RNA–Protein interactions for RNA: ENST00000393412.7

MDM2-209, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-209ENST00000393412 SF3B2Q13435 895 aaKnown RBP23.08■■□□□ 1.28
MDM2-209ENST00000393412 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.28
MDM2-209ENST00000393412 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 NBPF1Q3BBV0 1214 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 KRT27Q7Z3Y8 459 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 CCDC61Q9Y6R9 512 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 ATP7BP35670 1465 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 ALS2Q96Q42 1657 aa23.05■■□□□ 1.28
MDM2-209ENST00000393412 ONECUT3O60422 494 aaPredicted RBP23.04■■□□□ 1.28
MDM2-209ENST00000393412 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
MDM2-209ENST00000393412 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
MDM2-209ENST00000393412 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
MDM2-209ENST00000393412 COL14A1Q05707 1796 aaKnown RBP23.02■■□□□ 1.27
MDM2-209ENST00000393412 ACEP12821 1306 aa23.01■■□□□ 1.27
MDM2-209ENST00000393412 SRPK2P78362 688 aaKnown RBP23.01■■□□□ 1.27
MDM2-209ENST00000393412 EP400Q96L91 3159 aa23.01■■□□□ 1.27
MDM2-209ENST00000393412 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
MDM2-209ENST00000393412 CENPJQ9HC77 1338 aaPredicted RBP23■■□□□ 1.27
MDM2-209ENST00000393412 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
MDM2-209ENST00000393412 BRWD3Q6RI45 1802 aa22.99■■□□□ 1.27
MDM2-209ENST00000393412 PLEKHG3A1L390 1219 aa22.98■■□□□ 1.27
MDM2-209ENST00000393412 POLR3AO14802 1390 aaPredicted RBP22.97■■□□□ 1.27
MDM2-209ENST00000393412 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
MDM2-209ENST00000393412 ZC3H6P61129 1189 aaKnown RBP22.96■■□□□ 1.27
MDM2-209ENST00000393412 CHRNA2Q15822 529 aa22.96■■□□□ 1.27
MDM2-209ENST00000393412 KIAA0232Q92628 1395 aa22.96■■□□□ 1.27
MDM2-209ENST00000393412 NRAPQ86VF7 1730 aa22.95■■□□□ 1.27
MDM2-209ENST00000393412 SPATA31A5Q5VU36 1347 aa22.95■■□□□ 1.27
MDM2-209ENST00000393412 SPATA31A7Q8IWB4 1347 aa22.95■■□□□ 1.27
MDM2-209ENST00000393412 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
MDM2-209ENST00000393412 STRN4Q9NRL3 753 aa22.95■■□□□ 1.26
MDM2-209ENST00000393412 TRPM1Q7Z4N2 1603 aa22.95■■□□□ 1.26
MDM2-209ENST00000393412 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
MDM2-209ENST00000393412 EVA1CP58658 441 aa22.93■■□□□ 1.26
MDM2-209ENST00000393412 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
MDM2-209ENST00000393412 TOPAZ1Q8N9V7 1692 aa22.92■■□□□ 1.26
MDM2-209ENST00000393412 CRYBG1Q9Y4K1 1723 aa22.92■■□□□ 1.26
MDM2-209ENST00000393412 BAG6P46379 1132 aa22.91■■□□□ 1.26
MDM2-209ENST00000393412 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
MDM2-209ENST00000393412 SPATA31A1Q5TZJ5 1347 aa22.88■■□□□ 1.25
MDM2-209ENST00000393412 PHRF1Q9P1Y6 1649 aaKnown RBP22.88■■□□□ 1.25
MDM2-209ENST00000393412 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
MDM2-209ENST00000393412 ROCK2O75116 1388 aaKnown RBP22.87■■□□□ 1.25
MDM2-209ENST00000393412 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
MDM2-209ENST00000393412 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
MDM2-209ENST00000393412 QRICH2Q9H0J4 1663 aa22.86■■□□□ 1.25
MDM2-209ENST00000393412 FAM182BQ5T319 152 aa22.86■■□□□ 1.25
MDM2-209ENST00000393412 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
MDM2-209ENST00000393412 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
MDM2-209ENST00000393412 GCP02774 474 aa22.83■■□□□ 1.25
MDM2-209ENST00000393412 USP19O94966 1318 aa22.83■■□□□ 1.25
MDM2-209ENST00000393412 ZBTB7CA1YPR0 619 aa22.82■■□□□ 1.24
MDM2-209ENST00000393412 CPDO75976 1380 aa22.82■■□□□ 1.24
MDM2-209ENST00000393412 NLRP6P59044 892 aa22.82■■□□□ 1.24
MDM2-209ENST00000393412 SSH2Q76I76 1423 aa22.81■■□□□ 1.24
MDM2-209ENST00000393412 PDE3BQ13370 1112 aa22.81■■□□□ 1.24
MDM2-209ENST00000393412 THSD7AQ9UPZ6 1657 aa22.8■■□□□ 1.24
MDM2-209ENST00000393412 NRKQ7Z2Y5 1582 aa22.8■■□□□ 1.24
MDM2-209ENST00000393412 LARP1Q6PKG0 1096 aaKnown RBP22.8■■□□□ 1.24
MDM2-209ENST00000393412 FAM196AQ6ZSG2 479 aa22.8■■□□□ 1.24
MDM2-209ENST00000393412 USP6P35125 1406 aa22.79■■□□□ 1.24
MDM2-209ENST00000393412 EN1Q05925 392 aaPredicted RBP22.79■■□□□ 1.24
MDM2-209ENST00000393412 BARGINQ6ZT62 677 aa22.79■■□□□ 1.24
MDM2-209ENST00000393412 TCP11L2Q8N4U5 519 aa22.79■■□□□ 1.24
MDM2-209ENST00000393412 CAMTA1Q9Y6Y1 1673 aa22.77■■□□□ 1.24
MDM2-209ENST00000393412 SRCAPQ6ZRS2 3230 aa22.76■■□□□ 1.23
MDM2-209ENST00000393412 ZNF692Q9BU19 519 aaPredicted RBP22.76■■□□□ 1.23
MDM2-209ENST00000393412 RGPD1P0DJD0 1748 aa22.76■■□□□ 1.23
MDM2-209ENST00000393412 TRIM37O94972 964 aa22.75■■□□□ 1.23
MDM2-209ENST00000393412 THRAP3Q9Y2W1 955 aaKnown RBP22.75■■□□□ 1.23
MDM2-209ENST00000393412 CARD11Q9BXL7 1154 aa22.74■■□□□ 1.23
MDM2-209ENST00000393412 SBNO2Q9Y2G9 1366 aa22.74■■□□□ 1.23
MDM2-209ENST00000393412 PSDA5PKW4 1024 aaPredicted RBP22.74■■□□□ 1.23
MDM2-209ENST00000393412 LMO7Q8WWI1 1683 aa22.71■■□□□ 1.23
MDM2-209ENST00000393412 APBA3O96018 575 aa22.71■■□□□ 1.23
MDM2-209ENST00000393412 POTEDQ86YR6 584 aa22.71■■□□□ 1.23
MDM2-209ENST00000393412 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.23
MDM2-209ENST00000393412 COL5A2P05997 1499 aaPredicted RBP22.7■■□□□ 1.22
MDM2-209ENST00000393412 AATKQ6ZMQ8 1374 aa22.7■■□□□ 1.22
MDM2-209ENST00000393412 TTC21BQ7Z4L5 1316 aa22.7■■□□□ 1.22
MDM2-209ENST00000393412 EZH2Q15910 746 aaKnown RBP22.69■■□□□ 1.22
MDM2-209ENST00000393412 TOM1L2Q6ZVM7 507 aa22.69■■□□□ 1.22
MDM2-209ENST00000393412 KCNH5Q8NCM2 988 aa22.69■■□□□ 1.22
MDM2-209ENST00000393412 DISP2A7MBM2 1401 aa22.69■■□□□ 1.22
MDM2-209ENST00000393412 CRB1P82279 1406 aa22.69■■□□□ 1.22
MDM2-209ENST00000393412 SOX12O15370 315 aa22.68■■□□□ 1.22
MDM2-209ENST00000393412 TTC21AQ8NDW8 1320 aa22.68■■□□□ 1.22
MDM2-209ENST00000393412 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
MDM2-209ENST00000393412 SLIT3O75094 1523 aa22.67■■□□□ 1.22
MDM2-209ENST00000393412 C11orf95C9JLR9 678 aaPredicted RBP22.66■■□□□ 1.22
MDM2-209ENST00000393412 R3HDM1Q15032 1099 aaKnown RBP22.65■■□□□ 1.22
MDM2-209ENST00000393412 PCGF6Q9BYE7 350 aa22.65■■□□□ 1.22
MDM2-209ENST00000393412 TIMELESSQ9UNS1 1208 aa22.65■■□□□ 1.22
MDM2-209ENST00000393412 TNS1Q9HBL0 1735 aaKnown RBP22.65■■□□□ 1.22
MDM2-209ENST00000393412 CSB-PGBD3P0DP91 1061 aa22.65■■□□□ 1.22
MDM2-209ENST00000393412 CAMKK2Q96RR4 588 aa22.65■■□□□ 1.22
MDM2-209ENST00000393412 PIK3C2AO00443 1686 aa22.65■■□□□ 1.22
MDM2-209ENST00000393412 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
MDM2-209ENST00000393412 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms