RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
DDX39B-202ENST00000396172 MARF1Q9Y4F3 1742 aaKnown RBP13.49□□□□□ -0.25
DDX39B-202ENST00000396172 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
DDX39B-202ENST00000396172 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-202ENST00000396172 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
DDX39B-202ENST00000396172 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
DDX39B-202ENST00000396172 PXDNQ92626 1479 aa13.48□□□□□ -0.25
DDX39B-202ENST00000396172 PSME1Q06323 249 aa13.48□□□□□ -0.25
DDX39B-202ENST00000396172 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
DDX39B-202ENST00000396172 ANP32CO43423 234 aa13.46□□□□□ -0.25
DDX39B-202ENST00000396172 CARD14Q9BXL6 1004 aa13.46□□□□□ -0.25
DDX39B-202ENST00000396172 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
DDX39B-202ENST00000396172 ABCA3Q99758 1704 aa13.46□□□□□ -0.26
DDX39B-202ENST00000396172 CRYBG1Q9Y4K1 1723 aa13.46□□□□□ -0.26
DDX39B-202ENST00000396172 PHRF1Q9P1Y6 1649 aaKnown RBP13.45□□□□□ -0.26
DDX39B-202ENST00000396172 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-202ENST00000396172 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
DDX39B-202ENST00000396172 TTC21BQ7Z4L5 1316 aa13.45□□□□□ -0.26
DDX39B-202ENST00000396172 LTN1O94822 1766 aa13.45□□□□□ -0.26
DDX39B-202ENST00000396172 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
DDX39B-202ENST00000396172 FOXO3O43524 673 aa13.45□□□□□ -0.26
DDX39B-202ENST00000396172 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-202ENST00000396172 COL16A1Q07092 1604 aaPredicted RBP13.45□□□□□ -0.26
DDX39B-202ENST00000396172 MYT1Q01538 1121 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 RALBP1Q15311 655 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 OVOS2A0A0J9YW53 1432 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 OVOS2Q6IE36 1432 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 COL22A1Q8NFW1 1626 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-202ENST00000396172 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 PARD3Q8TEW0 1356 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 SHPRHQ149N8 1683 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
DDX39B-202ENST00000396172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX39B-202ENST00000396172 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-202ENST00000396172 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-202ENST00000396172 COG3Q96JB2 828 aa13.41□□□□□ -0.26
DDX39B-202ENST00000396172 SLIT3O75094 1523 aa13.41□□□□□ -0.26
DDX39B-202ENST00000396172 FYB1O15117 783 aa13.4□□□□□ -0.26
DDX39B-202ENST00000396172 PRKRIP1Q9H875 184 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-202ENST00000396172 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
DDX39B-202ENST00000396172 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
DDX39B-202ENST00000396172 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
DDX39B-202ENST00000396172 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-202ENST00000396172 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
DDX39B-202ENST00000396172 NME9Q86XW9 330 aa13.39□□□□□ -0.27
DDX39B-202ENST00000396172 GTF3C3Q9Y5Q9 886 aa13.39□□□□□ -0.27
DDX39B-202ENST00000396172 SPATA31A3Q5VYP0 1347 aa13.38□□□□□ -0.27
DDX39B-202ENST00000396172 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
DDX39B-202ENST00000396172 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
DDX39B-202ENST00000396172 MYBBP1AQ9BQG0 1328 aaKnown RBP13.38□□□□□ -0.27
DDX39B-202ENST00000396172 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-202ENST00000396172 AATKQ6ZMQ8 1374 aa13.36□□□□□ -0.27
DDX39B-202ENST00000396172 NFAT5O94916 1531 aa13.36□□□□□ -0.27
DDX39B-202ENST00000396172 ABCC6O95255 1503 aa13.36□□□□□ -0.27
DDX39B-202ENST00000396172 NLRP6P59044 892 aa13.36□□□□□ -0.27
DDX39B-202ENST00000396172 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
DDX39B-202ENST00000396172 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
DDX39B-202ENST00000396172 USP19O94966 1318 aa13.35□□□□□ -0.27
DDX39B-202ENST00000396172 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
DDX39B-202ENST00000396172 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
DDX39B-202ENST00000396172 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
DDX39B-202ENST00000396172 CNGB1Q14028 1251 aaPredicted RBP13.34□□□□□ -0.27
DDX39B-202ENST00000396172 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
DDX39B-202ENST00000396172 CDK12Q9NYV4 1490 aaPredicted RBP13.33□□□□□ -0.27
DDX39B-202ENST00000396172 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.28
DDX39B-202ENST00000396172 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
DDX39B-202ENST00000396172 CCER2I3L3R5 266 aa13.33□□□□□ -0.28
DDX39B-202ENST00000396172 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
DDX39B-202ENST00000396172 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
DDX39B-202ENST00000396172 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
DDX39B-202ENST00000396172 PNPLA6Q8IY17 1366 aa13.31□□□□□ -0.28
DDX39B-202ENST00000396172 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
DDX39B-202ENST00000396172 NUTM2GQ5VZR2 741 aa13.31□□□□□ -0.28
DDX39B-202ENST00000396172 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
DDX39B-202ENST00000396172 JCADQ9P266 1359 aa13.3□□□□□ -0.28
DDX39B-202ENST00000396172 TNNT2P45379 298 aaPredicted RBP13.3□□□□□ -0.28
DDX39B-202ENST00000396172 MIER1Q8N108 512 aa13.3□□□□□ -0.28
DDX39B-202ENST00000396172 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
DDX39B-202ENST00000396172 COL18A1P39060 1754 aa13.3□□□□□ -0.28
DDX39B-202ENST00000396172 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
DDX39B-202ENST00000396172 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
DDX39B-202ENST00000396172 NWD2Q9ULI1 1742 aa13.29□□□□□ -0.28
DDX39B-202ENST00000396172 FLT4P35916 1363 aa13.29□□□□□ -0.28
DDX39B-202ENST00000396172 CPDO75976 1380 aa13.28□□□□□ -0.28
DDX39B-202ENST00000396172 GCP02774 474 aa13.28□□□□□ -0.28
DDX39B-202ENST00000396172 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
DDX39B-202ENST00000396172 COL3A1P02461 1466 aaPredicted RBP13.27□□□□□ -0.29
DDX39B-202ENST00000396172 BLMP54132 1417 aaPredicted RBP13.27□□□□□ -0.29
DDX39B-202ENST00000396172 INSRP06213 1382 aa13.26□□□□□ -0.29
DDX39B-202ENST00000396172 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
DDX39B-202ENST00000396172 SOX12O15370 315 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 MTHFSP49914 203 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 MRS2Q9HD23 443 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 MAP3K19Q56UN5 1328 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 AMPHP49418 695 aa13.25□□□□□ -0.29
DDX39B-202ENST00000396172 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms