RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 RNF17Q9BXT8 1623 aaKnown RBP13.23□□□□□ -0.29
ACTN1-203ENST00000394419 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
ACTN1-203ENST00000394419 AAMPQ13685 434 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 PHACTR3Q96KR7 559 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 COG3Q96JB2 828 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 KIF1BO60333 1816 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 USP19O94966 1318 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 FAM83GA6ND36 823 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 MYOM2P54296 1465 aa13.22□□□□□ -0.29
ACTN1-203ENST00000394419 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.29
ACTN1-203ENST00000394419 C14orf37Q86TY3 774 aa13.21□□□□□ -0.3
ACTN1-203ENST00000394419 TSPYL6Q8N831 410 aa13.21□□□□□ -0.3
ACTN1-203ENST00000394419 ATAD2Q6PL18 1390 aa13.2□□□□□ -0.3
ACTN1-203ENST00000394419 CEP152O94986 1710 aa13.2□□□□□ -0.3
ACTN1-203ENST00000394419 SLC4A10Q6U841 1118 aa13.2□□□□□ -0.3
ACTN1-203ENST00000394419 FCHSD2O94868 740 aa13.2□□□□□ -0.3
ACTN1-203ENST00000394419 ZBTB7CA1YPR0 619 aa13.19□□□□□ -0.3
ACTN1-203ENST00000394419 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
ACTN1-203ENST00000394419 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-203ENST00000394419 NCLP19338 710 aaKnown RBP13.19□□□□□ -0.3
ACTN1-203ENST00000394419 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
ACTN1-203ENST00000394419 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
ACTN1-203ENST00000394419 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
ACTN1-203ENST00000394419 CT47B1P0C2W7 299 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-203ENST00000394419 GNAI1P63096 354 aa13.18□□□□□ -0.3
ACTN1-203ENST00000394419 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
ACTN1-203ENST00000394419 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
ACTN1-203ENST00000394419 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
ACTN1-203ENST00000394419 NFE2L2Q16236 605 aa13.17□□□□□ -0.3
ACTN1-203ENST00000394419 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
ACTN1-203ENST00000394419 NSD2O96028 1365 aa13.17□□□□□ -0.3
ACTN1-203ENST00000394419 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
ACTN1-203ENST00000394419 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
ACTN1-203ENST00000394419 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-203ENST00000394419 L1TD1Q5T7N2 865 aaKnown RBP13.16□□□□□ -0.3
ACTN1-203ENST00000394419 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
ACTN1-203ENST00000394419 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
ACTN1-203ENST00000394419 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
ACTN1-203ENST00000394419 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
ACTN1-203ENST00000394419 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.3
ACTN1-203ENST00000394419 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
ACTN1-203ENST00000394419 MCM4P33991 863 aa13.15□□□□□ -0.3
ACTN1-203ENST00000394419 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
ACTN1-203ENST00000394419 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
ACTN1-203ENST00000394419 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
ACTN1-203ENST00000394419 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-203ENST00000394419 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
ACTN1-203ENST00000394419 YEATS2Q9ULM3 1422 aa13.14□□□□□ -0.31
ACTN1-203ENST00000394419 MYOM1P52179 1685 aa13.14□□□□□ -0.31
ACTN1-203ENST00000394419 TRAK2O60296 914 aa13.14□□□□□ -0.31
ACTN1-203ENST00000394419 MCM10Q7L590 875 aa13.14□□□□□ -0.31
ACTN1-203ENST00000394419 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
ACTN1-203ENST00000394419 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-203ENST00000394419 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-203ENST00000394419 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
ACTN1-203ENST00000394419 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
ACTN1-203ENST00000394419 YTHDC2Q9H6S0 1430 aaKnown RBP13.12□□□□□ -0.31
ACTN1-203ENST00000394419 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
ACTN1-203ENST00000394419 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
ACTN1-203ENST00000394419 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
ACTN1-203ENST00000394419 ARAP3Q8WWN8 1544 aa13.12□□□□□ -0.31
ACTN1-203ENST00000394419 VAMP4O75379 141 aa13.12□□□□□ -0.31
ACTN1-203ENST00000394419 NUTM2GQ5VZR2 741 aa13.12□□□□□ -0.31
ACTN1-203ENST00000394419 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
ACTN1-203ENST00000394419 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-203ENST00000394419 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
ACTN1-203ENST00000394419 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-203ENST00000394419 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
ACTN1-203ENST00000394419 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
ACTN1-203ENST00000394419 MROH2AA6NES4 1674 aa13.11□□□□□ -0.31
ACTN1-203ENST00000394419 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-203ENST00000394419 NUCB1Q02818 461 aa13.11□□□□□ -0.31
ACTN1-203ENST00000394419 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
ACTN1-203ENST00000394419 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
ACTN1-203ENST00000394419 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
ACTN1-203ENST00000394419 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
ACTN1-203ENST00000394419 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
ACTN1-203ENST00000394419 QRICH2Q9H0J4 1663 aa13.1□□□□□ -0.31
ACTN1-203ENST00000394419 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-203ENST00000394419 NGDNQ8NEJ9 315 aaKnown RBP13.1□□□□□ -0.31
ACTN1-203ENST00000394419 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
ACTN1-203ENST00000394419 ADGRB3O60242 1522 aa13.1□□□□□ -0.31
ACTN1-203ENST00000394419 IL16Q14005 1332 aa13.1□□□□□ -0.31
ACTN1-203ENST00000394419 GOLGA6L22H0YM25 854 aa13.09□□□□□ -0.31
ACTN1-203ENST00000394419 TRIM44Q96DX7 344 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-203ENST00000394419 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
ACTN1-203ENST00000394419 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
ACTN1-203ENST00000394419 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-203ENST00000394419 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
ACTN1-203ENST00000394419 GCC1Q96CN9 775 aa13.09□□□□□ -0.31
ACTN1-203ENST00000394419 ABCC3O15438 1527 aa13.09□□□□□ -0.31
ACTN1-203ENST00000394419 AMPHP49418 695 aa13.08□□□□□ -0.31
ACTN1-203ENST00000394419 CASC1Q6TDU7 716 aa13.08□□□□□ -0.31
ACTN1-203ENST00000394419 DEPDC5O75140 1603 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-203ENST00000394419 TBC1D9Q6ZT07 1266 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-203ENST00000394419 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 MROH1Q8NDA8 1641 aa13.08□□□□□ -0.32
ACTN1-203ENST00000394419 VWDEQ8N2E2 1590 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms