RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 NPATQ14207 1427 aa16.86■□□□□ 0.29
SIRPA-203ENST00000400068 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
SIRPA-203ENST00000400068 RLBP1P12271 317 aa16.86■□□□□ 0.29
SIRPA-203ENST00000400068 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
SIRPA-203ENST00000400068 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
SIRPA-203ENST00000400068 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
SIRPA-203ENST00000400068 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
SIRPA-203ENST00000400068 EIF2AK4Q9P2K8 1649 aaKnown RBP16.85■□□□□ 0.29
SIRPA-203ENST00000400068 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
SIRPA-203ENST00000400068 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
SIRPA-203ENST00000400068 KDM5DQ9BY66 1539 aa16.84■□□□□ 0.29
SIRPA-203ENST00000400068 ABCC1P33527 1531 aa16.84■□□□□ 0.29
SIRPA-203ENST00000400068 YEATS2Q9ULM3 1422 aa16.84■□□□□ 0.29
SIRPA-203ENST00000400068 FCHSD2O94868 740 aa16.83■□□□□ 0.29
SIRPA-203ENST00000400068 ADCY10Q96PN6 1610 aa16.83■□□□□ 0.29
SIRPA-203ENST00000400068 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
SIRPA-203ENST00000400068 TRIM27P14373 513 aa16.82■□□□□ 0.28
SIRPA-203ENST00000400068 ESCO1Q5FWF5 840 aa16.82■□□□□ 0.28
SIRPA-203ENST00000400068 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
SIRPA-203ENST00000400068 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
SIRPA-203ENST00000400068 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
SIRPA-203ENST00000400068 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
SIRPA-203ENST00000400068 PAXIP1Q6ZW49 1069 aaPredicted RBP16.82■□□□□ 0.28
SIRPA-203ENST00000400068 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
SIRPA-203ENST00000400068 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
SIRPA-203ENST00000400068 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
SIRPA-203ENST00000400068 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
SIRPA-203ENST00000400068 RILPL2Q969X0 211 aa16.8■□□□□ 0.28
SIRPA-203ENST00000400068 PHACTR3Q96KR7 559 aa16.8■□□□□ 0.28
SIRPA-203ENST00000400068 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
SIRPA-203ENST00000400068 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
SIRPA-203ENST00000400068 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
SIRPA-203ENST00000400068 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
SIRPA-203ENST00000400068 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
SIRPA-203ENST00000400068 TEFQ10587 303 aa16.79■□□□□ 0.28
SIRPA-203ENST00000400068 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
SIRPA-203ENST00000400068 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
SIRPA-203ENST00000400068 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
SIRPA-203ENST00000400068 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
SIRPA-203ENST00000400068 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
SIRPA-203ENST00000400068 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
SIRPA-203ENST00000400068 NCBP3Q53F19 620 aaKnown RBP16.78■□□□□ 0.28
SIRPA-203ENST00000400068 CCDC9Q9Y3X0 531 aaKnown RBP16.78■□□□□ 0.28
SIRPA-203ENST00000400068 KCNJ4P48050 445 aa16.78■□□□□ 0.28
SIRPA-203ENST00000400068 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
SIRPA-203ENST00000400068 POGZQ7Z3K3 1410 aa16.78■□□□□ 0.28
SIRPA-203ENST00000400068 HMMRO75330 724 aa16.77■□□□□ 0.28
SIRPA-203ENST00000400068 THEMISQ8N1K5 641 aaPredicted RBP16.77■□□□□ 0.28
SIRPA-203ENST00000400068 UHRF1BP1LA0JNW5 1464 aa16.77■□□□□ 0.27
SIRPA-203ENST00000400068 PIK3C2GO75747 1445 aa16.76■□□□□ 0.27
SIRPA-203ENST00000400068 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
SIRPA-203ENST00000400068 PTPRTO14522 1441 aa16.76■□□□□ 0.27
SIRPA-203ENST00000400068 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
SIRPA-203ENST00000400068 KRT24Q2M2I5 525 aa16.76■□□□□ 0.27
SIRPA-203ENST00000400068 FOXD4L6Q3SYB3 417 aaPredicted RBP16.75■□□□□ 0.27
SIRPA-203ENST00000400068 FOXD4L3Q6VB84 417 aaPredicted RBP16.75■□□□□ 0.27
SIRPA-203ENST00000400068 ZMYND15Q9H091 742 aa16.75■□□□□ 0.27
SIRPA-203ENST00000400068 ACEP12821 1306 aa16.75■□□□□ 0.27
SIRPA-203ENST00000400068 PRDM15P57071 1507 aaPredicted RBP16.74■□□□□ 0.27
SIRPA-203ENST00000400068 TSPYL6Q8N831 410 aa16.74■□□□□ 0.27
SIRPA-203ENST00000400068 ZFYVE16Q7Z3T8 1539 aa16.73■□□□□ 0.27
SIRPA-203ENST00000400068 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
SIRPA-203ENST00000400068 F6X3S4 739 aa16.73■□□□□ 0.27
SIRPA-203ENST00000400068 RIMS2Q9UQ26 1411 aa16.73■□□□□ 0.27
SIRPA-203ENST00000400068 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
SIRPA-203ENST00000400068 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
SIRPA-203ENST00000400068 CHMP3Q9Y3E7 222 aa16.72■□□□□ 0.27
SIRPA-203ENST00000400068 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
SIRPA-203ENST00000400068 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
SIRPA-203ENST00000400068 GSE1Q14687 1217 aa16.71■□□□□ 0.27
SIRPA-203ENST00000400068 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.27
SIRPA-203ENST00000400068 SEC24BO95487 1268 aa16.7■□□□□ 0.26
SIRPA-203ENST00000400068 CDK11BP21127 795 aaKnown RBP16.7■□□□□ 0.26
SIRPA-203ENST00000400068 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
SIRPA-203ENST00000400068 TRPM2O94759 1503 aa16.69■□□□□ 0.26
SIRPA-203ENST00000400068 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
SIRPA-203ENST00000400068 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
SIRPA-203ENST00000400068 FOXO3O43524 673 aa16.69■□□□□ 0.26
SIRPA-203ENST00000400068 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
SIRPA-203ENST00000400068 NAP1L2Q9ULW6 460 aaPredicted RBP16.69■□□□□ 0.26
SIRPA-203ENST00000400068 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
SIRPA-203ENST00000400068 TNRQ92752 1358 aa16.68■□□□□ 0.26
SIRPA-203ENST00000400068 ZMYM4Q5VZL5 1548 aa16.68■□□□□ 0.26
SIRPA-203ENST00000400068 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
SIRPA-203ENST00000400068 PROSER2Q86WR7 435 aaPredicted RBP16.68■□□□□ 0.26
SIRPA-203ENST00000400068 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
SIRPA-203ENST00000400068 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
SIRPA-203ENST00000400068 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
SIRPA-203ENST00000400068 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
SIRPA-203ENST00000400068 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
SIRPA-203ENST00000400068 TRIM44Q96DX7 344 aaPredicted RBP16.67■□□□□ 0.26
SIRPA-203ENST00000400068 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
SIRPA-203ENST00000400068 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
SIRPA-203ENST00000400068 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
SIRPA-203ENST00000400068 NSD2O96028 1365 aa16.67■□□□□ 0.26
SIRPA-203ENST00000400068 CT47B1P0C2W7 299 aaPredicted RBP16.66■□□□□ 0.26
SIRPA-203ENST00000400068 C9orf78Q9NZ63 289 aaPredicted RBP16.66■□□□□ 0.26
SIRPA-203ENST00000400068 MCCP23508 829 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 AAMPQ13685 434 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms