RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TRMT2AQ8IZ69 625 aaKnown RBP15.25■□□□□ 0.03
SLC28A1-203ENST00000394573 KIF16BQ96L93 1317 aa15.25■□□□□ 0.03
SLC28A1-203ENST00000394573 TNNT1P13805 278 aa15.24■□□□□ 0.03
SLC28A1-203ENST00000394573 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
SLC28A1-203ENST00000394573 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
SLC28A1-203ENST00000394573 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
SLC28A1-203ENST00000394573 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
SLC28A1-203ENST00000394573 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
SLC28A1-203ENST00000394573 NEK11Q8NG66 645 aa15.23■□□□□ 0.03
SLC28A1-203ENST00000394573 C16orf45Q96MC5 204 aaPredicted RBP15.23■□□□□ 0.03
SLC28A1-203ENST00000394573 NPHP1O15259 732 aa15.22■□□□□ 0.03
SLC28A1-203ENST00000394573 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
SLC28A1-203ENST00000394573 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
SLC28A1-203ENST00000394573 RASSF4Q9H2L5 321 aa15.22■□□□□ 0.03
SLC28A1-203ENST00000394573 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.03
SLC28A1-203ENST00000394573 KCNF1Q9H3M0 494 aa15.21■□□□□ 0.03
SLC28A1-203ENST00000394573 KIAA1524Q8TCG1 905 aa15.21■□□□□ 0.03
SLC28A1-203ENST00000394573 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
SLC28A1-203ENST00000394573 LCMT1Q9UIC8 334 aa15.21■□□□□ 0.03
SLC28A1-203ENST00000394573 CAMSAP2Q08AD1 1489 aa15.21■□□□□ 0.02
SLC28A1-203ENST00000394573 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 NUCB2P80303 420 aa15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 SART3Q15020 963 aaKnown RBP15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 SYT10Q6XYQ8 523 aa15.2■□□□□ 0.02
SLC28A1-203ENST00000394573 MYCBPQ99417 103 aaPredicted RBP15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 PPP2R1AP30153 589 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 ZNF592Q92610 1267 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 DRC1Q96MC2 740 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 CYP2C19P33261 490 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 ZDHHC9Q9Y397 364 aa15.19■□□□□ 0.02
SLC28A1-203ENST00000394573 ZMYM3Q14202 1370 aa15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 AXDND1Q5T1B0 1012 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 ZNF446Q9NWS9 450 aa15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 ICE2Q659A1 982 aa15.18■□□□□ 0.02
SLC28A1-203ENST00000394573 IGF1RP08069 1367 aa15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 ARID3CA6NKF2 412 aa15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 CYP2E1P05181 493 aaPredicted RBP15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 RARSP54136 660 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-203ENST00000394573 BIVM-ERCC5R4GMW8 1640 aa15.16■□□□□ 0.02
SLC28A1-203ENST00000394573 NCAPGQ9BPX3 1015 aa15.16■□□□□ 0.02
SLC28A1-203ENST00000394573 E9PCH4 1651 aa15.16■□□□□ 0.02
SLC28A1-203ENST00000394573 GCC2Q8IWJ2 1684 aa15.16■□□□□ 0.02
SLC28A1-203ENST00000394573 U2SURPO15042 1029 aaKnown RBP15.16■□□□□ 0.02
SLC28A1-203ENST00000394573 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
SLC28A1-203ENST00000394573 INSRP06213 1382 aa15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 DNAJC21Q5F1R6 531 aaKnown RBP15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 KIF14Q15058 1648 aa15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 PKD2Q13563 968 aa15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
SLC28A1-203ENST00000394573 MYO1CO00159 1063 aa15.14■□□□□ 0.01
SLC28A1-203ENST00000394573 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
SLC28A1-203ENST00000394573 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
SLC28A1-203ENST00000394573 FBXO38Q6PIJ6 1188 aa15.14■□□□□ 0.01
SLC28A1-203ENST00000394573 E2F4Q16254 413 aa15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 GADD45BO75293 160 aaPredicted RBP15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 AP5Z1O43299 807 aa15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 TBC1D9Q6ZT07 1266 aa15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 IFT57Q9NWB7 429 aa15.13■□□□□ 0.01
SLC28A1-203ENST00000394573 CASQ1P31415 396 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 STK26Q9P289 416 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 LRMPQ12912 555 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 ELF2Q15723 593 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 ZNF397Q8NF99 534 aaPredicted RBP15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 CEP83Q9Y592 693 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 ARHGAP31Q2M1Z3 1444 aa15.12■□□□□ 0.01
SLC28A1-203ENST00000394573 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
SLC28A1-203ENST00000394573 PTGS1P23219 599 aa15.11■□□□□ 0.01
SLC28A1-203ENST00000394573 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
SLC28A1-203ENST00000394573 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
SLC28A1-203ENST00000394573 SMTNL1A8MU46 457 aa15.11■□□□□ 0.01
SLC28A1-203ENST00000394573 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 MBD3O95983 291 aa15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 ZNF215Q9UL58 517 aaPredicted RBP15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 GUCY2CP25092 1073 aa15.1■□□□□ 0.01
SLC28A1-203ENST00000394573 CCDC172P0C7W6 258 aa15.09■□□□□ 0.01
SLC28A1-203ENST00000394573 ITPRIPQ8IWB1 547 aa15.09■□□□□ 0.01
SLC28A1-203ENST00000394573 ST5P78524 1137 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms