RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 MAGI2Q86UL8 1455 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 ABCC3O15438 1527 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 EVA1CP58658 441 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 NSD2O96028 1365 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 NINLQ9Y2I6 1382 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 MCM10Q7L590 875 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
ERCC2-204ENST00000391945 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
ERCC2-204ENST00000391945 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
ERCC2-204ENST00000391945 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
ERCC2-204ENST00000391945 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
ERCC2-204ENST00000391945 EFCAB6Q5THR3 1501 aa16.11■□□□□ 0.17
ERCC2-204ENST00000391945 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
ERCC2-204ENST00000391945 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
ERCC2-204ENST00000391945 SPRYD3Q8NCJ5 442 aa16.1■□□□□ 0.17
ERCC2-204ENST00000391945 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
ERCC2-204ENST00000391945 TET3O43151 1660 aa16.1■□□□□ 0.17
ERCC2-204ENST00000391945 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
ERCC2-204ENST00000391945 HSPA2P54652 639 aa16.1■□□□□ 0.17
ERCC2-204ENST00000391945 GAS2L2Q8NHY3 880 aa16.09■□□□□ 0.17
ERCC2-204ENST00000391945 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
ERCC2-204ENST00000391945 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
ERCC2-204ENST00000391945 PDE3AQ14432 1141 aa16.09■□□□□ 0.17
ERCC2-204ENST00000391945 TMEM2Q9UHN6 1383 aa16.09■□□□□ 0.17
ERCC2-204ENST00000391945 FAM83GA6ND36 823 aa16.08■□□□□ 0.17
ERCC2-204ENST00000391945 CASC1Q6TDU7 716 aa16.08■□□□□ 0.17
ERCC2-204ENST00000391945 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.17
ERCC2-204ENST00000391945 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
ERCC2-204ENST00000391945 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
ERCC2-204ENST00000391945 TBX22Q9Y458 520 aa16.08■□□□□ 0.16
ERCC2-204ENST00000391945 POLR3AO14802 1390 aaPredicted RBP16.07■□□□□ 0.16
ERCC2-204ENST00000391945 METP08581 1390 aa16.07■□□□□ 0.16
ERCC2-204ENST00000391945 MSH5O43196 834 aa16.07■□□□□ 0.16
ERCC2-204ENST00000391945 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
ERCC2-204ENST00000391945 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
ERCC2-204ENST00000391945 BCORL1Q5H9F3 1711 aa16.06■□□□□ 0.16
ERCC2-204ENST00000391945 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
ERCC2-204ENST00000391945 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
ERCC2-204ENST00000391945 AEBP1Q8IUX7 1158 aa16.06■□□□□ 0.16
ERCC2-204ENST00000391945 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
ERCC2-204ENST00000391945 ATF7IPQ6VMQ6 1270 aa16.05■□□□□ 0.16
ERCC2-204ENST00000391945 HMMRO75330 724 aa16.05■□□□□ 0.16
ERCC2-204ENST00000391945 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
ERCC2-204ENST00000391945 MYOM2P54296 1465 aa16.05■□□□□ 0.16
ERCC2-204ENST00000391945 E9PCH4 1651 aa16.05■□□□□ 0.16
ERCC2-204ENST00000391945 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
ERCC2-204ENST00000391945 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
ERCC2-204ENST00000391945 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
ERCC2-204ENST00000391945 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
ERCC2-204ENST00000391945 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
ERCC2-204ENST00000391945 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
ERCC2-204ENST00000391945 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
ERCC2-204ENST00000391945 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
ERCC2-204ENST00000391945 KIF1BO60333 1816 aa16.03■□□□□ 0.16
ERCC2-204ENST00000391945 STRN4Q9NRL3 753 aa16.03■□□□□ 0.16
ERCC2-204ENST00000391945 SBNO2Q9Y2G9 1366 aa16.03■□□□□ 0.16
ERCC2-204ENST00000391945 RNF17Q9BXT8 1623 aaKnown RBP16.03■□□□□ 0.16
ERCC2-204ENST00000391945 NPC1L1Q9UHC9 1359 aa16.03■□□□□ 0.16
ERCC2-204ENST00000391945 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
ERCC2-204ENST00000391945 TTC5Q8N0Z6 440 aa16.02■□□□□ 0.16
ERCC2-204ENST00000391945 ZNF428Q96B54 188 aa16.02■□□□□ 0.16
ERCC2-204ENST00000391945 ABCC11Q96J66 1382 aa16.02■□□□□ 0.15
ERCC2-204ENST00000391945 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
ERCC2-204ENST00000391945 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
ERCC2-204ENST00000391945 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
ERCC2-204ENST00000391945 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
ERCC2-204ENST00000391945 INO80Q9ULG1 1556 aaPredicted RBP16.01■□□□□ 0.15
ERCC2-204ENST00000391945 MVPQ14764 893 aaKnown RBP16■□□□□ 0.15
ERCC2-204ENST00000391945 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
ERCC2-204ENST00000391945 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
ERCC2-204ENST00000391945 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
ERCC2-204ENST00000391945 TMEM57Q8N5G2 664 aa16■□□□□ 0.15
ERCC2-204ENST00000391945 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
ERCC2-204ENST00000391945 PRDM11Q9NQV5 511 aa16■□□□□ 0.15
ERCC2-204ENST00000391945 TRPM1Q7Z4N2 1603 aa15.99■□□□□ 0.15
ERCC2-204ENST00000391945 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
ERCC2-204ENST00000391945 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
ERCC2-204ENST00000391945 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
ERCC2-204ENST00000391945 CEP152O94986 1710 aa15.99■□□□□ 0.15
ERCC2-204ENST00000391945 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
ERCC2-204ENST00000391945 CT47B1P0C2W7 299 aaPredicted RBP15.98■□□□□ 0.15
ERCC2-204ENST00000391945 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
ERCC2-204ENST00000391945 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
ERCC2-204ENST00000391945 HSP90AB1P08238 724 aaKnown RBP15.98■□□□□ 0.15
ERCC2-204ENST00000391945 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
ERCC2-204ENST00000391945 TNNQ9UQP3 1299 aa15.97■□□□□ 0.15
ERCC2-204ENST00000391945 GNAT3A8MTJ3 354 aa15.96■□□□□ 0.15
ERCC2-204ENST00000391945 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
ERCC2-204ENST00000391945 KCNJ4P48050 445 aa15.96■□□□□ 0.15
ERCC2-204ENST00000391945 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
ERCC2-204ENST00000391945 ORAI2Q96SN7 254 aa15.96■□□□□ 0.14
ERCC2-204ENST00000391945 MBIPQ9NS73 344 aa15.96■□□□□ 0.14
ERCC2-204ENST00000391945 MAP3K4Q9Y6R4 1608 aa15.96■□□□□ 0.14
ERCC2-204ENST00000391945 MAP3K19Q56UN5 1328 aa15.95■□□□□ 0.14
ERCC2-204ENST00000391945 NPHP1O15259 732 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms