RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 FBXO41Q8TF61 875 aa26.6■■□□□ 1.85
PSEN1-203ENST00000394157 TTC21AQ8NDW8 1320 aa26.59■■□□□ 1.85
PSEN1-203ENST00000394157 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
PSEN1-203ENST00000394157 PHLPP1O60346 1717 aa26.58■■□□□ 1.85
PSEN1-203ENST00000394157 TRPM3Q9HCF6 1732 aaPredicted RBP26.58■■□□□ 1.85
PSEN1-203ENST00000394157 DDX17Q92841 729 aaKnown RBP26.57■■□□□ 1.84
PSEN1-203ENST00000394157 CARD14Q9BXL6 1004 aa26.57■■□□□ 1.84
PSEN1-203ENST00000394157 TTC21BQ7Z4L5 1316 aa26.57■■□□□ 1.84
PSEN1-203ENST00000394157 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
PSEN1-203ENST00000394157 NSD3Q9BZ95 1437 aa26.56■■□□□ 1.84
PSEN1-203ENST00000394157 XPCQ01831 940 aaPredicted RBP26.55■■□□□ 1.84
PSEN1-203ENST00000394157 DDX10Q13206 875 aaKnown RBP26.55■■□□□ 1.84
PSEN1-203ENST00000394157 COL16A1Q07092 1604 aaPredicted RBP26.54■■□□□ 1.84
PSEN1-203ENST00000394157 KNSTRNQ9Y448 316 aa26.54■■□□□ 1.84
PSEN1-203ENST00000394157 TNS3Q68CZ2 1445 aa26.54■■□□□ 1.84
PSEN1-203ENST00000394157 PER1O15534 1290 aaPredicted RBP26.53■■□□□ 1.84
PSEN1-203ENST00000394157 CGNL1Q0VF96 1302 aa26.53■■□□□ 1.84
PSEN1-203ENST00000394157 SPATA31A3Q5VYP0 1347 aa26.53■■□□□ 1.84
PSEN1-203ENST00000394157 ARHGEF10O15013 1369 aa26.53■■□□□ 1.84
PSEN1-203ENST00000394157 PAK3O75914 559 aaPredicted RBP26.52■■□□□ 1.84
PSEN1-203ENST00000394157 ALS2Q96Q42 1657 aa26.5■■□□□ 1.83
PSEN1-203ENST00000394157 NSD2O96028 1365 aa26.49■■□□□ 1.83
PSEN1-203ENST00000394157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.49■■□□□ 1.83
PSEN1-203ENST00000394157 NPC1L1Q9UHC9 1359 aa26.48■■□□□ 1.83
PSEN1-203ENST00000394157 ABTB2Q8N961 1025 aa26.48■■□□□ 1.83
PSEN1-203ENST00000394157 PPP4R3CPQ6ZMV5 832 aa26.47■■□□□ 1.83
PSEN1-203ENST00000394157 USP31Q70CQ4 1352 aa26.46■■□□□ 1.83
PSEN1-203ENST00000394157 HSPA1LP34931 641 aa26.46■■□□□ 1.83
PSEN1-203ENST00000394157 PIK3C2AO00443 1686 aa26.46■■□□□ 1.83
PSEN1-203ENST00000394157 KIF20BQ96Q89 1820 aa26.45■■□□□ 1.82
PSEN1-203ENST00000394157 FYB1O15117 783 aa26.45■■□□□ 1.82
PSEN1-203ENST00000394157 NLRP13Q86W25 1043 aa26.45■■□□□ 1.82
PSEN1-203ENST00000394157 USP54Q70EL1 1684 aa26.44■■□□□ 1.82
PSEN1-203ENST00000394157 AMER1Q5JTC6 1135 aaPredicted RBP26.44■■□□□ 1.82
PSEN1-203ENST00000394157 LMOD2Q6P5Q4 547 aa26.44■■□□□ 1.82
PSEN1-203ENST00000394157 NME9Q86XW9 330 aa26.44■■□□□ 1.82
PSEN1-203ENST00000394157 JCADQ9P266 1359 aa26.43■■□□□ 1.82
PSEN1-203ENST00000394157 MED1Q15648 1581 aaPredicted RBP26.42■■□□□ 1.82
PSEN1-203ENST00000394157 NLRP6P59044 892 aa26.42■■□□□ 1.82
PSEN1-203ENST00000394157 PNPLA6Q8IY17 1366 aa26.42■■□□□ 1.82
PSEN1-203ENST00000394157 COL22A1Q8NFW1 1626 aaPredicted RBP26.42■■□□□ 1.82
PSEN1-203ENST00000394157 COG3Q96JB2 828 aa26.41■■□□□ 1.82
PSEN1-203ENST00000394157 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
PSEN1-203ENST00000394157 OVOS2A0A0J9YW53 1432 aa26.4■■□□□ 1.82
PSEN1-203ENST00000394157 OVOS2Q6IE36 1432 aa26.4■■□□□ 1.82
PSEN1-203ENST00000394157 USP19O94966 1318 aa26.39■■□□□ 1.81
PSEN1-203ENST00000394157 GGNBP2Q9H3C7 697 aa26.38■■□□□ 1.81
PSEN1-203ENST00000394157 ANKRD26Q9UPS8 1709 aa26.38■■□□□ 1.81
PSEN1-203ENST00000394157 NUTM2GQ5VZR2 741 aa26.36■■□□□ 1.81
PSEN1-203ENST00000394157 SLIT3O75094 1523 aa26.35■■□□□ 1.81
PSEN1-203ENST00000394157 KCNH5Q8NCM2 988 aa26.35■■□□□ 1.81
PSEN1-203ENST00000394157 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
PSEN1-203ENST00000394157 SPATA31A6Q5VVP1 1343 aa26.34■■□□□ 1.81
PSEN1-203ENST00000394157 ZRANB1Q9UGI0 708 aa26.33■■□□□ 1.81
PSEN1-203ENST00000394157 CRYBG1Q9Y4K1 1723 aa26.33■■□□□ 1.81
PSEN1-203ENST00000394157 CC2D1BQ5T0F9 858 aaKnown RBP26.32■■□□□ 1.8
PSEN1-203ENST00000394157 MORC1Q86VD1 984 aa26.32■■□□□ 1.8
PSEN1-203ENST00000394157 PHRF1Q9P1Y6 1649 aaKnown RBP26.3■■□□□ 1.8
PSEN1-203ENST00000394157 GCP02774 474 aa26.3■■□□□ 1.8
PSEN1-203ENST00000394157 ABCA3Q99758 1704 aa26.29■■□□□ 1.8
PSEN1-203ENST00000394157 HAP1P54257 671 aaPredicted RBP26.28■■□□□ 1.8
PSEN1-203ENST00000394157 AATKQ6ZMQ8 1374 aa26.28■■□□□ 1.8
PSEN1-203ENST00000394157 RALBP1Q15311 655 aa26.27■■□□□ 1.8
PSEN1-203ENST00000394157 NFAT5O94916 1531 aa26.26■■□□□ 1.79
PSEN1-203ENST00000394157 PARD3Q8TEW0 1356 aa26.26■■□□□ 1.79
PSEN1-203ENST00000394157 CABLES1Q8TDN4 633 aa26.26■■□□□ 1.79
PSEN1-203ENST00000394157 CPDO75976 1380 aa26.24■■□□□ 1.79
PSEN1-203ENST00000394157 PRKRIP1Q9H875 184 aaPredicted RBP26.22■■□□□ 1.79
PSEN1-203ENST00000394157 KIF24Q5T7B8 1368 aa26.21■■□□□ 1.79
PSEN1-203ENST00000394157 ANP32CO43423 234 aa26.21■■□□□ 1.79
PSEN1-203ENST00000394157 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
PSEN1-203ENST00000394157 PLEKHG5O94827 1062 aa26.2■■□□□ 1.78
PSEN1-203ENST00000394157 ARHGEF25Q86VW2 580 aa26.2■■□□□ 1.78
PSEN1-203ENST00000394157 ABCC6O95255 1503 aa26.19■■□□□ 1.78
PSEN1-203ENST00000394157 SOX12O15370 315 aa26.19■■□□□ 1.78
PSEN1-203ENST00000394157 CNGB1Q14028 1251 aaPredicted RBP26.19■■□□□ 1.78
PSEN1-203ENST00000394157 NUTM2BA6NNL0 878 aaPredicted RBP26.18■■□□□ 1.78
PSEN1-203ENST00000394157 NUTM2EB1AL46 878 aaPredicted RBP26.18■■□□□ 1.78
PSEN1-203ENST00000394157 TNNT2P45379 298 aaPredicted RBP26.18■■□□□ 1.78
PSEN1-203ENST00000394157 NUTM2AQ8IVF1 878 aaPredicted RBP26.18■■□□□ 1.78
PSEN1-203ENST00000394157 KIAA0232Q92628 1395 aa26.18■■□□□ 1.78
PSEN1-203ENST00000394157 ZC3H6P61129 1189 aaKnown RBP26.17■■□□□ 1.78
PSEN1-203ENST00000394157 MAPK8IP2Q13387 824 aaPredicted RBP26.17■■□□□ 1.78
PSEN1-203ENST00000394157 RTL1A6NKG5 1358 aa26.17■■□□□ 1.78
PSEN1-203ENST00000394157 SMG6Q86US8 1419 aaKnown RBP26.16■■□□□ 1.78
PSEN1-203ENST00000394157 PRDM11Q9NQV5 511 aa26.16■■□□□ 1.78
PSEN1-203ENST00000394157 MAP3K19Q56UN5 1328 aa26.15■■□□□ 1.78
PSEN1-203ENST00000394157 POLKQ9UBT6 870 aa26.15■■□□□ 1.78
PSEN1-203ENST00000394157 MAP2P11137 1827 aaKnown RBP26.15■■□□□ 1.78
PSEN1-203ENST00000394157 LTN1O94822 1766 aa26.15■■□□□ 1.78
PSEN1-203ENST00000394157 MYBBP1AQ9BQG0 1328 aaKnown RBP26.14■■□□□ 1.78
PSEN1-203ENST00000394157 LRP6O75581 1613 aa26.14■■□□□ 1.78
PSEN1-203ENST00000394157 PPP2R1AP30153 589 aa26.14■■□□□ 1.78
PSEN1-203ENST00000394157 COL14A1Q05707 1796 aaKnown RBP26.13■■□□□ 1.77
PSEN1-203ENST00000394157 RRS1Q15050 365 aaKnown RBP26.13■■□□□ 1.77
PSEN1-203ENST00000394157 FLT4P35916 1363 aa26.12■■□□□ 1.77
PSEN1-203ENST00000394157 ADAMTS2O95450 1211 aa26.12■■□□□ 1.77
PSEN1-203ENST00000394157 FBLN1P23142 703 aa26.12■■□□□ 1.77
PSEN1-203ENST00000394157 AMPHP49418 695 aa26.12■■□□□ 1.77
PSEN1-203ENST00000394157 IP6K1Q92551 441 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms