RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 NOS1P29475 1434 aa17.69■□□□□ 0.42
GABPA-202ENST00000400075 TRDNQ13061 729 aa17.69■□□□□ 0.42
GABPA-202ENST00000400075 GNAI3P08754 354 aa17.69■□□□□ 0.42
GABPA-202ENST00000400075 TCEAL9Q9UHQ7 104 aa17.69■□□□□ 0.42
GABPA-202ENST00000400075 ZNF652Q9Y2D9 606 aa17.69■□□□□ 0.42
GABPA-202ENST00000400075 UHRF1BP1Q6BDS2 1440 aa17.69■□□□□ 0.42
GABPA-202ENST00000400075 AMOTQ4VCS5 1084 aa17.68■□□□□ 0.42
GABPA-202ENST00000400075 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
GABPA-202ENST00000400075 ERICH6BQ5W0A0 696 aa17.68■□□□□ 0.42
GABPA-202ENST00000400075 C14orf93Q9H972 538 aaKnown RBP17.68■□□□□ 0.42
GABPA-202ENST00000400075 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
GABPA-202ENST00000400075 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
GABPA-202ENST00000400075 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
GABPA-202ENST00000400075 NRDCO43847 1150 aa17.67■□□□□ 0.42
GABPA-202ENST00000400075 SPRYD3Q8NCJ5 442 aa17.67■□□□□ 0.42
GABPA-202ENST00000400075 CHMP4CQ96CF2 233 aa17.67■□□□□ 0.42
GABPA-202ENST00000400075 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
GABPA-202ENST00000400075 RAPGEF6Q8TEU7 1601 aa17.67■□□□□ 0.42
GABPA-202ENST00000400075 NUP160Q12769 1436 aa17.67■□□□□ 0.42
GABPA-202ENST00000400075 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
GABPA-202ENST00000400075 GNL3LQ9NVN8 582 aaKnown RBP17.66■□□□□ 0.42
GABPA-202ENST00000400075 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
GABPA-202ENST00000400075 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
GABPA-202ENST00000400075 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
GABPA-202ENST00000400075 FYB1O15117 783 aa17.65■□□□□ 0.42
GABPA-202ENST00000400075 GOLGA6L6A8MZA4 724 aa17.65■□□□□ 0.42
GABPA-202ENST00000400075 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
GABPA-202ENST00000400075 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
GABPA-202ENST00000400075 ERC2O15083 957 aa17.65■□□□□ 0.42
GABPA-202ENST00000400075 TRIM44Q96DX7 344 aaPredicted RBP17.65■□□□□ 0.42
GABPA-202ENST00000400075 TRAPPC8Q9Y2L5 1435 aa17.65■□□□□ 0.42
GABPA-202ENST00000400075 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
GABPA-202ENST00000400075 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.42
GABPA-202ENST00000400075 ADAMTS12P58397 1594 aa17.64■□□□□ 0.42
GABPA-202ENST00000400075 ACEP12821 1306 aa17.64■□□□□ 0.41
GABPA-202ENST00000400075 FCHSD2O94868 740 aa17.64■□□□□ 0.41
GABPA-202ENST00000400075 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
GABPA-202ENST00000400075 PTPN23Q9H3S7 1636 aa17.64■□□□□ 0.41
GABPA-202ENST00000400075 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
GABPA-202ENST00000400075 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
GABPA-202ENST00000400075 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
GABPA-202ENST00000400075 NSD3Q9BZ95 1437 aa17.62■□□□□ 0.41
GABPA-202ENST00000400075 AK7Q96M32 723 aa17.62■□□□□ 0.41
GABPA-202ENST00000400075 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
GABPA-202ENST00000400075 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
GABPA-202ENST00000400075 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
GABPA-202ENST00000400075 ERICH2A1L162 156 aa17.61■□□□□ 0.41
GABPA-202ENST00000400075 CCDC57Q2TAC2 916 aa17.61■□□□□ 0.41
GABPA-202ENST00000400075 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
GABPA-202ENST00000400075 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
GABPA-202ENST00000400075 KCNA6P17658 529 aa17.6■□□□□ 0.41
GABPA-202ENST00000400075 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
GABPA-202ENST00000400075 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
GABPA-202ENST00000400075 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
GABPA-202ENST00000400075 ST18O60284 1047 aa17.59■□□□□ 0.41
GABPA-202ENST00000400075 IKQ13123 557 aaPredicted RBP17.59■□□□□ 0.41
GABPA-202ENST00000400075 IFNL2Q8IZJ0 200 aa17.59■□□□□ 0.41
GABPA-202ENST00000400075 DDB1Q16531 1140 aa17.58■□□□□ 0.41
GABPA-202ENST00000400075 ANKRD24Q8TF21 1146 aa17.58■□□□□ 0.4
GABPA-202ENST00000400075 ZNF428Q96B54 188 aa17.58■□□□□ 0.4
GABPA-202ENST00000400075 NBPF14Q5TI25 921 aa17.58■□□□□ 0.4
GABPA-202ENST00000400075 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
GABPA-202ENST00000400075 CPLX1O14810 134 aa17.58■□□□□ 0.4
GABPA-202ENST00000400075 SF3A1Q15459 793 aaKnown RBP17.58■□□□□ 0.4
GABPA-202ENST00000400075 FAM184AQ8NB25 1140 aa17.58■□□□□ 0.4
GABPA-202ENST00000400075 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
GABPA-202ENST00000400075 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
GABPA-202ENST00000400075 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
GABPA-202ENST00000400075 ATP10AO60312 1499 aa17.56■□□□□ 0.4
GABPA-202ENST00000400075 RALYLQ86SE5 291 aaKnown RBP17.56■□□□□ 0.4
GABPA-202ENST00000400075 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
GABPA-202ENST00000400075 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
GABPA-202ENST00000400075 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
GABPA-202ENST00000400075 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
GABPA-202ENST00000400075 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
GABPA-202ENST00000400075 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
GABPA-202ENST00000400075 RRP1P56182 461 aaKnown RBP17.55■□□□□ 0.4
GABPA-202ENST00000400075 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
GABPA-202ENST00000400075 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
GABPA-202ENST00000400075 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
GABPA-202ENST00000400075 CRBNQ96SW2 442 aa17.55■□□□□ 0.4
GABPA-202ENST00000400075 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
GABPA-202ENST00000400075 REC8O95072 547 aa17.54■□□□□ 0.4
GABPA-202ENST00000400075 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
GABPA-202ENST00000400075 DUOX2Q9NRD8 1548 aa17.54■□□□□ 0.4
GABPA-202ENST00000400075 H3BQV1 296 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
GABPA-202ENST00000400075 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 TRIM29Q14134 588 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
GABPA-202ENST00000400075 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 GNAI2P04899 355 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 RFC4P35249 363 aa17.53■□□□□ 0.4
GABPA-202ENST00000400075 ERC1Q8IUD2 1116 aa17.52■□□□□ 0.4
GABPA-202ENST00000400075 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
GABPA-202ENST00000400075 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
GABPA-202ENST00000400075 ANO2Q9NQ90 1003 aa17.52■□□□□ 0.4
GABPA-202ENST00000400075 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.39
GABPA-202ENST00000400075 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms