RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 RCAN3Q9UKA8 241 aa29.28■■■□□ 2.28
HMGA2-203ENST00000393578 PNPLA6Q8IY17 1366 aa29.27■■■□□ 2.28
HMGA2-203ENST00000393578 ACEP12821 1306 aa29.27■■■□□ 2.28
HMGA2-203ENST00000393578 NME9Q86XW9 330 aa29.26■■■□□ 2.28
HMGA2-203ENST00000393578 PELP1Q8IZL8 1130 aaKnown RBP29.26■■■□□ 2.28
HMGA2-203ENST00000393578 NUTM2FA1L443 756 aa29.24■■■□□ 2.27
HMGA2-203ENST00000393578 NKTRP30414 1462 aaKnown RBP29.24■■■□□ 2.27
HMGA2-203ENST00000393578 NPHP4O75161 1426 aaPredicted RBP29.23■■■□□ 2.27
HMGA2-203ENST00000393578 U2AF1L5P0DN76 240 aaPredicted RBP29.23■■■□□ 2.27
HMGA2-203ENST00000393578 U2AF1Q01081 240 aaKnown RBP eCLIP29.23■■■□□ 2.278e-8■■□□□ 13.6
HMGA2-203ENST00000393578 NRKQ7Z2Y5 1582 aa29.23■■■□□ 2.27
HMGA2-203ENST00000393578 COG3Q96JB2 828 aa29.22■■■□□ 2.27
HMGA2-203ENST00000393578 IQSEC2Q5JU85 1478 aa29.22■■■□□ 2.27
HMGA2-203ENST00000393578 AATKQ6ZMQ8 1374 aa29.22■■■□□ 2.27
HMGA2-203ENST00000393578 POLKQ9UBT6 870 aa29.21■■■□□ 2.27
HMGA2-203ENST00000393578 USP6P35125 1406 aa29.21■■■□□ 2.27
HMGA2-203ENST00000393578 ANKARQ7Z5J8 1434 aa29.21■■■□□ 2.27
HMGA2-203ENST00000393578 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
HMGA2-203ENST00000393578 TTC21BQ7Z4L5 1316 aa29.2■■■□□ 2.26
HMGA2-203ENST00000393578 DIAPH1O60610 1272 aaKnown RBP29.19■■■□□ 2.26
HMGA2-203ENST00000393578 SLFN5Q08AF3 891 aa29.19■■■□□ 2.26
HMGA2-203ENST00000393578 PPP4R2Q9NY27 417 aa29.19■■■□□ 2.26
HMGA2-203ENST00000393578 NCBP3Q53F19 620 aaKnown RBP29.19■■■□□ 2.26
HMGA2-203ENST00000393578 TCP11L2Q8N4U5 519 aa29.19■■■□□ 2.26
HMGA2-203ENST00000393578 TRMT2AQ8IZ69 625 aaKnown RBP29.18■■■□□ 2.26
HMGA2-203ENST00000393578 ZRANB1Q9UGI0 708 aa29.18■■■□□ 2.26
HMGA2-203ENST00000393578 MAP2P11137 1827 aaKnown RBP29.18■■■□□ 2.26
HMGA2-203ENST00000393578 U2SURPO15042 1029 aaKnown RBP29.16■■■□□ 2.26
HMGA2-203ENST00000393578 RRP1P56182 461 aaKnown RBP29.16■■■□□ 2.26
HMGA2-203ENST00000393578 WWC1Q8IX03 1113 aa29.16■■■□□ 2.26
HMGA2-203ENST00000393578 FMN2Q9NZ56 1722 aa29.16■■■□□ 2.26
HMGA2-203ENST00000393578 SSH2Q76I76 1423 aa29.15■■■□□ 2.26
HMGA2-203ENST00000393578 E9PSI1 815 aa29.15■■■□□ 2.26
HMGA2-203ENST00000393578 RGPD8O14715 1765 aaPredicted RBP29.14■■■□□ 2.26
HMGA2-203ENST00000393578 FBLN1P23142 703 aa29.13■■■□□ 2.25
HMGA2-203ENST00000393578 PHF23Q9BUL5 403 aaPredicted RBP29.13■■■□□ 2.25
HMGA2-203ENST00000393578 CDK12Q9NYV4 1490 aaPredicted RBP29.13■■■□□ 2.25
HMGA2-203ENST00000393578 CCDC27Q2M243 656 aa29.13■■■□□ 2.25
HMGA2-203ENST00000393578 PMFBP1Q8TBY8 1022 aa29.12■■■□□ 2.25
HMGA2-203ENST00000393578 NALCNQ8IZF0 1738 aa29.12■■■□□ 2.25
HMGA2-203ENST00000393578 TTC21AQ8NDW8 1320 aa29.12■■■□□ 2.25
HMGA2-203ENST00000393578 PPM1GO15355 546 aaPredicted RBP29.12■■■□□ 2.25
HMGA2-203ENST00000393578 NGDNQ8NEJ9 315 aaKnown RBP29.11■■■□□ 2.25
HMGA2-203ENST00000393578 PLEKHF1Q96S99 279 aa29.11■■■□□ 2.25
HMGA2-203ENST00000393578 PNNQ9H307 717 aaKnown RBP29.11■■■□□ 2.25
HMGA2-203ENST00000393578 OVOS2A0A0J9YW53 1432 aa29.11■■■□□ 2.25
HMGA2-203ENST00000393578 OVOS2Q6IE36 1432 aa29.11■■■□□ 2.25
HMGA2-203ENST00000393578 EMILIN1Q9Y6C2 1016 aa29.1■■■□□ 2.25
HMGA2-203ENST00000393578 SPINK5Q9NQ38 1064 aaPredicted RBP29.1■■■□□ 2.25
HMGA2-203ENST00000393578 NEUROD2Q15784 382 aa29.08■■■□□ 2.25
HMGA2-203ENST00000393578 RRP7AQ9Y3A4 280 aaKnown RBP29.08■■■□□ 2.25
HMGA2-203ENST00000393578 ADGRL3Q9HAR2 1447 aa29.07■■■□□ 2.24
HMGA2-203ENST00000393578 WDR63Q8IWG1 891 aa29.07■■■□□ 2.24
HMGA2-203ENST00000393578 DMRT2Q9Y5R5 561 aa29.06■■■□□ 2.24
HMGA2-203ENST00000393578 NWD1Q149M9 1564 aa29.06■■■□□ 2.24
HMGA2-203ENST00000393578 FCHSD2O94868 740 aa29.05■■■□□ 2.24
HMGA2-203ENST00000393578 MAPK8IP3Q9UPT6 1336 aa29.05■■■□□ 2.24
HMGA2-203ENST00000393578 USP31Q70CQ4 1352 aa29.04■■■□□ 2.24
HMGA2-203ENST00000393578 RRS1Q15050 365 aaKnown RBP29.03■■■□□ 2.24
HMGA2-203ENST00000393578 IL13P35225 146 aa29.02■■■□□ 2.24
HMGA2-203ENST00000393578 TMPOP42166 694 aaKnown RBP29■■■□□ 2.23
HMGA2-203ENST00000393578 RBM33Q96EV2 1170 aaKnown RBP28.99■■■□□ 2.23
HMGA2-203ENST00000393578 RSPH6AQ9H0K4 717 aa28.99■■■□□ 2.23
HMGA2-203ENST00000393578 LRRC7Q96NW7 1537 aa28.98■■■□□ 2.23
HMGA2-203ENST00000393578 PHF8Q9UPP1 1060 aa28.97■■■□□ 2.23
HMGA2-203ENST00000393578 B4GALNT3Q6L9W6 998 aa28.96■■■□□ 2.23
HMGA2-203ENST00000393578 PIK3C2AO00443 1686 aa28.96■■■□□ 2.23
HMGA2-203ENST00000393578 NEFMP07197 916 aa28.94■■■□□ 2.22
HMGA2-203ENST00000393578 C14orf37Q86TY3 774 aa28.94■■■□□ 2.22
HMGA2-203ENST00000393578 PRKAR2BP31323 418 aa28.93■■■□□ 2.22
HMGA2-203ENST00000393578 KDM4FA0A1W2PPD8 638 aa28.92■■■□□ 2.22
HMGA2-203ENST00000393578 PLIN1O60240 522 aa28.92■■■□□ 2.22
HMGA2-203ENST00000393578 TRIM35Q9UPQ4 493 aa28.92■■■□□ 2.22
HMGA2-203ENST00000393578 MYH16Q9H6N6 1097 aa28.92■■■□□ 2.22
HMGA2-203ENST00000393578 PROSER2Q86WR7 435 aaPredicted RBP28.91■■■□□ 2.22
HMGA2-203ENST00000393578 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.91■■■□□ 2.22
HMGA2-203ENST00000393578 RIPK4P57078 832 aa28.9■■■□□ 2.22
HMGA2-203ENST00000393578 USP54Q70EL1 1684 aa28.9■■■□□ 2.22
HMGA2-203ENST00000393578 HMOX1P09601 288 aa28.9■■■□□ 2.22
HMGA2-203ENST00000393578 EXOC6Q8TAG9 804 aa28.89■■■□□ 2.22
HMGA2-203ENST00000393578 PEAK1Q9H792 1746 aa28.89■■■□□ 2.21
HMGA2-203ENST00000393578 NLRP6P59044 892 aa28.88■■■□□ 2.21
HMGA2-203ENST00000393578 CCDC136Q96JN2 1154 aa28.88■■■□□ 2.21
HMGA2-203ENST00000393578 IL16Q14005 1332 aa28.87■■■□□ 2.21
HMGA2-203ENST00000393578 EIF4A2Q14240 407 aaKnown RBP28.87■■■□□ 2.21
HMGA2-203ENST00000393578 ESCO1Q5FWF5 840 aa28.87■■■□□ 2.21
HMGA2-203ENST00000393578 MAP3K19Q56UN5 1328 aa28.86■■■□□ 2.21
HMGA2-203ENST00000393578 ABTB2Q8N961 1025 aa28.85■■■□□ 2.21
HMGA2-203ENST00000393578 SBNO1A3KN83 1393 aa28.85■■■□□ 2.21
HMGA2-203ENST00000393578 NFE2L2Q16236 605 aa28.84■■■□□ 2.21
HMGA2-203ENST00000393578 PHACTR3Q96KR7 559 aa28.84■■■□□ 2.21
HMGA2-203ENST00000393578 SOX12O15370 315 aa28.84■■■□□ 2.21
HMGA2-203ENST00000393578 PAK3O75914 559 aaPredicted RBP28.84■■■□□ 2.21
HMGA2-203ENST00000393578 FLT4P35916 1363 aa28.84■■■□□ 2.21
HMGA2-203ENST00000393578 MARF1Q9Y4F3 1742 aaKnown RBP28.83■■■□□ 2.21
HMGA2-203ENST00000393578 HSP90AB2PQ58FF8 381 aa28.83■■■□□ 2.21
HMGA2-203ENST00000393578 STRCP1A6NGW2 1772 aa28.83■■■□□ 2.21
HMGA2-203ENST00000393578 HSPA2P54652 639 aa28.82■■■□□ 2.2
HMGA2-203ENST00000393578 C19orf44Q9H6X5 657 aa28.82■■■□□ 2.2
HMGA2-203ENST00000393578 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms