RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SPDYE4A6NLX3 237 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 STAMBPO95630 424 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 MCM4P33991 863 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 ZWINTO95229 277 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
CHD8-201ENST00000399982 IVLP07476 585 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 RBM10P98175 930 aaKnown RBP9.93□□□□□ -0.82
CHD8-201ENST00000399982 CLCN1P35523 988 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 SSR1P43307 286 aaKnown RBP9.93□□□□□ -0.82
CHD8-201ENST00000399982 LUZP1Q86V48 1076 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 MIA2Q96PC5 1412 aa9.93□□□□□ -0.82
CHD8-201ENST00000399982 IRX3P78415 501 aaPredicted RBP9.93□□□□□ -0.82
CHD8-201ENST00000399982 SAFBQ15424 915 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHD8-201ENST00000399982 MAGEC2Q9UBF1 373 aaPredicted RBP9.93□□□□□ -0.82
CHD8-201ENST00000399982 MATR3P43243 847 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHD8-201ENST00000399982 HMGB1P09429 215 aaKnown RBP9.92□□□□□ -0.82
CHD8-201ENST00000399982 TUBB4BP68371 445 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 CCDC27Q2M243 656 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 UBXN4Q92575 508 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 ERC2O15083 957 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 FAM193AP78312 1265 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 JMYQ8N9B5 988 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 SOGA3Q5TF21 947 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 CDK5RAP3Q96JB5 506 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
CHD8-201ENST00000399982 SMG6Q86US8 1419 aaKnown RBP9.92□□□□□ -0.82
CHD8-201ENST00000399982 CAVIN2O95810 425 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 PKD2Q13563 968 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
CHD8-201ENST00000399982 C11orf95C9JLR9 678 aaPredicted RBP9.92□□□□□ -0.82
CHD8-201ENST00000399982 CCDC175P0C221 793 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 RBM25P49756 843 aaKnown RBP9.92□□□□□ -0.82
CHD8-201ENST00000399982 HS1BP3Q53T59 392 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 SPATA24Q86W54 205 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
CHD8-201ENST00000399982 CCDC91Q7Z6B0 441 aa9.91□□□□□ -0.82
CHD8-201ENST00000399982 SYTL4Q96C24 671 aaPredicted RBP9.91□□□□□ -0.82
CHD8-201ENST00000399982 CBX1P83916 185 aa9.91□□□□□ -0.82
CHD8-201ENST00000399982 HIP1O00291 1037 aa9.91□□□□□ -0.82
CHD8-201ENST00000399982 CFAP57Q96MR6 1250 aa9.91□□□□□ -0.82
CHD8-201ENST00000399982 LRRCC1Q9C099 1032 aa9.91□□□□□ -0.82
CHD8-201ENST00000399982 SDF4Q9BRK5 362 aa9.91□□□□□ -0.82
CHD8-201ENST00000399982 ZNHIT6Q9NWK9 470 aaKnown RBP9.9□□□□□ -0.82
CHD8-201ENST00000399982 KIF20AO95235 890 aa9.9□□□□□ -0.82
CHD8-201ENST00000399982 KRT18P05783 430 aaKnown RBP9.9□□□□□ -0.82
CHD8-201ENST00000399982 KIF18AQ8NI77 898 aa9.9□□□□□ -0.82
CHD8-201ENST00000399982 PLEKHH1Q9ULM0 1364 aa9.9□□□□□ -0.82
CHD8-201ENST00000399982 KIAA1328Q86T90 577 aa9.9□□□□□ -0.82
CHD8-201ENST00000399982 L3MBTL2Q969R5 705 aa9.9□□□□□ -0.82
CHD8-201ENST00000399982 SLC26A8Q96RN1 970 aa9.9□□□□□ -0.82
CHD8-201ENST00000399982 ZSCAN12O43309 604 aa9.9□□□□□ -0.83
CHD8-201ENST00000399982 RBM28Q9NW13 759 aaKnown RBP9.9□□□□□ -0.83
CHD8-201ENST00000399982 AMPHP49418 695 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 CCDC181Q5TID7 509 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 GCC1Q96CN9 775 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 VPS37CA5D8V6 355 aaPredicted RBP9.89□□□□□ -0.83
CHD8-201ENST00000399982 ANAPC15P60006 121 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 ANKRD1Q15327 319 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 PAXBP1Q9Y5B6 917 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 GOLGA6L9A6NEM1 432 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 BMS1Q14692 1282 aaKnown RBP9.89□□□□□ -0.83
CHD8-201ENST00000399982 SMAP1Q8IYB5 467 aaPredicted RBP9.89□□□□□ -0.83
CHD8-201ENST00000399982 CFAP45Q9UL16 551 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 NACADO15069 1562 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 SMC2O95347 1197 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
CHD8-201ENST00000399982 TTC16Q8NEE8 873 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 ZNF526Q8TF50 670 aaPredicted RBP9.88□□□□□ -0.83
CHD8-201ENST00000399982 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
CHD8-201ENST00000399982 DESP17661 470 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 CCDC146Q8IYE0 955 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 PPP1R1BQ9UD71 204 aaPredicted RBP9.88□□□□□ -0.83
CHD8-201ENST00000399982 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 DHX29Q7Z478 1369 aaKnown RBP9.88□□□□□ -0.83
CHD8-201ENST00000399982 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 USP47Q96K76 1375 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 XBP1P17861 261 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 MAP2K1Q02750 393 aaPredicted RBP9.88□□□□□ -0.83
CHD8-201ENST00000399982 CCDC144AA2RUR9 1427 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 CRACR2AQ9BSW2 395 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 HOMER2Q9NSB8 354 aa9.88□□□□□ -0.83
CHD8-201ENST00000399982 TERF1P54274 439 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 UVSSAQ2YD98 709 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 ZHX3Q9H4I2 956 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 SMTNL1A8MU46 457 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 SETSIPP0DME0 302 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 C1orf141Q5JVX7 400 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 SERPINA10Q9UK55 444 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 COMMD10Q9Y6G5 202 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 CCDC18Q5T9S5 1454 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 CEP57L1Q8IYX8 460 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 NUP155O75694 1391 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 KIF3BO15066 747 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 GTF2A1P52655 376 aaPredicted RBP9.87□□□□□ -0.83
CHD8-201ENST00000399982 KRT222Q8N1A0 295 aa9.87□□□□□ -0.83
CHD8-201ENST00000399982 TXLNAP40222 546 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 CCDC83Q8IWF9 413 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 CCDC7Q96M83 1385 aa9.86□□□□□ -0.83
CHD8-201ENST00000399982 PLEKHH2Q8IVE3 1493 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms