RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
PTGFRN-201ENST00000393203 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.52
PTGFRN-201ENST00000393203 WDR97A6NE52 1622 aa18.27■□□□□ 0.52
PTGFRN-201ENST00000393203 CUX1P39880 1505 aa18.27■□□□□ 0.51
PTGFRN-201ENST00000393203 MTERF4Q7Z6M4 381 aaKnown RBP18.27■□□□□ 0.51
PTGFRN-201ENST00000393203 KINO60870 393 aaKnown RBP18.26■□□□□ 0.51
PTGFRN-201ENST00000393203 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
PTGFRN-201ENST00000393203 MCM4P33991 863 aa18.26■□□□□ 0.51
PTGFRN-201ENST00000393203 AMOTL1Q8IY63 956 aa18.26■□□□□ 0.51
PTGFRN-201ENST00000393203 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
PTGFRN-201ENST00000393203 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
PTGFRN-201ENST00000393203 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
PTGFRN-201ENST00000393203 GCC1Q96CN9 775 aa18.25■□□□□ 0.51
PTGFRN-201ENST00000393203 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
PTGFRN-201ENST00000393203 NOM1Q5C9Z4 860 aaKnown RBP18.24■□□□□ 0.51
PTGFRN-201ENST00000393203 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
PTGFRN-201ENST00000393203 ACBD3Q9H3P7 528 aa18.24■□□□□ 0.51
PTGFRN-201ENST00000393203 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
PTGFRN-201ENST00000393203 C20orf194Q5TEA3 1177 aa18.23■□□□□ 0.51
PTGFRN-201ENST00000393203 TCEAL9Q9UHQ7 104 aa18.23■□□□□ 0.51
PTGFRN-201ENST00000393203 ARAP1Q96P48 1450 aa18.23■□□□□ 0.51
PTGFRN-201ENST00000393203 ESPNB1AK53 854 aa18.23■□□□□ 0.51
PTGFRN-201ENST00000393203 CFTRP13569 1480 aa18.22■□□□□ 0.51
PTGFRN-201ENST00000393203 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
PTGFRN-201ENST00000393203 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
PTGFRN-201ENST00000393203 C11orf95C9JLR9 678 aaPredicted RBP18.22■□□□□ 0.51
PTGFRN-201ENST00000393203 SIL1Q9H173 461 aa18.21■□□□□ 0.51
PTGFRN-201ENST00000393203 GNAI3P08754 354 aa18.21■□□□□ 0.51
PTGFRN-201ENST00000393203 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
PTGFRN-201ENST00000393203 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
PTGFRN-201ENST00000393203 TNMDQ9H2S6 317 aa18.21■□□□□ 0.51
PTGFRN-201ENST00000393203 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
PTGFRN-201ENST00000393203 FAM177BA6PVY3 158 aa18.21■□□□□ 0.5
PTGFRN-201ENST00000393203 CCDC30Q5VVM6 783 aa18.21■□□□□ 0.5
PTGFRN-201ENST00000393203 H0YHG0 523 aa18.2■□□□□ 0.5
PTGFRN-201ENST00000393203 GNAI2P04899 355 aa18.2■□□□□ 0.5
PTGFRN-201ENST00000393203 HMGN5P82970 282 aaKnown RBP18.2■□□□□ 0.5
PTGFRN-201ENST00000393203 RRP12Q5JTH9 1297 aaKnown RBP18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 CCDC192P0DO97 292 aa18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 MCM2P49736 904 aa18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 STK38Q15208 465 aa18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 SYCE3A1L190 88 aa18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 NLRP6P59044 892 aa18.19■□□□□ 0.5
PTGFRN-201ENST00000393203 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
PTGFRN-201ENST00000393203 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
PTGFRN-201ENST00000393203 NLRP2Q9NX02 1062 aa18.18■□□□□ 0.5
PTGFRN-201ENST00000393203 SERPINC1P01008 464 aa18.18■□□□□ 0.5
PTGFRN-201ENST00000393203 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
PTGFRN-201ENST00000393203 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 CCDC66A2RUB6 948 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 CCDC112Q8NEF3 446 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 OFD1O75665 1012 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
PTGFRN-201ENST00000393203 EPS15P42566 896 aa18.16■□□□□ 0.5
PTGFRN-201ENST00000393203 ME1P48163 572 aa18.16■□□□□ 0.5
PTGFRN-201ENST00000393203 AXDND1Q5T1B0 1012 aaPredicted RBP18.16■□□□□ 0.5
PTGFRN-201ENST00000393203 CWC15Q9P013 229 aaKnown RBP18.16■□□□□ 0.5
PTGFRN-201ENST00000393203 PDCP20941 246 aa18.16■□□□□ 0.5
PTGFRN-201ENST00000393203 WDR33Q9C0J8 1336 aaKnown RBP18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 ERICH4A6NGS2 130 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 CT47A1Q5JQC4 288 aaPredicted RBP18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 PRAM1Q96QH2 718 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 IL1RAPL2Q9NP60 686 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 SULT6B1Q6IMI4 303 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 BRMS1Q9HCU9 246 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
PTGFRN-201ENST00000393203 PRKCSHP14314 528 aaPredicted RBP18.14■□□□□ 0.49
PTGFRN-201ENST00000393203 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
PTGFRN-201ENST00000393203 CAMK4Q16566 473 aa18.14■□□□□ 0.49
PTGFRN-201ENST00000393203 TMEM57Q8N5G2 664 aa18.14■□□□□ 0.49
PTGFRN-201ENST00000393203 ZNF396Q96N95 335 aaPredicted RBP18.14■□□□□ 0.49
PTGFRN-201ENST00000393203 FILIP1Q7Z7B0 1213 aa18.13■□□□□ 0.49
PTGFRN-201ENST00000393203 CTDP1Q9Y5B0 961 aaPredicted RBP18.13■□□□□ 0.49
PTGFRN-201ENST00000393203 CDR1P51861 262 aa18.12■□□□□ 0.49
PTGFRN-201ENST00000393203 ZFYVE27Q5T4F4 411 aa18.12■□□□□ 0.49
PTGFRN-201ENST00000393203 LEKR1Q6ZMV7 388 aa18.12■□□□□ 0.49
PTGFRN-201ENST00000393203 CCDC43Q96MW1 224 aaKnown RBP18.12■□□□□ 0.49
PTGFRN-201ENST00000393203 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
PTGFRN-201ENST00000393203 XBP1P17861 261 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 KRT85P78386 507 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 ERCC4Q92889 916 aaPredicted RBP18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 JAKMIP1Q96N16 626 aaKnown RBP18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 FILIP1LQ4L180 1135 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 SPATA32Q96LK8 384 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
PTGFRN-201ENST00000393203 XPCQ01831 940 aaPredicted RBP18.1■□□□□ 0.49
PTGFRN-201ENST00000393203 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
PTGFRN-201ENST00000393203 SMARCE1Q969G3 411 aa18.1■□□□□ 0.49
PTGFRN-201ENST00000393203 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms