RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
BRCC3-206ENST00000399042 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
BRCC3-206ENST00000399042 MST1RQ04912 1400 aa12.22□□□□□ -0.45
BRCC3-206ENST00000399042 KTN1Q86UP2 1357 aaKnown RBP12.22□□□□□ -0.45
BRCC3-206ENST00000399042 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
BRCC3-206ENST00000399042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
BRCC3-206ENST00000399042 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
BRCC3-206ENST00000399042 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
BRCC3-206ENST00000399042 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
BRCC3-206ENST00000399042 ATP7BP35670 1465 aa12.21□□□□□ -0.46
BRCC3-206ENST00000399042 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
BRCC3-206ENST00000399042 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
BRCC3-206ENST00000399042 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
BRCC3-206ENST00000399042 FMN2Q9NZ56 1722 aa12.18□□□□□ -0.46
BRCC3-206ENST00000399042 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
BRCC3-206ENST00000399042 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
BRCC3-206ENST00000399042 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
BRCC3-206ENST00000399042 ABTB2Q8N961 1025 aa12.17□□□□□ -0.46
BRCC3-206ENST00000399042 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
BRCC3-206ENST00000399042 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
BRCC3-206ENST00000399042 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
BRCC3-206ENST00000399042 POLR3AO14802 1390 aaPredicted RBP12.16□□□□□ -0.46
BRCC3-206ENST00000399042 XIRP1Q702N8 1843 aaKnown RBP12.16□□□□□ -0.46
BRCC3-206ENST00000399042 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
BRCC3-206ENST00000399042 ANP32CO43423 234 aa12.15□□□□□ -0.46
BRCC3-206ENST00000399042 NLRP6P59044 892 aa12.15□□□□□ -0.46
BRCC3-206ENST00000399042 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
BRCC3-206ENST00000399042 LRRC59Q96AG4 307 aaKnown RBP12.15□□□□□ -0.46
BRCC3-206ENST00000399042 COG3Q96JB2 828 aa12.15□□□□□ -0.46
BRCC3-206ENST00000399042 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
BRCC3-206ENST00000399042 SOX12O15370 315 aa12.14□□□□□ -0.47
BRCC3-206ENST00000399042 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
BRCC3-206ENST00000399042 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
BRCC3-206ENST00000399042 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
BRCC3-206ENST00000399042 USP6P35125 1406 aa12.13□□□□□ -0.47
BRCC3-206ENST00000399042 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
BRCC3-206ENST00000399042 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
BRCC3-206ENST00000399042 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
BRCC3-206ENST00000399042 TNNT2P45379 298 aaPredicted RBP12.13□□□□□ -0.47
BRCC3-206ENST00000399042 NLRP13Q86W25 1043 aa12.13□□□□□ -0.47
BRCC3-206ENST00000399042 NME9Q86XW9 330 aa12.13□□□□□ -0.47
BRCC3-206ENST00000399042 ITSN1Q15811 1721 aa12.13□□□□□ -0.47
BRCC3-206ENST00000399042 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
BRCC3-206ENST00000399042 BRD4O60885 1362 aaPredicted RBP12.12□□□□□ -0.47
BRCC3-206ENST00000399042 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
BRCC3-206ENST00000399042 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-206ENST00000399042 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
BRCC3-206ENST00000399042 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
BRCC3-206ENST00000399042 FYB1O15117 783 aa12.1□□□□□ -0.47
BRCC3-206ENST00000399042 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-206ENST00000399042 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-206ENST00000399042 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
BRCC3-206ENST00000399042 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
BRCC3-206ENST00000399042 CD163L1Q9NR16 1453 aa12.09□□□□□ -0.47
BRCC3-206ENST00000399042 HSPA1LP34931 641 aa12.09□□□□□ -0.47
BRCC3-206ENST00000399042 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
BRCC3-206ENST00000399042 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
BRCC3-206ENST00000399042 TOPAZ1Q8N9V7 1692 aa12.08□□□□□ -0.48
BRCC3-206ENST00000399042 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-206ENST00000399042 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-206ENST00000399042 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-206ENST00000399042 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-206ENST00000399042 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-206ENST00000399042 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
BRCC3-206ENST00000399042 NSD2O96028 1365 aa12.07□□□□□ -0.48
BRCC3-206ENST00000399042 RALBP1Q15311 655 aa12.07□□□□□ -0.48
BRCC3-206ENST00000399042 KCNH5Q8NCM2 988 aa12.07□□□□□ -0.48
BRCC3-206ENST00000399042 CABLES1Q8TDN4 633 aa12.07□□□□□ -0.48
BRCC3-206ENST00000399042 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
BRCC3-206ENST00000399042 MYOM1P52179 1685 aa12.06□□□□□ -0.48
BRCC3-206ENST00000399042 ZC3H6P61129 1189 aaKnown RBP12.05□□□□□ -0.48
BRCC3-206ENST00000399042 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
BRCC3-206ENST00000399042 PXDNQ92626 1479 aa12.05□□□□□ -0.48
BRCC3-206ENST00000399042 GCP02774 474 aa12.04□□□□□ -0.48
BRCC3-206ENST00000399042 AMPHP49418 695 aa12.04□□□□□ -0.48
BRCC3-206ENST00000399042 JCADQ9P266 1359 aa12.04□□□□□ -0.48
BRCC3-206ENST00000399042 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
BRCC3-206ENST00000399042 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
BRCC3-206ENST00000399042 PRKRIP1Q9H875 184 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-206ENST00000399042 AHDC1Q5TGY3 1603 aaPredicted RBP12.03□□□□□ -0.48
BRCC3-206ENST00000399042 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
BRCC3-206ENST00000399042 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
BRCC3-206ENST00000399042 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
BRCC3-206ENST00000399042 CFAP53Q96M91 514 aa12.02□□□□□ -0.49
BRCC3-206ENST00000399042 PRDM11Q9NQV5 511 aa12.02□□□□□ -0.49
BRCC3-206ENST00000399042 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
BRCC3-206ENST00000399042 AKAP12Q02952 1782 aa12.02□□□□□ -0.49
BRCC3-206ENST00000399042 FBLN1P23142 703 aa12.01□□□□□ -0.49
BRCC3-206ENST00000399042 PNPLA6Q8IY17 1366 aa12.01□□□□□ -0.49
BRCC3-206ENST00000399042 MON2Q7Z3U7 1717 aa12□□□□□ -0.49
BRCC3-206ENST00000399042 PPP2R1AP30153 589 aa12□□□□□ -0.49
BRCC3-206ENST00000399042 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
BRCC3-206ENST00000399042 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
BRCC3-206ENST00000399042 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 MTHFSP49914 203 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 EVA1CP58658 441 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
BRCC3-206ENST00000399042 LTV1Q96GA3 475 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms