RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 MPNDQ8N594 471 aa12.89□□□□□ -0.35
SCMH1-209ENST00000397174 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
SCMH1-209ENST00000397174 HDAC1Q13547 482 aaPredicted RBP12.88□□□□□ -0.35
SCMH1-209ENST00000397174 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
SCMH1-209ENST00000397174 PKP1Q13835 747 aa12.88□□□□□ -0.35
SCMH1-209ENST00000397174 FTSJ3Q8IY81 847 aaKnown RBP12.88□□□□□ -0.35
SCMH1-209ENST00000397174 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
SCMH1-209ENST00000397174 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
SCMH1-209ENST00000397174 TMEM63CQ9P1W3 806 aa12.87□□□□□ -0.35
SCMH1-209ENST00000397174 U2AF2P26368 475 aaKnown RBP eCLIP12.87□□□□□ -0.357e-9■■□□□ 12.3
SCMH1-209ENST00000397174 ZNF771Q7L3S4 317 aaPredicted RBP12.87□□□□□ -0.35
SCMH1-209ENST00000397174 C17orf53Q8N3J3 647 aaPredicted RBP12.87□□□□□ -0.35
SCMH1-209ENST00000397174 GRIN2AQ12879 1464 aa12.87□□□□□ -0.35
SCMH1-209ENST00000397174 KIF16BQ96L93 1317 aa12.86□□□□□ -0.35
SCMH1-209ENST00000397174 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
SCMH1-209ENST00000397174 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
SCMH1-209ENST00000397174 CDK11BP21127 795 aaKnown RBP12.86□□□□□ -0.35
SCMH1-209ENST00000397174 NOLC1Q14978 699 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCMH1-209ENST00000397174 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
SCMH1-209ENST00000397174 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
SCMH1-209ENST00000397174 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
SCMH1-209ENST00000397174 PTPRGP23470 1445 aa12.85□□□□□ -0.35
SCMH1-209ENST00000397174 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
SCMH1-209ENST00000397174 NUCB2P80303 420 aa12.85□□□□□ -0.35
SCMH1-209ENST00000397174 PIBF1Q8WXW3 757 aa12.85□□□□□ -0.35
SCMH1-209ENST00000397174 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
SCMH1-209ENST00000397174 SYNMO15061 1565 aa12.84□□□□□ -0.35
SCMH1-209ENST00000397174 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
SCMH1-209ENST00000397174 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
SCMH1-209ENST00000397174 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
SCMH1-209ENST00000397174 ITPRIPQ8IWB1 547 aa12.84□□□□□ -0.35
SCMH1-209ENST00000397174 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
SCMH1-209ENST00000397174 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SCMH1-209ENST00000397174 NUCB1Q02818 461 aa12.83□□□□□ -0.36
SCMH1-209ENST00000397174 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
SCMH1-209ENST00000397174 TBC1D9Q6ZT07 1266 aa12.82□□□□□ -0.36
SCMH1-209ENST00000397174 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
SCMH1-209ENST00000397174 EIF2AK4Q9P2K8 1649 aaKnown RBP12.82□□□□□ -0.36
SCMH1-209ENST00000397174 PLEKHD1A6NEE1 506 aa12.81□□□□□ -0.36
SCMH1-209ENST00000397174 BMP2KLQ5H9B9 411 aa12.81□□□□□ -0.36
SCMH1-209ENST00000397174 TTC12Q9H892 705 aaPredicted RBP12.81□□□□□ -0.36
SCMH1-209ENST00000397174 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■□□□ 13.9
SCMH1-209ENST00000397174 FKBP5Q13451 457 aaPredicted RBP12.81□□□□□ -0.36
SCMH1-209ENST00000397174 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
SCMH1-209ENST00000397174 TRIM27P14373 513 aa12.8□□□□□ -0.36
SCMH1-209ENST00000397174 KCNJ4P48050 445 aa12.8□□□□□ -0.36
SCMH1-209ENST00000397174 CHD1LQ86WJ1 897 aa12.8□□□□□ -0.36
SCMH1-209ENST00000397174 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
SCMH1-209ENST00000397174 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
SCMH1-209ENST00000397174 TSPY26PQ9H489 355 aa12.8□□□□□ -0.36
SCMH1-209ENST00000397174 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 ZDHHC9Q9Y397 364 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
SCMH1-209ENST00000397174 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
SCMH1-209ENST00000397174 PLA2R1Q13018 1463 aa12.79□□□□□ -0.36
SCMH1-209ENST00000397174 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
SCMH1-209ENST00000397174 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
SCMH1-209ENST00000397174 SPTLC3Q9NUV7 552 aa12.78□□□□□ -0.36
SCMH1-209ENST00000397174 MYOM1P52179 1685 aa12.78□□□□□ -0.36
SCMH1-209ENST00000397174 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
SCMH1-209ENST00000397174 NUP160Q12769 1436 aa12.78□□□□□ -0.36
SCMH1-209ENST00000397174 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
SCMH1-209ENST00000397174 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
SCMH1-209ENST00000397174 RAPGEF6Q8TEU7 1601 aa12.78□□□□□ -0.36
SCMH1-209ENST00000397174 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
SCMH1-209ENST00000397174 CDCA8Q53HL2 280 aa12.77□□□□□ -0.36
SCMH1-209ENST00000397174 OGFRQ9NZT2 677 aa12.77□□□□□ -0.36
SCMH1-209ENST00000397174 RABEP1Q15276 862 aa12.77□□□□□ -0.37
SCMH1-209ENST00000397174 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.37
SCMH1-209ENST00000397174 FEZ1Q99689 392 aa12.77□□□□□ -0.37
SCMH1-209ENST00000397174 USP25Q9UHP3 1055 aa12.76□□□□□ -0.37
SCMH1-209ENST00000397174 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
SCMH1-209ENST00000397174 ZBTB40Q9NUA8 1239 aa12.76□□□□□ -0.37
SCMH1-209ENST00000397174 POLR3AO14802 1390 aaPredicted RBP12.76□□□□□ -0.37
SCMH1-209ENST00000397174 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
SCMH1-209ENST00000397174 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
SCMH1-209ENST00000397174 TSR2Q969E8 191 aaKnown RBP12.75□□□□□ -0.37
SCMH1-209ENST00000397174 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 MBD3O95983 291 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 SLFN14P0C7P3 912 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 ATF7IPQ6VMQ6 1270 aa12.75□□□□□ -0.37
SCMH1-209ENST00000397174 CWC22Q9HCG8 908 aaKnown RBP12.75□□□□□ -0.37
SCMH1-209ENST00000397174 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 KANK1Q14678 1352 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 CARD14Q9BXL6 1004 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
SCMH1-209ENST00000397174 SHPRHQ149N8 1683 aa12.74□□□□□ -0.37
SCMH1-209ENST00000397174 CTIFO43310 598 aaKnown RBP12.73□□□□□ -0.37
SCMH1-209ENST00000397174 ADCY5O95622 1261 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms