RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 PTMSP20962 102 aa22.63■■□□□ 1.21
HERPUD2-202ENST00000396081 ZSCAN30Q86W11 494 aa22.63■■□□□ 1.21
HERPUD2-202ENST00000396081 ZNF518AQ6AHZ1 1483 aa22.63■■□□□ 1.21
HERPUD2-202ENST00000396081 RIPK4P57078 832 aa22.63■■□□□ 1.21
HERPUD2-202ENST00000396081 KIF2CQ99661 725 aa22.62■■□□□ 1.21
HERPUD2-202ENST00000396081 NUTM2DQ5VT03 806 aaPredicted RBP22.61■■□□□ 1.21
HERPUD2-202ENST00000396081 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
HERPUD2-202ENST00000396081 PLCH2O75038 1416 aa22.61■■□□□ 1.21
HERPUD2-202ENST00000396081 TBC1D9Q6ZT07 1266 aa22.61■■□□□ 1.21
HERPUD2-202ENST00000396081 BMP2KLQ5H9B9 411 aa22.61■■□□□ 1.21
HERPUD2-202ENST00000396081 MCTP1Q6DN14 999 aa22.6■■□□□ 1.21
HERPUD2-202ENST00000396081 GGNBP2Q9H3C7 697 aa22.6■■□□□ 1.21
HERPUD2-202ENST00000396081 KIF16BQ96L93 1317 aa22.59■■□□□ 1.21
HERPUD2-202ENST00000396081 CABP2Q9NPB3 220 aa22.59■■□□□ 1.21
HERPUD2-202ENST00000396081 BAG4O95429 457 aaKnown RBP22.59■■□□□ 1.21
HERPUD2-202ENST00000396081 CAVIN1Q6NZI2 390 aaKnown RBP22.59■■□□□ 1.21
HERPUD2-202ENST00000396081 PDCL3Q9H2J4 239 aa22.59■■□□□ 1.21
HERPUD2-202ENST00000396081 R3HCC1Q9Y3T6 440 aaKnown RBP22.58■■□□□ 1.2
HERPUD2-202ENST00000396081 NOS1P29475 1434 aa22.57■■□□□ 1.2
HERPUD2-202ENST00000396081 ABCA6Q8N139 1617 aa22.57■■□□□ 1.2
HERPUD2-202ENST00000396081 ARID3AQ99856 593 aa22.57■■□□□ 1.2
HERPUD2-202ENST00000396081 CALD1Q05682 793 aaKnown RBP22.56■■□□□ 1.2
HERPUD2-202ENST00000396081 FAM13BQ9NYF5 915 aa22.56■■□□□ 1.2
HERPUD2-202ENST00000396081 PPP1R9BQ96SB3 815 aa22.56■■□□□ 1.2
HERPUD2-202ENST00000396081 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
HERPUD2-202ENST00000396081 KLHL40Q2TBA0 621 aa22.56■■□□□ 1.2
HERPUD2-202ENST00000396081 SBNO2Q9Y2G9 1366 aa22.55■■□□□ 1.2
HERPUD2-202ENST00000396081 MAP3K4Q9Y6R4 1608 aa22.55■■□□□ 1.2
HERPUD2-202ENST00000396081 OFD1O75665 1012 aa22.54■■□□□ 1.2
HERPUD2-202ENST00000396081 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.54■■□□□ 1.2
HERPUD2-202ENST00000396081 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
HERPUD2-202ENST00000396081 PLEKHF1Q96S99 279 aa22.53■■□□□ 1.2
HERPUD2-202ENST00000396081 EVC2Q86UK5 1308 aa22.51■■□□□ 1.19
HERPUD2-202ENST00000396081 XPCQ01831 940 aaPredicted RBP22.51■■□□□ 1.19
HERPUD2-202ENST00000396081 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
HERPUD2-202ENST00000396081 KIAA1210Q9ULL0 1709 aa22.5■■□□□ 1.19
HERPUD2-202ENST00000396081 SRPK2P78362 688 aaKnown RBP22.5■■□□□ 1.19
HERPUD2-202ENST00000396081 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
HERPUD2-202ENST00000396081 MYOM2P54296 1465 aa22.5■■□□□ 1.19
HERPUD2-202ENST00000396081 ABCC1P33527 1531 aa22.49■■□□□ 1.19
HERPUD2-202ENST00000396081 CDC45O75419 566 aa22.49■■□□□ 1.19
HERPUD2-202ENST00000396081 C14orf93Q9H972 538 aaKnown RBP22.49■■□□□ 1.19
HERPUD2-202ENST00000396081 AK9Q5TCS8 1911 aa22.49■■□□□ 1.19
HERPUD2-202ENST00000396081 PKP1Q13835 747 aa22.49■■□□□ 1.19
HERPUD2-202ENST00000396081 ZSCAN23Q3MJ62 389 aa22.49■■□□□ 1.19
HERPUD2-202ENST00000396081 STK26Q9P289 416 aa22.48■■□□□ 1.19
HERPUD2-202ENST00000396081 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
HERPUD2-202ENST00000396081 FOXD4L5Q5VV16 416 aaPredicted RBP22.48■■□□□ 1.19
HERPUD2-202ENST00000396081 FOXD4L4Q8WXT5 416 aaPredicted RBP22.48■■□□□ 1.19
HERPUD2-202ENST00000396081 THUMPD2Q9BTF0 503 aaKnown RBP22.48■■□□□ 1.19
HERPUD2-202ENST00000396081 RBSNQ9H1K0 784 aa22.48■■□□□ 1.19
HERPUD2-202ENST00000396081 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
HERPUD2-202ENST00000396081 ZBTB7BO15156 539 aaPredicted RBP22.47■■□□□ 1.19
HERPUD2-202ENST00000396081 PRPF40AO75400 957 aaKnown RBP22.47■■□□□ 1.19
HERPUD2-202ENST00000396081 RBM27Q9P2N5 1060 aaKnown RBP22.47■■□□□ 1.19
HERPUD2-202ENST00000396081 PPIP5K1Q6PFW1 1433 aa22.46■■□□□ 1.19
HERPUD2-202ENST00000396081 TET3O43151 1660 aa22.46■■□□□ 1.19
HERPUD2-202ENST00000396081 DIAPH1O60610 1272 aaKnown RBP22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 PRIM1P49642 420 aaKnown RBP22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 ANKRD36BQ8N2N9 1353 aa22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 APBB1O00213 710 aa22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 NUCB2P80303 420 aa22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 IL16Q14005 1332 aa22.45■■□□□ 1.18
HERPUD2-202ENST00000396081 CHAMP1Q96JM3 812 aa22.44■■□□□ 1.18
HERPUD2-202ENST00000396081 RABEP1Q15276 862 aa22.44■■□□□ 1.18
HERPUD2-202ENST00000396081 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
HERPUD2-202ENST00000396081 SHROOM2Q13796 1616 aa22.43■■□□□ 1.18
HERPUD2-202ENST00000396081 ZNF445P59923 1031 aa22.43■■□□□ 1.18
HERPUD2-202ENST00000396081 GGT6Q6P531 493 aa22.43■■□□□ 1.18
HERPUD2-202ENST00000396081 LMBRD1Q9NUN5 540 aa22.43■■□□□ 1.18
HERPUD2-202ENST00000396081 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
HERPUD2-202ENST00000396081 UQCRHLA0A096LP55 91 aa22.42■■□□□ 1.18
HERPUD2-202ENST00000396081 UQCRHP07919 91 aa22.42■■□□□ 1.18
HERPUD2-202ENST00000396081 TSPYL6Q8N831 410 aa22.42■■□□□ 1.18
HERPUD2-202ENST00000396081 CHMP4BQ9H444 224 aaKnown RBP22.42■■□□□ 1.18
HERPUD2-202ENST00000396081 GSPT1P15170 499 aaKnown RBP22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 PRKAR2BP31323 418 aa22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 ADGRL1O94910 1474 aa22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 CFAP65Q6ZU64 1925 aaKnown RBP22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 FBLN1P23142 703 aa22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 ZGPATQ8N5A5 531 aaKnown RBP22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 RNF214Q8ND24 703 aa22.41■■□□□ 1.18
HERPUD2-202ENST00000396081 NSD2O96028 1365 aa22.4■■□□□ 1.18
HERPUD2-202ENST00000396081 CLEC17AQ6ZS10 378 aa22.4■■□□□ 1.18
HERPUD2-202ENST00000396081 C16orf71Q8IYS4 520 aaPredicted RBP22.4■■□□□ 1.18
HERPUD2-202ENST00000396081 HMOX1P09601 288 aa22.39■■□□□ 1.18
HERPUD2-202ENST00000396081 NOL7Q9UMY1 257 aaKnown RBP22.39■■□□□ 1.18
HERPUD2-202ENST00000396081 IBTKQ9P2D0 1353 aaPredicted RBP22.39■■□□□ 1.18
HERPUD2-202ENST00000396081 ERCC6L2Q5T890 1561 aa22.39■■□□□ 1.18
HERPUD2-202ENST00000396081 KIF1BO60333 1816 aa22.39■■□□□ 1.17
HERPUD2-202ENST00000396081 SYCE3A1L190 88 aa22.38■■□□□ 1.17
HERPUD2-202ENST00000396081 ADGRB2O60241 1585 aa22.38■■□□□ 1.17
HERPUD2-202ENST00000396081 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
HERPUD2-202ENST00000396081 A0A1W2PP64 1363 aa22.38■■□□□ 1.17
HERPUD2-202ENST00000396081 FYB1O15117 783 aa22.37■■□□□ 1.17
HERPUD2-202ENST00000396081 MRPL50Q8N5N7 158 aaKnown RBP22.37■■□□□ 1.17
HERPUD2-202ENST00000396081 QRICH2Q9H0J4 1663 aa22.37■■□□□ 1.17
HERPUD2-202ENST00000396081 VAMP4O75379 141 aa22.37■■□□□ 1.17
HERPUD2-202ENST00000396081 PLEKHM2Q8IWE5 1019 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms