RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
RPRD1A-202ENST00000399022 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
RPRD1A-202ENST00000399022 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
RPRD1A-202ENST00000399022 RRS1Q15050 365 aaKnown RBP17.79■□□□□ 0.44
RPRD1A-202ENST00000399022 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
RPRD1A-202ENST00000399022 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
RPRD1A-202ENST00000399022 PLCH2O75038 1416 aa17.78■□□□□ 0.44
RPRD1A-202ENST00000399022 FKBP5Q13451 457 aaPredicted RBP17.78■□□□□ 0.44
RPRD1A-202ENST00000399022 ATF7IPQ6VMQ6 1270 aa17.78■□□□□ 0.44
RPRD1A-202ENST00000399022 TSPYL4Q9UJ04 414 aa17.78■□□□□ 0.44
RPRD1A-202ENST00000399022 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
RPRD1A-202ENST00000399022 MVPQ14764 893 aaKnown RBP17.78■□□□□ 0.44
RPRD1A-202ENST00000399022 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.44
RPRD1A-202ENST00000399022 PBRM1Q86U86 1689 aa17.77■□□□□ 0.44
RPRD1A-202ENST00000399022 HMGN5P82970 282 aaKnown RBP17.77■□□□□ 0.44
RPRD1A-202ENST00000399022 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.43
RPRD1A-202ENST00000399022 DIAPH3Q9NSV4 1193 aa17.76■□□□□ 0.43
RPRD1A-202ENST00000399022 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
RPRD1A-202ENST00000399022 CIZ1Q9ULV3 898 aaPredicted RBP17.76■□□□□ 0.43
RPRD1A-202ENST00000399022 IGHDP01880 384 aa17.75■□□□□ 0.43
RPRD1A-202ENST00000399022 NLRP6P59044 892 aa17.75■□□□□ 0.43
RPRD1A-202ENST00000399022 FBLN1P23142 703 aa17.75■□□□□ 0.43
RPRD1A-202ENST00000399022 REC8O95072 547 aa17.75■□□□□ 0.43
RPRD1A-202ENST00000399022 K7ELQ4 463 aaPredicted RBP17.75■□□□□ 0.43
RPRD1A-202ENST00000399022 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
RPRD1A-202ENST00000399022 TEFQ10587 303 aa17.74■□□□□ 0.43
RPRD1A-202ENST00000399022 SSH1Q8WYL5 1049 aa17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 C14orf93Q9H972 538 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 NUP160Q12769 1436 aa17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 TMEM57Q8N5G2 664 aa17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 NKTRP30414 1462 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-202ENST00000399022 CDC45O75419 566 aa17.72■□□□□ 0.43
RPRD1A-202ENST00000399022 TBC1D32Q96NH3 1257 aa17.72■□□□□ 0.43
RPRD1A-202ENST00000399022 RTEL1-TNFRSF6BF6WH68 1400 aa17.72■□□□□ 0.43
RPRD1A-202ENST00000399022 CBX1P83916 185 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 ATAD2Q6PL18 1390 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 MBD3O95983 291 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
RPRD1A-202ENST00000399022 CARD14Q9BXL6 1004 aa17.71■□□□□ 0.42
RPRD1A-202ENST00000399022 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
RPRD1A-202ENST00000399022 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
RPRD1A-202ENST00000399022 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
RPRD1A-202ENST00000399022 INTS3Q68E01 1043 aaKnown RBP17.7■□□□□ 0.42
RPRD1A-202ENST00000399022 TSPY26PQ9H489 355 aa17.7■□□□□ 0.42
RPRD1A-202ENST00000399022 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
RPRD1A-202ENST00000399022 CCDC9Q9Y3X0 531 aaKnown RBP17.69■□□□□ 0.42
RPRD1A-202ENST00000399022 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
RPRD1A-202ENST00000399022 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
RPRD1A-202ENST00000399022 SEC24BO95487 1268 aa17.69■□□□□ 0.42
RPRD1A-202ENST00000399022 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
RPRD1A-202ENST00000399022 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
RPRD1A-202ENST00000399022 A2MP01023 1474 aa17.68■□□□□ 0.42
RPRD1A-202ENST00000399022 PSME1Q06323 249 aa17.68■□□□□ 0.42
RPRD1A-202ENST00000399022 NME9Q86XW9 330 aa17.68■□□□□ 0.42
RPRD1A-202ENST00000399022 FCHSD2O94868 740 aa17.68■□□□□ 0.42
RPRD1A-202ENST00000399022 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
RPRD1A-202ENST00000399022 UHRF1BP1Q6BDS2 1440 aa17.68■□□□□ 0.42
RPRD1A-202ENST00000399022 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 SSFA2P28290 1259 aa17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 MAPK8IP2Q13387 824 aaPredicted RBP17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 RABEP1Q15276 862 aa17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
RPRD1A-202ENST00000399022 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 GCC2Q8IWJ2 1684 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 SYCE3A1L190 88 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
RPRD1A-202ENST00000399022 GOLGA6L19H0YKK7 550 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 NEK4P51957 841 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 SASS6Q6UVJ0 657 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 NINLQ9Y2I6 1382 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 ABTB2Q8N961 1025 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 C9orf78Q9NZ63 289 aaPredicted RBP17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
RPRD1A-202ENST00000399022 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
RPRD1A-202ENST00000399022 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
RPRD1A-202ENST00000399022 BECN2A8MW95 431 aa17.63■□□□□ 0.41
RPRD1A-202ENST00000399022 TRIM27P14373 513 aa17.63■□□□□ 0.41
RPRD1A-202ENST00000399022 GPATCH3Q96I76 525 aa17.63■□□□□ 0.41
RPRD1A-202ENST00000399022 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
RPRD1A-202ENST00000399022 CCDC66A2RUB6 948 aa17.63■□□□□ 0.41
RPRD1A-202ENST00000399022 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
RPRD1A-202ENST00000399022 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
RPRD1A-202ENST00000399022 PDCL2Q8N4E4 241 aa17.62■□□□□ 0.41
RPRD1A-202ENST00000399022 ZNF428Q96B54 188 aa17.62■□□□□ 0.41
RPRD1A-202ENST00000399022 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
RPRD1A-202ENST00000399022 MCM10Q7L590 875 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms