RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PRAM1Q96QH2 718 aa20.82■□□□□ 0.92
UBFD1-201ENST00000395878 NOB1Q9ULX3 412 aaKnown RBP20.82■□□□□ 0.92
UBFD1-201ENST00000395878 SART3Q15020 963 aaKnown RBP20.81■□□□□ 0.92
UBFD1-201ENST00000395878 CCDC43Q96MW1 224 aaKnown RBP20.81■□□□□ 0.92
UBFD1-201ENST00000395878 PNISRQ8TF01 805 aaKnown RBP20.81■□□□□ 0.92
UBFD1-201ENST00000395878 NBPF8Q3BBV2 869 aa20.8■□□□□ 0.92
UBFD1-201ENST00000395878 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
UBFD1-201ENST00000395878 ACBD3Q9H3P7 528 aa20.8■□□□□ 0.92
UBFD1-201ENST00000395878 CCT4P50991 539 aaKnown RBP20.79■□□□□ 0.92
UBFD1-201ENST00000395878 CAVIN1Q6NZI2 390 aaKnown RBP20.79■□□□□ 0.92
UBFD1-201ENST00000395878 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
UBFD1-201ENST00000395878 SLC12A5Q9H2X9 1139 aa20.79■□□□□ 0.92
UBFD1-201ENST00000395878 RNF214Q8ND24 703 aa20.78■□□□□ 0.92
UBFD1-201ENST00000395878 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
UBFD1-201ENST00000395878 BCAR3O75815 825 aa20.78■□□□□ 0.92
UBFD1-201ENST00000395878 TSR2Q969E8 191 aaKnown RBP20.78■□□□□ 0.92
UBFD1-201ENST00000395878 C1orf115Q9H7X2 142 aa20.78■□□□□ 0.92
UBFD1-201ENST00000395878 KINO60870 393 aaKnown RBP20.78■□□□□ 0.92
UBFD1-201ENST00000395878 DNAJC2Q99543 621 aaKnown RBP20.78■□□□□ 0.92
UBFD1-201ENST00000395878 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.92
UBFD1-201ENST00000395878 SLC4A2P04920 1241 aa20.77■□□□□ 0.91
UBFD1-201ENST00000395878 TXNDC2Q86VQ3 553 aa20.77■□□□□ 0.91
UBFD1-201ENST00000395878 TSPY26PQ9H489 355 aa20.77■□□□□ 0.91
UBFD1-201ENST00000395878 ERBINQ96RT1 1412 aa20.76■□□□□ 0.91
UBFD1-201ENST00000395878 CWC22Q9HCG8 908 aaKnown RBP20.76■□□□□ 0.91
UBFD1-201ENST00000395878 AKNAQ7Z591 1439 aa20.76■□□□□ 0.91
UBFD1-201ENST00000395878 FYB1O15117 783 aa20.76■□□□□ 0.91
UBFD1-201ENST00000395878 RUFY1Q96T51 708 aa20.76■□□□□ 0.91
UBFD1-201ENST00000395878 CDR1P51861 262 aa20.76■□□□□ 0.91
UBFD1-201ENST00000395878 PRPF40AO75400 957 aaKnown RBP20.75■□□□□ 0.91
UBFD1-201ENST00000395878 NAP1L1P55209 391 aaKnown RBP20.75■□□□□ 0.91
UBFD1-201ENST00000395878 HDGFL1Q5TGJ6 251 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
UBFD1-201ENST00000395878 TROQ12816 1431 aaPredicted RBP20.75■□□□□ 0.91
UBFD1-201ENST00000395878 TRIM5Q9C035 493 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 ATF7IPQ6VMQ6 1270 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 AK7Q96M32 723 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 ZNF396Q96N95 335 aaPredicted RBP20.75■□□□□ 0.91
UBFD1-201ENST00000395878 CDK19Q9BWU1 502 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 BACH2Q9BYV9 841 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
UBFD1-201ENST00000395878 KIF6Q6ZMV9 814 aa20.74■□□□□ 0.91
UBFD1-201ENST00000395878 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
UBFD1-201ENST00000395878 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
UBFD1-201ENST00000395878 MVPQ14764 893 aaKnown RBP20.74■□□□□ 0.91
UBFD1-201ENST00000395878 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
UBFD1-201ENST00000395878 PDILTQ8N807 584 aa20.73■□□□□ 0.91
UBFD1-201ENST00000395878 LRRCC1Q9C099 1032 aa20.73■□□□□ 0.91
UBFD1-201ENST00000395878 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
UBFD1-201ENST00000395878 R3HCC1Q9Y3T6 440 aaKnown RBP20.73■□□□□ 0.91
UBFD1-201ENST00000395878 MTERF4Q7Z6M4 381 aaKnown RBP20.73■□□□□ 0.91
UBFD1-201ENST00000395878 HSP90B2PQ58FF3 399 aa20.73■□□□□ 0.91
UBFD1-201ENST00000395878 PRXQ9BXM0 1461 aa20.72■□□□□ 0.91
UBFD1-201ENST00000395878 CABP1Q9NZU7 370 aa20.72■□□□□ 0.91
UBFD1-201ENST00000395878 TATP17735 454 aaPredicted RBP20.71■□□□□ 0.91
UBFD1-201ENST00000395878 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 CCDC173Q0VFZ6 552 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 OFD1O75665 1012 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 AEBP1Q8IUX7 1158 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 CCDC158Q5M9N0 1113 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 RPGRIP1LQ68CZ1 1315 aa20.71■□□□□ 0.91
UBFD1-201ENST00000395878 MAP7D2Q96T17 732 aa20.7■□□□□ 0.9
UBFD1-201ENST00000395878 FIBPO43427 364 aa20.7■□□□□ 0.9
UBFD1-201ENST00000395878 SLC3A2P08195 630 aaKnown RBP20.7■□□□□ 0.9
UBFD1-201ENST00000395878 TIAM1Q13009 1591 aa20.7■□□□□ 0.9
UBFD1-201ENST00000395878 EPS15P42566 896 aa20.7■□□□□ 0.9
UBFD1-201ENST00000395878 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
UBFD1-201ENST00000395878 CCP110O43303 1012 aa20.69■□□□□ 0.9
UBFD1-201ENST00000395878 CT47A1Q5JQC4 288 aaPredicted RBP20.69■□□□□ 0.9
UBFD1-201ENST00000395878 K7ELQ4 463 aaPredicted RBP20.69■□□□□ 0.9
UBFD1-201ENST00000395878 STK38Q15208 465 aa20.69■□□□□ 0.9
UBFD1-201ENST00000395878 DAPK1P53355 1430 aa20.69■□□□□ 0.9
UBFD1-201ENST00000395878 FILIP1LQ4L180 1135 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 WDR33Q9C0J8 1336 aaKnown RBP20.68■□□□□ 0.9
UBFD1-201ENST00000395878 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.68■□□□□ 0.9
UBFD1-201ENST00000395878 ATAD2Q6PL18 1390 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 TTC39AQ5SRH9 613 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 ANKRD30BQ9BXX2 1392 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 SMC2O95347 1197 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 CHD1LQ86WJ1 897 aa20.68■□□□□ 0.9
UBFD1-201ENST00000395878 TXLNAP40222 546 aa20.67■□□□□ 0.9
UBFD1-201ENST00000395878 RTEL1-TNFRSF6BF6WH68 1400 aa20.67■□□□□ 0.9
UBFD1-201ENST00000395878 PIP4K2AP48426 406 aaPredicted RBP20.67■□□□□ 0.9
UBFD1-201ENST00000395878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.67■□□□□ 0.9
UBFD1-201ENST00000395878 DHX8Q14562 1220 aaKnown RBP20.66■□□□□ 0.9
UBFD1-201ENST00000395878 PROSER2Q86WR7 435 aaPredicted RBP20.66■□□□□ 0.9
UBFD1-201ENST00000395878 ERCC4Q92889 916 aaPredicted RBP20.66■□□□□ 0.9
UBFD1-201ENST00000395878 SMARCE1Q969G3 411 aa20.66■□□□□ 0.9
UBFD1-201ENST00000395878 RBM42Q9BTD8 480 aaKnown RBP20.66■□□□□ 0.9
UBFD1-201ENST00000395878 CNNM1Q9NRU3 951 aa20.66■□□□□ 0.9
UBFD1-201ENST00000395878 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
UBFD1-201ENST00000395878 ATP2B1P20020 1258 aa20.65■□□□□ 0.9
UBFD1-201ENST00000395878 ZNF530Q6P9A1 599 aaPredicted RBP20.65■□□□□ 0.9
UBFD1-201ENST00000395878 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
UBFD1-201ENST00000395878 GNL3LQ9NVN8 582 aaKnown RBP20.65■□□□□ 0.9
UBFD1-201ENST00000395878 FCHSD2O94868 740 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms