RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 ARHGEF10O15013 1369 aa29.36■■■□□ 2.29
FXN-202ENST00000396364 TNS3Q68CZ2 1445 aa29.36■■■□□ 2.29
FXN-202ENST00000396364 EDC4Q6P2E9 1401 aaKnown RBP29.36■■■□□ 2.29
FXN-202ENST00000396364 TTC21AQ8NDW8 1320 aa29.35■■■□□ 2.29
FXN-202ENST00000396364 ZNF316A6NFI3 1004 aaPredicted RBP29.34■■■□□ 2.29
FXN-202ENST00000396364 SPATA31A3Q5VYP0 1347 aa29.34■■■□□ 2.29
FXN-202ENST00000396364 LMOD2Q6P5Q4 547 aa29.33■■■□□ 2.29
FXN-202ENST00000396364 JCADQ9P266 1359 aa29.33■■■□□ 2.29
FXN-202ENST00000396364 NRKQ7Z2Y5 1582 aa29.31■■■□□ 2.28
FXN-202ENST00000396364 TTC21BQ7Z4L5 1316 aa29.3■■■□□ 2.28
FXN-202ENST00000396364 PANK3Q9H999 370 aa29.3■■■□□ 2.28
FXN-202ENST00000396364 SHPRHQ149N8 1683 aa29.29■■■□□ 2.28
FXN-202ENST00000396364 ALS2Q96Q42 1657 aa29.29■■■□□ 2.28
FXN-202ENST00000396364 ABTB2Q8N961 1025 aa29.29■■■□□ 2.28
FXN-202ENST00000396364 SSH2Q76I76 1423 aa29.28■■■□□ 2.28
FXN-202ENST00000396364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.26■■■□□ 2.27
FXN-202ENST00000396364 NSD3Q9BZ95 1437 aa29.26■■■□□ 2.27
FXN-202ENST00000396364 NLRP13Q86W25 1043 aa29.25■■■□□ 2.27
FXN-202ENST00000396364 PNPLA6Q8IY17 1366 aa29.25■■■□□ 2.27
FXN-202ENST00000396364 COL22A1Q8NFW1 1626 aaPredicted RBP29.24■■■□□ 2.27
FXN-202ENST00000396364 ILDR1Q86SU0 546 aaPredicted RBP29.24■■■□□ 2.27
FXN-202ENST00000396364 KNSTRNQ9Y448 316 aa29.24■■■□□ 2.27
FXN-202ENST00000396364 CGNL1Q0VF96 1302 aa29.23■■■□□ 2.27
FXN-202ENST00000396364 SPATA31A6Q5VVP1 1343 aa29.22■■■□□ 2.27
FXN-202ENST00000396364 NLRP6P59044 892 aa29.21■■■□□ 2.27
FXN-202ENST00000396364 KIF20BQ96Q89 1820 aa29.2■■■□□ 2.27
FXN-202ENST00000396364 HAP1P54257 671 aaPredicted RBP29.2■■■□□ 2.26
FXN-202ENST00000396364 CARD14Q9BXL6 1004 aa29.2■■■□□ 2.26
FXN-202ENST00000396364 PIK3C2AO00443 1686 aa29.2■■■□□ 2.26
FXN-202ENST00000396364 MED1Q15648 1581 aaPredicted RBP29.18■■■□□ 2.26
FXN-202ENST00000396364 USP31Q70CQ4 1352 aa29.16■■■□□ 2.26
FXN-202ENST00000396364 COG3Q96JB2 828 aa29.16■■■□□ 2.26
FXN-202ENST00000396364 USP54Q70EL1 1684 aa29.15■■■□□ 2.26
FXN-202ENST00000396364 NSD2O96028 1365 aa29.15■■■□□ 2.26
FXN-202ENST00000396364 NUTM2GQ5VZR2 741 aa29.15■■■□□ 2.26
FXN-202ENST00000396364 NME9Q86XW9 330 aa29.15■■■□□ 2.26
FXN-202ENST00000396364 DDX10Q13206 875 aaKnown RBP29.13■■■□□ 2.25
FXN-202ENST00000396364 KCNH5Q8NCM2 988 aa29.13■■■□□ 2.25
FXN-202ENST00000396364 FYB1O15117 783 aa29.12■■■□□ 2.25
FXN-202ENST00000396364 USP19O94966 1318 aa29.11■■■□□ 2.25
FXN-202ENST00000396364 PHRF1Q9P1Y6 1649 aaKnown RBP29.1■■■□□ 2.25
FXN-202ENST00000396364 NUTM2BA6NNL0 878 aaPredicted RBP29.1■■■□□ 2.25
FXN-202ENST00000396364 NUTM2EB1AL46 878 aaPredicted RBP29.1■■■□□ 2.25
FXN-202ENST00000396364 PLEKHG5O94827 1062 aa29.1■■■□□ 2.25
FXN-202ENST00000396364 NUTM2AQ8IVF1 878 aaPredicted RBP29.1■■■□□ 2.25
FXN-202ENST00000396364 ABCA3Q99758 1704 aa29.1■■■□□ 2.25
FXN-202ENST00000396364 ANKRD26Q9UPS8 1709 aa29.09■■■□□ 2.25
FXN-202ENST00000396364 PER1O15534 1290 aaPredicted RBP29.09■■■□□ 2.25
FXN-202ENST00000396364 GGNBP2Q9H3C7 697 aa29.09■■■□□ 2.25
FXN-202ENST00000396364 OVOS2A0A0J9YW53 1432 aa29.09■■■□□ 2.25
FXN-202ENST00000396364 OVOS2Q6IE36 1432 aa29.09■■■□□ 2.25
FXN-202ENST00000396364 CRYBG1Q9Y4K1 1723 aa29.08■■■□□ 2.25
FXN-202ENST00000396364 SLIT3O75094 1523 aa29.08■■■□□ 2.25
FXN-202ENST00000396364 CABLES1Q8TDN4 633 aa29.07■■■□□ 2.24
FXN-202ENST00000396364 NPC1L1Q9UHC9 1359 aa29.06■■■□□ 2.24
FXN-202ENST00000396364 GCP02774 474 aa29.05■■■□□ 2.24
FXN-202ENST00000396364 MEX3CQ5U5Q3 659 aaKnown RBP29.05■■■□□ 2.24
FXN-202ENST00000396364 MARF1Q9Y4F3 1742 aaKnown RBP29.05■■■□□ 2.24
FXN-202ENST00000396364 AMER1Q5JTC6 1135 aaPredicted RBP29.03■■■□□ 2.24
FXN-202ENST00000396364 ZRANB1Q9UGI0 708 aa29.03■■■□□ 2.24
FXN-202ENST00000396364 MORC1Q86VD1 984 aa29.01■■■□□ 2.23
FXN-202ENST00000396364 ADAMTS2O95450 1211 aa29■■■□□ 2.23
FXN-202ENST00000396364 SOX12O15370 315 aa28.99■■■□□ 2.23
FXN-202ENST00000396364 CC2D1BQ5T0F9 858 aaKnown RBP28.98■■■□□ 2.23
FXN-202ENST00000396364 CPDO75976 1380 aa28.98■■■□□ 2.23
FXN-202ENST00000396364 PRDM11Q9NQV5 511 aa28.97■■■□□ 2.23
FXN-202ENST00000396364 LRP6O75581 1613 aa28.97■■■□□ 2.23
FXN-202ENST00000396364 NFAT5O94916 1531 aa28.96■■■□□ 2.23
FXN-202ENST00000396364 ZC3H6P61129 1189 aaKnown RBP28.96■■■□□ 2.23
FXN-202ENST00000396364 COL14A1Q05707 1796 aaKnown RBP28.94■■■□□ 2.22
FXN-202ENST00000396364 KIAA0232Q92628 1395 aa28.94■■■□□ 2.22
FXN-202ENST00000396364 NGLY1Q96IV0 654 aa28.93■■■□□ 2.22
FXN-202ENST00000396364 LTN1O94822 1766 aa28.93■■■□□ 2.22
FXN-202ENST00000396364 AATKQ6ZMQ8 1374 aa28.92■■■□□ 2.22
FXN-202ENST00000396364 ZBTB7CA1YPR0 619 aa28.92■■■□□ 2.22
FXN-202ENST00000396364 C8orf37Q96NL8 207 aa28.92■■■□□ 2.22
FXN-202ENST00000396364 ABCC6O95255 1503 aa28.91■■■□□ 2.22
FXN-202ENST00000396364 CNGB1Q14028 1251 aaPredicted RBP28.91■■■□□ 2.22
FXN-202ENST00000396364 ARHGEF25Q86VW2 580 aa28.91■■■□□ 2.22
FXN-202ENST00000396364 TNNT2P45379 298 aaPredicted RBP28.89■■■□□ 2.22
FXN-202ENST00000396364 KIF24Q5T7B8 1368 aa28.88■■■□□ 2.21
FXN-202ENST00000396364 NWD2Q9ULI1 1742 aa28.87■■■□□ 2.21
FXN-202ENST00000396364 AMPHP49418 695 aa28.87■■■□□ 2.21
FXN-202ENST00000396364 MAP2P11137 1827 aaKnown RBP28.87■■■□□ 2.21
FXN-202ENST00000396364 RTL1A6NKG5 1358 aa28.87■■■□□ 2.21
FXN-202ENST00000396364 PLCH1Q4KWH8 1693 aa28.86■■■□□ 2.21
FXN-202ENST00000396364 FAM83GA6ND36 823 aa28.86■■■□□ 2.21
FXN-202ENST00000396364 RALBP1Q15311 655 aa28.85■■■□□ 2.21
FXN-202ENST00000396364 PHF23Q9BUL5 403 aaPredicted RBP28.85■■■□□ 2.21
FXN-202ENST00000396364 MAP3K19Q56UN5 1328 aa28.85■■■□□ 2.21
FXN-202ENST00000396364 CHRNA2Q15822 529 aa28.84■■■□□ 2.21
FXN-202ENST00000396364 RRS1Q15050 365 aaKnown RBP28.83■■■□□ 2.21
FXN-202ENST00000396364 FNBP4Q8N3X1 1017 aaPredicted RBP28.82■■■□□ 2.2
FXN-202ENST00000396364 BTG4Q9NY30 223 aa28.82■■■□□ 2.2
FXN-202ENST00000396364 BLMP54132 1417 aaPredicted RBP28.82■■■□□ 2.2
FXN-202ENST00000396364 SLIT2O94813 1529 aa28.81■■■□□ 2.2
FXN-202ENST00000396364 FLT4P35916 1363 aa28.81■■■□□ 2.2
FXN-202ENST00000396364 PARD3Q8TEW0 1356 aa28.81■■■□□ 2.2
FXN-202ENST00000396364 AFF2P51816 1311 aa28.81■■■□□ 2.2
FXN-202ENST00000396364 LMO7Q8WWI1 1683 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms