 1306 aa22.09■■□□□ 1.13
ATG4B-202ENST00000400771 NGDNQ8NEJ9 315 aaKnown RBP22.09■■□□□ 1.13
ATG4B-202ENST00000400771 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
ATG4B-202ENST00000400771 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.12
ATG4B-202ENST00000400771 USP54Q70EL1 1684 aa22.07■■□□□ 1.12
ATG4B-202ENST00000400771 SRPK2P78362 688 aaKnown RBP22.07■■□□□ 1.12
ATG4B-202ENST00000400771 USP6P35125 1406 aa22.06■■□□□ 1.12
ATG4B-202ENST00000400771 CARD11Q9BXL7 1154 aa22.06■■□□□ 1.12
ATG4B-202ENST00000400771 USP21Q9UK80 565 aa22.06■■□□□ 1.12
ATG4B-202ENST00000400771 LMO7Q8WWI1 1683 aa22.06■■□□□ 1.12
ATG4B-202ENST00000400771 SSH2Q76I76 1423 aa22.06■■□□□ 1.12
ATG4B-202ENST00000400771 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
ATG4B-202ENST00000400771 RXRBP28702 533 aa22.05■■□□□ 1.12
ATG4B-202ENST00000400771 EVC2Q86UK5 1308 aa22.05■■□□□ 1.12
ATG4B-202ENST00000400771 LMOD2Q6P5Q4 547 aa22.04■■□□□ 1.12
ATG4B-202ENST00000400771 QTRT2Q9H974 415 aaKnown RBP22.04■■□□□ 1.12
ATG4B-202ENST00000400771 SLIT3O75094 1523 aa22.03■■□□□ 1.12
ATG4B-202ENST00000400771 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
ATG4B-202ENST00000400771 RBM6P78332 1123 aaKnown RBP22.02■■□□□ 1.12
ATG4B-202ENST00000400771 EP400Q96L91 3159 aa22.01■■□□□ 1.11
ATG4B-202ENST00000400771 TRPC5Q9UL62 973 aaPredicted RBP22.01■■□□□ 1.11
ATG4B-202ENST00000400771 ATAD2Q6PL18 1390 aa22■■□□□ 1.11
ATG4B-202ENST00000400771 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
ATG4B-202ENST00000400771 PLEKHG5O94827 1062 aa22■■□□□ 1.11
ATG4B-202ENST00000400771 USP19O94966 1318 aa22■■□□□ 1.11
ATG4B-202ENST00000400771 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
ATG4B-202ENST00000400771 MYOM1P52179 1685 aa21.99■■□□□ 1.11
ATG4B-202ENST00000400771 PAK3O75914 559 aaPredicted RBP21.98■■□□□ 1.11
ATG4B-202ENST00000400771 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
ATG4B-202ENST00000400771 COL18A1P39060 1754 aa21.97■■□□□ 1.11
ATG4B-202ENST00000400771 UNC5CLQ8IV45 518 aa21.97■■□□□ 1.11
ATG4B-202ENST00000400771 THSD7AQ9UPZ6 1657 aa21.97■■□□□ 1.11
ATG4B-202ENST00000400771 HAP1P54257 671 aaPredicted RBP21.96■■□□□ 1.11
ATG4B-202ENST00000400771 TESK2Q96S53 571 aa21.96■■□□□ 1.11
ATG4B-202ENST00000400771 FAM83GA6ND36 823 aa21.95■■□□□ 1.1
ATG4B-202ENST00000400771 USP47Q96K76 1375 aa21.95■■□□□ 1.1
ATG4B-202ENST00000400771 KIAA0232Q92628 1395 aa21.94■■□□□ 1.1
ATG4B-202ENST00000400771 RGPD5Q99666 1765 aa21.94■■□□□ 1.1
ATG4B-202ENST00000400771 WNK3Q9BYP7 1800 aa21.94■■□□□ 1.1
ATG4B-202ENST00000400771 NFAT5O94916 1531 aa21.93■■□□□ 1.1
ATG4B-202ENST00000400771 NUTM2GQ5VZR2 741 aa21.93■■□□□ 1.1
ATG4B-202ENST00000400771 GJD4Q96KN9 370 aaPredicted RBP21.92■■□□□ 1.1
ATG4B-202ENST00000400771 CAMTA1Q9Y6Y1 1673 aa21.91■■□□□ 1.1
ATG4B-202ENST00000400771 CPDO75976 1380 aa21.91■■□□□ 1.1
ATG4B-202ENST00000400771 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
ATG4B-202ENST00000400771 LTN1O94822 1766 aa21.91■■□□□ 1.1
ATG4B-202ENST00000400771 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
ATG4B-202ENST00000400771 VPS72Q15906 364 aa21.9■■□□□ 1.1
ATG4B-202ENST00000400771 ABTB2Q8N961 1025 aa21.89■■□□□ 1.09
ATG4B-202ENST00000400771 BTG4Q9NY30 223 aa21.87■■□□□ 1.09
ATG4B-202ENST00000400771 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
ATG4B-202ENST00000400771 KTN1Q86UP2 1357 aaKnown RBP21.87■■□□□ 1.09
ATG4B-202ENST00000400771 TTC21BQ7Z4L5 1316 aa21.86■■□□□ 1.09
ATG4B-202ENST00000400771 UPF1Q92900 1129 aaKnown RBP eCLIP21.86■■□□□ 1.09
ATG4B-202ENST00000400771 PRDM11Q9NQV5 511 aa21.86■■□□□ 1.09
ATG4B-202ENST00000400771 KIF20BQ96Q89 1820 aa21.85■■□□□ 1.09
ATG4B-202ENST00000400771 COL5A2P05997 1499 aaPredicted RBP21.84■■□□□ 1.09
ATG4B-202ENST00000400771 EDC4Q6P2E9 1401 aaKnown RBP21.84■■□□□ 1.09
ATG4B-202ENST00000400771 CHRNA2Q15822 529 aa21.84■■□□□ 1.09
ATG4B-202ENST00000400771 PUS7Q96PZ0 661 aaKnown RBP21.84■■□□□ 1.09
ATG4B-202ENST00000400771 ABCC6O95255 1503 aa21.84■■□□□ 1.09
ATG4B-202ENST00000400771 TTC21AQ8NDW8 1320 aa21.83■■□□□ 1.09
ATG4B-202ENST00000400771 ZC3H6P61129 1189 aaKnown RBP21.83■■□□□ 1.09
ATG4B-202ENST00000400771 NLRP13Q86W25 1043 aa21.83■■□□□ 1.09
ATG4B-202ENST00000400771 NINLQ9Y2I6 1382 aa21.83■■□□□ 1.08
ATG4B-202ENST00000400771 PARP4Q9UKK3 1724 aaKnown RBP21.83■■□□□ 1.08
ATG4B-202ENST00000400771 ZNF692Q9BU19 519 aaPredicted RBP21.82■■□□□ 1.08
ATG4B-202ENST00000400771 OVOS2A0A0J9YW53 1432 aa21.81■■□□□ 1.08
ATG4B-202ENST00000400771 OVOS2Q6IE36 1432 aa21.81■■□□□ 1.08
ATG4B-202ENST00000400771 GCP02774 474 aa21.81■■□□□ 1.08
ATG4B-202ENST00000400771 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
ATG4B-202ENST00000400771 SPATA31A5Q5VU36 1347 aa21.8■■□□□ 1.08
ATG4B-202ENST00000400771 SPATA31A7Q8IWB4 1347 aa21.8■■□□□ 1.08
ATG4B-202ENST00000400771 USP31Q70CQ4 1352 aa21.8■■□□□ 1.08
ATG4B-202ENST00000400771 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
ATG4B-202ENST00000400771 ONECUT3O60422 494 aaPredicted RBP21.79■■□□□ 1.08
ATG4B-202ENST00000400771 NLRP6P59044 892 aa21.79■■□□□ 1.08
ATG4B-202ENST00000400771 TNS1Q9HBL0 1735 aaKnown RBP21.79■■□□□ 1.08
ATG4B-202ENST00000400771 LRRC37A3O60309 1634 aa21.78■■□□□ 1.08
ATG4B-202ENST00000400771 AATKQ6ZMQ8 1374 aa21.76■■□□□ 1.07
ATG4B-202ENST00000400771 SPATA31A1Q5TZJ5 1347 aa21.76■■□□□ 1.07
ATG4B-202ENST00000400771 ANKRD36BQ8N2N9 1353 aa21.75■■□□□ 1.07
ATG4B-202ENST00000400771 RGPD1P0DJD0 1748 aa21.75■■□□□ 1.07
ATG4B-202ENST00000400771 SEPT12Q8IYM1 358 aa21.75■■□□□ 1.07
ATG4B-202ENST00000400771 TMC1Q8TDI8 760 aa21.75■■□□□ 1.07
ATG4B-202ENST00000400771 ZRANB1Q9UGI0 708 aa21.75■■□□□ 1.07
ATG4B-202ENST00000400771 CCDC9Q9Y3X0 531 aaKnown RBP21.75■■□□□ 1.07
ATG4B-202ENST00000400771 NME9Q86XW9 330 aa21.74■■□□□ 1.07
ATG4B-202ENST00000400771 FAM98CQ17RN3 349 aaKnown RBP21.73■■□□□ 1.07
ATG4B-202ENST00000400771 PEAK1Q9H792 1746 aa21.72■■□□□ 1.07
ATG4B-202ENST00000400771 HDGFL2Q7Z4V5 671 aaPredicted RBP21.72■■□□□ 1.07
ATG4B-202ENST00000400771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.72■■□□□ 1.071e-8■□□□□ 9.2
ATG4B-202ENST00000400771 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
ATG4B-202ENST00000400771 ANKRD26Q9UPS8 1709 aa21.72■■□□□ 1.07
ATG4B-202ENST00000400771 TMF1P82094 1093 aa21.71■■□□□ 1.07
ATG4B-202ENST00000400771 STRN4Q9NRL3 753 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms