RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 IL27Q8NEV9 243 aa17.19■□□□□ 0.34
TNRC18-203ENST00000399537 FILIP1LQ4L180 1135 aa17.19■□□□□ 0.34
TNRC18-203ENST00000399537 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
TNRC18-203ENST00000399537 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
TNRC18-203ENST00000399537 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
TNRC18-203ENST00000399537 ZNF396Q96N95 335 aaPredicted RBP17.18■□□□□ 0.34
TNRC18-203ENST00000399537 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
TNRC18-203ENST00000399537 CCDC66A2RUB6 948 aa17.18■□□□□ 0.34
TNRC18-203ENST00000399537 MBD3O95983 291 aa17.18■□□□□ 0.34
TNRC18-203ENST00000399537 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
TNRC18-203ENST00000399537 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
TNRC18-203ENST00000399537 ENOX2Q16206 610 aaKnown RBP17.17■□□□□ 0.34
TNRC18-203ENST00000399537 SEPT7Q16181 437 aaKnown RBP17.16■□□□□ 0.34
TNRC18-203ENST00000399537 PDCP20941 246 aa17.16■□□□□ 0.34
TNRC18-203ENST00000399537 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
TNRC18-203ENST00000399537 KIF6Q6ZMV9 814 aa17.16■□□□□ 0.34
TNRC18-203ENST00000399537 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
TNRC18-203ENST00000399537 NEFHP12036 1026 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
TNRC18-203ENST00000399537 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
TNRC18-203ENST00000399537 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 FMNL2Q96PY5 1086 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 KIAA0754O94854 1291 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 RABEP1Q15276 862 aa17.15■□□□□ 0.34
TNRC18-203ENST00000399537 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.34
TNRC18-203ENST00000399537 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.33
TNRC18-203ENST00000399537 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
TNRC18-203ENST00000399537 SPC24Q8NBT2 197 aa17.14■□□□□ 0.33
TNRC18-203ENST00000399537 HIP1O00291 1037 aa17.14■□□□□ 0.33
TNRC18-203ENST00000399537 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
TNRC18-203ENST00000399537 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
TNRC18-203ENST00000399537 STK38Q15208 465 aa17.13■□□□□ 0.33
TNRC18-203ENST00000399537 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
TNRC18-203ENST00000399537 STIM1Q13586 685 aa17.13■□□□□ 0.33
TNRC18-203ENST00000399537 CEBPZQ03701 1054 aaKnown RBP17.13■□□□□ 0.33
TNRC18-203ENST00000399537 ATF3P18847 181 aa17.12■□□□□ 0.33
TNRC18-203ENST00000399537 FIBPO43427 364 aa17.12■□□□□ 0.33
TNRC18-203ENST00000399537 NUTM2GQ5VZR2 741 aa17.12■□□□□ 0.33
TNRC18-203ENST00000399537 CENPHQ9H3R5 247 aa17.11■□□□□ 0.33
TNRC18-203ENST00000399537 LUC7LQ9NQ29 371 aaKnown RBP17.11■□□□□ 0.33
TNRC18-203ENST00000399537 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
TNRC18-203ENST00000399537 PPFIBP1Q86W92 1011 aa17.11■□□□□ 0.33
TNRC18-203ENST00000399537 ANKRD62A6NC57 917 aa17.11■□□□□ 0.33
TNRC18-203ENST00000399537 TXLNBQ8N3L3 684 aa17.1■□□□□ 0.33
TNRC18-203ENST00000399537 RRBP1Q9P2E9 1410 aaKnown RBP17.1■□□□□ 0.33
TNRC18-203ENST00000399537 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
TNRC18-203ENST00000399537 JMYQ8N9B5 988 aa17.1■□□□□ 0.33
TNRC18-203ENST00000399537 ARHGAP5Q13017 1502 aa17.1■□□□□ 0.33
TNRC18-203ENST00000399537 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
TNRC18-203ENST00000399537 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
TNRC18-203ENST00000399537 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 ADAMTS8Q9UP79 889 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
TNRC18-203ENST00000399537 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 SERPINC1P01008 464 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 HECW1Q76N89 1606 aa17.09■□□□□ 0.33
TNRC18-203ENST00000399537 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
TNRC18-203ENST00000399537 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
TNRC18-203ENST00000399537 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
TNRC18-203ENST00000399537 UQCRHP07919 91 aa17.08■□□□□ 0.32
TNRC18-203ENST00000399537 TNMDQ9H2S6 317 aa17.08■□□□□ 0.32
TNRC18-203ENST00000399537 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
TNRC18-203ENST00000399537 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
TNRC18-203ENST00000399537 NEK4P51957 841 aa17.07■□□□□ 0.32
TNRC18-203ENST00000399537 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
TNRC18-203ENST00000399537 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
TNRC18-203ENST00000399537 IQCEQ6IPM2 695 aa17.07■□□□□ 0.32
TNRC18-203ENST00000399537 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■□□ 16.5
TNRC18-203ENST00000399537 CCDC30Q5VVM6 783 aa17.07■□□□□ 0.32
TNRC18-203ENST00000399537 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
TNRC18-203ENST00000399537 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
TNRC18-203ENST00000399537 FAM193AP78312 1265 aa17.06■□□□□ 0.32
TNRC18-203ENST00000399537 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
TNRC18-203ENST00000399537 MCM2P49736 904 aa17.06■□□□□ 0.32
TNRC18-203ENST00000399537 SEPT11Q9NVA2 429 aaKnown RBP17.06■□□□□ 0.32
TNRC18-203ENST00000399537 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
TNRC18-203ENST00000399537 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 GNAI3P08754 354 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 ME1P48163 572 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
TNRC18-203ENST00000399537 DACH1Q9UI36 760 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
TNRC18-203ENST00000399537 TRIM22Q8IYM9 498 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 FAM177BA6PVY3 158 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 GRPEL1Q9HAV7 217 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 TAX1BP1Q86VP1 789 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 MPNDQ8N594 471 aa17.04■□□□□ 0.32
TNRC18-203ENST00000399537 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms