RNA–Protein interactions for RNA: ENST00000399543.1

AC025171.2-203, humanhuman

TSL 1 (best)

Gene AC025171.2, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025171.2-203ENST00000399543 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
AC025171.2-203ENST00000399543 CD163L1Q9NR16 1453 aa16.68■□□□□ 0.26
AC025171.2-203ENST00000399543 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
AC025171.2-203ENST00000399543 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
AC025171.2-203ENST00000399543 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
AC025171.2-203ENST00000399543 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
AC025171.2-203ENST00000399543 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 ZKSCAN2Q63HK3 967 aa16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 YEATS2Q9ULM3 1422 aa16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 FYB1O15117 783 aa16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 RWDD1Q9H446 243 aaPredicted RBP16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 MED14O60244 1454 aa16.67■□□□□ 0.26
AC025171.2-203ENST00000399543 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
AC025171.2-203ENST00000399543 EXOSC9Q06265 439 aaKnown RBP16.65■□□□□ 0.26
AC025171.2-203ENST00000399543 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
AC025171.2-203ENST00000399543 MINK1Q8N4C8 1332 aaPredicted RBP16.65■□□□□ 0.26
AC025171.2-203ENST00000399543 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
AC025171.2-203ENST00000399543 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
AC025171.2-203ENST00000399543 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
AC025171.2-203ENST00000399543 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
AC025171.2-203ENST00000399543 TRIM27P14373 513 aa16.63■□□□□ 0.25
AC025171.2-203ENST00000399543 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
AC025171.2-203ENST00000399543 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
AC025171.2-203ENST00000399543 PNPLA6Q8IY17 1366 aa16.62■□□□□ 0.25
AC025171.2-203ENST00000399543 BECN1Q14457 450 aa16.61■□□□□ 0.25
AC025171.2-203ENST00000399543 IL16Q14005 1332 aa16.61■□□□□ 0.25
AC025171.2-203ENST00000399543 POGKQ9P215 609 aa16.61■□□□□ 0.25
AC025171.2-203ENST00000399543 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
AC025171.2-203ENST00000399543 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
AC025171.2-203ENST00000399543 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
AC025171.2-203ENST00000399543 ATF7IPQ6VMQ6 1270 aa16.6■□□□□ 0.25
AC025171.2-203ENST00000399543 UPF2Q9HAU5 1272 aaKnown RBP16.6■□□□□ 0.25
AC025171.2-203ENST00000399543 RIPK4P57078 832 aa16.59■□□□□ 0.25
AC025171.2-203ENST00000399543 DIAPH1O60610 1272 aaKnown RBP16.58■□□□□ 0.25
AC025171.2-203ENST00000399543 HDAC1Q13547 482 aaPredicted RBP16.58■□□□□ 0.25
AC025171.2-203ENST00000399543 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.25
AC025171.2-203ENST00000399543 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.25
AC025171.2-203ENST00000399543 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.24
AC025171.2-203ENST00000399543 CDK19Q9BWU1 502 aa16.58■□□□□ 0.24
AC025171.2-203ENST00000399543 CDC42BPGQ6DT37 1551 aa16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 CABP1Q9NZU7 370 aa16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 NOB1Q9ULX3 412 aaKnown RBP16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 BRPF3Q9ULD4 1205 aa16.57■□□□□ 0.24
AC025171.2-203ENST00000399543 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
AC025171.2-203ENST00000399543 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
AC025171.2-203ENST00000399543 ZBTB40Q9NUA8 1239 aa16.55■□□□□ 0.24
AC025171.2-203ENST00000399543 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
AC025171.2-203ENST00000399543 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
AC025171.2-203ENST00000399543 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
AC025171.2-203ENST00000399543 FCHSD2O94868 740 aa16.54■□□□□ 0.24
AC025171.2-203ENST00000399543 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
AC025171.2-203ENST00000399543 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
AC025171.2-203ENST00000399543 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
AC025171.2-203ENST00000399543 FBLN1P23142 703 aa16.52■□□□□ 0.24
AC025171.2-203ENST00000399543 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
AC025171.2-203ENST00000399543 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 ATP7BP35670 1465 aa16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
AC025171.2-203ENST00000399543 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
AC025171.2-203ENST00000399543 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
AC025171.2-203ENST00000399543 PPIP5K1Q6PFW1 1433 aa16.5■□□□□ 0.23
AC025171.2-203ENST00000399543 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
AC025171.2-203ENST00000399543 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
AC025171.2-203ENST00000399543 ADRA2BP18089 450 aa16.48■□□□□ 0.23
AC025171.2-203ENST00000399543 MFAP1P55081 439 aaKnown RBP16.48■□□□□ 0.23
AC025171.2-203ENST00000399543 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
AC025171.2-203ENST00000399543 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
AC025171.2-203ENST00000399543 KCNA4P22459 653 aa16.48■□□□□ 0.23
AC025171.2-203ENST00000399543 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
AC025171.2-203ENST00000399543 NUCB1Q02818 461 aa16.46■□□□□ 0.23
AC025171.2-203ENST00000399543 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
AC025171.2-203ENST00000399543 HMOX1P09601 288 aa16.46■□□□□ 0.23
AC025171.2-203ENST00000399543 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
AC025171.2-203ENST00000399543 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
AC025171.2-203ENST00000399543 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
AC025171.2-203ENST00000399543 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
AC025171.2-203ENST00000399543 SPATA31D1Q6ZQQ2 1576 aa16.44■□□□□ 0.22
AC025171.2-203ENST00000399543 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
AC025171.2-203ENST00000399543 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
AC025171.2-203ENST00000399543 VAMP4O75379 141 aa16.44■□□□□ 0.22
AC025171.2-203ENST00000399543 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
AC025171.2-203ENST00000399543 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
AC025171.2-203ENST00000399543 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
AC025171.2-203ENST00000399543 AGLP35573 1532 aa16.43■□□□□ 0.22
AC025171.2-203ENST00000399543 TSPYL6Q8N831 410 aa16.43■□□□□ 0.22
AC025171.2-203ENST00000399543 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
AC025171.2-203ENST00000399543 CDK12Q9NYV4 1490 aaPredicted RBP16.43■□□□□ 0.22
AC025171.2-203ENST00000399543 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms