RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 FAM135BQ49AJ0 1406 aa18.77■□□□□ 0.6
RNF41-202ENST00000394013 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
RNF41-202ENST00000394013 CPSF1Q10570 1443 aaKnown RBP18.77■□□□□ 0.6
RNF41-202ENST00000394013 POLKQ9UBT6 870 aa18.77■□□□□ 0.59
RNF41-202ENST00000394013 CCDC61Q9Y6R9 512 aa18.77■□□□□ 0.59
RNF41-202ENST00000394013 ATP7BP35670 1465 aa18.76■□□□□ 0.59
RNF41-202ENST00000394013 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
RNF41-202ENST00000394013 MED14O60244 1454 aa18.76■□□□□ 0.59
RNF41-202ENST00000394013 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
RNF41-202ENST00000394013 E9PSI1 815 aa18.74■□□□□ 0.59
RNF41-202ENST00000394013 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
RNF41-202ENST00000394013 ARHGAP23Q9P227 1491 aa18.73■□□□□ 0.59
RNF41-202ENST00000394013 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
RNF41-202ENST00000394013 NKTRP30414 1462 aaKnown RBP18.73■□□□□ 0.59
RNF41-202ENST00000394013 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
RNF41-202ENST00000394013 SLIT1O75093 1534 aa18.73■□□□□ 0.59
RNF41-202ENST00000394013 THEMISQ8N1K5 641 aaPredicted RBP18.73■□□□□ 0.59
RNF41-202ENST00000394013 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
RNF41-202ENST00000394013 SOX12O15370 315 aa18.72■□□□□ 0.59
RNF41-202ENST00000394013 DIAPH1O60610 1272 aaKnown RBP18.72■□□□□ 0.59
RNF41-202ENST00000394013 HMOX1P09601 288 aa18.72■□□□□ 0.59
RNF41-202ENST00000394013 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
RNF41-202ENST00000394013 CDC42BPGQ6DT37 1551 aa18.71■□□□□ 0.59
RNF41-202ENST00000394013 BCL2L13Q9BXK5 485 aa18.71■□□□□ 0.59
RNF41-202ENST00000394013 ACEP12821 1306 aa18.71■□□□□ 0.59
RNF41-202ENST00000394013 EDC4Q6P2E9 1401 aaKnown RBP18.7■□□□□ 0.58
RNF41-202ENST00000394013 KCNA6P17658 529 aa18.7■□□□□ 0.58
RNF41-202ENST00000394013 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
RNF41-202ENST00000394013 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
RNF41-202ENST00000394013 PNPLA6Q8IY17 1366 aa18.68■□□□□ 0.58
RNF41-202ENST00000394013 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
RNF41-202ENST00000394013 TRIM35Q9UPQ4 493 aa18.68■□□□□ 0.58
RNF41-202ENST00000394013 TBX22Q9Y458 520 aa18.68■□□□□ 0.58
RNF41-202ENST00000394013 MON2Q7Z3U7 1717 aa18.67■□□□□ 0.58
RNF41-202ENST00000394013 RGPD8O14715 1765 aaPredicted RBP18.67■□□□□ 0.58
RNF41-202ENST00000394013 PHACTR3Q96KR7 559 aa18.66■□□□□ 0.58
RNF41-202ENST00000394013 CEP170BQ9Y4F5 1589 aaPredicted RBP18.66■□□□□ 0.58
RNF41-202ENST00000394013 AKAP12Q02952 1782 aa18.66■□□□□ 0.58
RNF41-202ENST00000394013 COG3Q96JB2 828 aa18.66■□□□□ 0.58
RNF41-202ENST00000394013 ADGRB2O60241 1585 aa18.66■□□□□ 0.58
RNF41-202ENST00000394013 ITSN1Q15811 1721 aa18.66■□□□□ 0.58
RNF41-202ENST00000394013 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
RNF41-202ENST00000394013 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.58
RNF41-202ENST00000394013 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.58
RNF41-202ENST00000394013 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
RNF41-202ENST00000394013 RIPK4P57078 832 aa18.64■□□□□ 0.57
RNF41-202ENST00000394013 PANK1Q8TE04 598 aa18.64■□□□□ 0.57
RNF41-202ENST00000394013 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
RNF41-202ENST00000394013 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.57
RNF41-202ENST00000394013 RSPH6AQ9H0K4 717 aa18.63■□□□□ 0.57
RNF41-202ENST00000394013 IL13P35225 146 aa18.62■□□□□ 0.57
RNF41-202ENST00000394013 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
RNF41-202ENST00000394013 TOPAZ1Q8N9V7 1692 aa18.61■□□□□ 0.57
RNF41-202ENST00000394013 CCDC27Q2M243 656 aa18.61■□□□□ 0.57
RNF41-202ENST00000394013 NUTM2GQ5VZR2 741 aa18.61■□□□□ 0.57
RNF41-202ENST00000394013 RARSP54136 660 aaKnown RBP18.61■□□□□ 0.57
RNF41-202ENST00000394013 NGEFQ8N5V2 710 aa18.61■□□□□ 0.57
RNF41-202ENST00000394013 PLEKHG3A1L390 1219 aa18.6■□□□□ 0.57
RNF41-202ENST00000394013 DIP2AQ14689 1571 aa18.6■□□□□ 0.57
RNF41-202ENST00000394013 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
RNF41-202ENST00000394013 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
RNF41-202ENST00000394013 USP6P35125 1406 aa18.59■□□□□ 0.57
RNF41-202ENST00000394013 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
RNF41-202ENST00000394013 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
RNF41-202ENST00000394013 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
RNF41-202ENST00000394013 NRKQ7Z2Y5 1582 aa18.58■□□□□ 0.57
RNF41-202ENST00000394013 RLBP1P12271 317 aa18.58■□□□□ 0.57
RNF41-202ENST00000394013 EXOSC9Q06265 439 aaKnown RBP18.58■□□□□ 0.57
RNF41-202ENST00000394013 XRN1Q8IZH2 1706 aaKnown RBP18.58■□□□□ 0.56
RNF41-202ENST00000394013 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
RNF41-202ENST00000394013 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
RNF41-202ENST00000394013 PTCH1Q13635 1447 aa18.58■□□□□ 0.56
RNF41-202ENST00000394013 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
RNF41-202ENST00000394013 HSP90AB2PQ58FF8 381 aa18.57■□□□□ 0.56
RNF41-202ENST00000394013 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.57■□□□□ 0.56
RNF41-202ENST00000394013 LAS1LQ9Y4W2 734 aaKnown RBP18.57■□□□□ 0.56
RNF41-202ENST00000394013 ADAMTSL3P82987 1691 aa18.56■□□□□ 0.56
RNF41-202ENST00000394013 FCHSD2O94868 740 aa18.56■□□□□ 0.56
RNF41-202ENST00000394013 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
RNF41-202ENST00000394013 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
RNF41-202ENST00000394013 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
RNF41-202ENST00000394013 OVOS2A0A0J9YW53 1432 aa18.54■□□□□ 0.56
RNF41-202ENST00000394013 OVOS2Q6IE36 1432 aa18.54■□□□□ 0.56
RNF41-202ENST00000394013 CDK12Q9NYV4 1490 aaPredicted RBP18.54■□□□□ 0.56
RNF41-202ENST00000394013 MSH5O43196 834 aa18.54■□□□□ 0.56
RNF41-202ENST00000394013 DCTN1Q14203 1278 aa18.54■□□□□ 0.56
RNF41-202ENST00000394013 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
RNF41-202ENST00000394013 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
RNF41-202ENST00000394013 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
RNF41-202ENST00000394013 SSH2Q76I76 1423 aa18.53■□□□□ 0.56
RNF41-202ENST00000394013 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
RNF41-202ENST00000394013 KDM2BQ8NHM5 1336 aa18.52■□□□□ 0.56
RNF41-202ENST00000394013 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
RNF41-202ENST00000394013 IGHDP01880 384 aa18.5■□□□□ 0.55
RNF41-202ENST00000394013 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
RNF41-202ENST00000394013 MAP3K19Q56UN5 1328 aa18.5■□□□□ 0.55
RNF41-202ENST00000394013 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
RNF41-202ENST00000394013 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
RNF41-202ENST00000394013 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
RNF41-202ENST00000394013 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms