RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TAF7LQ5H9L4 462 aa23.74■■□□□ 1.39
SHANK1-203ENST00000391813 CHMP3Q9Y3E7 222 aa23.74■■□□□ 1.39
SHANK1-203ENST00000391813 TAF3Q5VWG9 929 aa23.73■■□□□ 1.39
SHANK1-203ENST00000391813 CPLX2Q6PUV4 134 aaKnown RBP23.73■■□□□ 1.39
SHANK1-203ENST00000391813 GNAI1P63096 354 aa23.72■■□□□ 1.39
SHANK1-203ENST00000391813 K7ELQ4 463 aaPredicted RBP23.72■■□□□ 1.39
SHANK1-203ENST00000391813 IPO7O95373 1038 aaKnown RBP23.72■■□□□ 1.39
SHANK1-203ENST00000391813 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
SHANK1-203ENST00000391813 GCC1Q96CN9 775 aa23.72■■□□□ 1.39
SHANK1-203ENST00000391813 ERBINQ96RT1 1412 aa23.71■■□□□ 1.39
SHANK1-203ENST00000391813 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
SHANK1-203ENST00000391813 NAT10Q9H0A0 1025 aaKnown RBP23.71■■□□□ 1.39
SHANK1-203ENST00000391813 WDR62O43379 1518 aa23.71■■□□□ 1.39
SHANK1-203ENST00000391813 RASSF8Q8NHQ8 419 aa23.71■■□□□ 1.39
SHANK1-203ENST00000391813 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
SHANK1-203ENST00000391813 ASXL2Q76L83 1435 aa23.7■■□□□ 1.38
SHANK1-203ENST00000391813 CREBRFQ8IUR6 639 aa23.7■■□□□ 1.38
SHANK1-203ENST00000391813 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
SHANK1-203ENST00000391813 TRIM5Q9C035 493 aa23.7■■□□□ 1.38
SHANK1-203ENST00000391813 HOOK1Q9UJC3 728 aaKnown RBP23.69■■□□□ 1.38
SHANK1-203ENST00000391813 ABTB2Q8N961 1025 aa23.68■■□□□ 1.38
SHANK1-203ENST00000391813 CT47B1P0C2W7 299 aaPredicted RBP23.68■■□□□ 1.38
SHANK1-203ENST00000391813 DHX8Q14562 1220 aaKnown RBP23.68■■□□□ 1.38
SHANK1-203ENST00000391813 DMRT2Q9Y5R5 561 aa23.68■■□□□ 1.38
SHANK1-203ENST00000391813 ANKRD20A12PQ8NF67 263 aa23.67■■□□□ 1.38
SHANK1-203ENST00000391813 NLRP2Q9NX02 1062 aa23.67■■□□□ 1.38
SHANK1-203ENST00000391813 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
SHANK1-203ENST00000391813 PDCL2Q8N4E4 241 aa23.67■■□□□ 1.38
SHANK1-203ENST00000391813 HSP90AB4PQ58FF6 505 aa23.66■■□□□ 1.38
SHANK1-203ENST00000391813 ABCC5O15440 1437 aa23.66■■□□□ 1.38
SHANK1-203ENST00000391813 CCP110O43303 1012 aa23.66■■□□□ 1.38
SHANK1-203ENST00000391813 NEK4P51957 841 aa23.66■■□□□ 1.38
SHANK1-203ENST00000391813 LRRFIP1Q32MZ4 808 aaKnown RBP23.66■■□□□ 1.38
SHANK1-203ENST00000391813 PDCP20941 246 aa23.65■■□□□ 1.38
SHANK1-203ENST00000391813 DHX29Q7Z478 1369 aaKnown RBP23.65■■□□□ 1.38
SHANK1-203ENST00000391813 NAIPQ13075 1403 aa23.65■■□□□ 1.38
SHANK1-203ENST00000391813 GGNBP2Q9H3C7 697 aa23.64■■□□□ 1.38
SHANK1-203ENST00000391813 CCDC112Q8NEF3 446 aa23.64■■□□□ 1.38
SHANK1-203ENST00000391813 PLCH2O75038 1416 aa23.64■■□□□ 1.37
SHANK1-203ENST00000391813 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
SHANK1-203ENST00000391813 PES1O00541 588 aaKnown RBP23.63■■□□□ 1.37
SHANK1-203ENST00000391813 ERCC4Q92889 916 aaPredicted RBP23.63■■□□□ 1.37
SHANK1-203ENST00000391813 ATP10BO94823 1461 aa23.63■■□□□ 1.37
SHANK1-203ENST00000391813 BCAR3O75815 825 aa23.63■■□□□ 1.37
SHANK1-203ENST00000391813 AK7Q96M32 723 aa23.63■■□□□ 1.37
SHANK1-203ENST00000391813 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
SHANK1-203ENST00000391813 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
SHANK1-203ENST00000391813 ERC2O15083 957 aa23.61■■□□□ 1.37
SHANK1-203ENST00000391813 NBPF8Q3BBV2 869 aa23.61■■□□□ 1.37
SHANK1-203ENST00000391813 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
SHANK1-203ENST00000391813 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
SHANK1-203ENST00000391813 IFIT2P09913 472 aaKnown RBP23.61■■□□□ 1.37
SHANK1-203ENST00000391813 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
SHANK1-203ENST00000391813 NEXNQ0ZGT2 675 aa23.61■■□□□ 1.37
SHANK1-203ENST00000391813 CCDC192P0DO97 292 aa23.6■■□□□ 1.37
SHANK1-203ENST00000391813 CDK19Q9BWU1 502 aa23.6■■□□□ 1.37
SHANK1-203ENST00000391813 WDR7Q9Y4E6 1490 aa23.6■■□□□ 1.37
SHANK1-203ENST00000391813 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
SHANK1-203ENST00000391813 G3V3G9 751 aa23.59■■□□□ 1.37
SHANK1-203ENST00000391813 DCAF8Q5TAQ9 597 aa23.59■■□□□ 1.37
SHANK1-203ENST00000391813 CPLX1O14810 134 aa23.59■■□□□ 1.37
SHANK1-203ENST00000391813 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
SHANK1-203ENST00000391813 TRIM29Q14134 588 aa23.59■■□□□ 1.37
SHANK1-203ENST00000391813 NCOA1Q15788 1441 aa23.59■■□□□ 1.37
SHANK1-203ENST00000391813 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.37
SHANK1-203ENST00000391813 NBPF1Q3BBV0 1214 aa23.58■■□□□ 1.37
SHANK1-203ENST00000391813 WDR63Q8IWG1 891 aa23.58■■□□□ 1.36
SHANK1-203ENST00000391813 RUFY1Q96T51 708 aa23.58■■□□□ 1.36
SHANK1-203ENST00000391813 SDF4Q9BRK5 362 aa23.57■■□□□ 1.36
SHANK1-203ENST00000391813 SYTL4Q96C24 671 aaPredicted RBP23.57■■□□□ 1.36
SHANK1-203ENST00000391813 MVPQ14764 893 aaKnown RBP23.57■■□□□ 1.36
SHANK1-203ENST00000391813 LEKR1Q6ZMV7 388 aa23.57■■□□□ 1.36
SHANK1-203ENST00000391813 PSMA5P28066 241 aa23.57■■□□□ 1.36
SHANK1-203ENST00000391813 DDX58O95786 925 aaKnown RBP23.56■■□□□ 1.36
SHANK1-203ENST00000391813 CDR1P51861 262 aa23.56■■□□□ 1.36
SHANK1-203ENST00000391813 CLCN1P35523 988 aa23.56■■□□□ 1.36
SHANK1-203ENST00000391813 NUP160Q12769 1436 aa23.56■■□□□ 1.36
SHANK1-203ENST00000391813 KIF21AQ7Z4S6 1674 aa23.56■■□□□ 1.36
SHANK1-203ENST00000391813 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
SHANK1-203ENST00000391813 EIF4G3O43432 1585 aaKnown RBP23.55■■□□□ 1.36
SHANK1-203ENST00000391813 SYNE3Q6ZMZ3 975 aa23.55■■□□□ 1.36
SHANK1-203ENST00000391813 CALRP27797 417 aaKnown RBP23.55■■□□□ 1.36
SHANK1-203ENST00000391813 MCM5P33992 734 aa23.55■■□□□ 1.36
SHANK1-203ENST00000391813 CEP89Q96ST8 783 aa23.55■■□□□ 1.36
SHANK1-203ENST00000391813 AKAP17AQ02040 695 aaKnown RBP23.54■■□□□ 1.36
SHANK1-203ENST00000391813 ZMYND15Q9H091 742 aa23.54■■□□□ 1.36
SHANK1-203ENST00000391813 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
SHANK1-203ENST00000391813 FKBP5Q13451 457 aaPredicted RBP23.53■■□□□ 1.36
SHANK1-203ENST00000391813 TOMM22Q9NS69 142 aa23.53■■□□□ 1.36
SHANK1-203ENST00000391813 KINO60870 393 aaKnown RBP23.53■■□□□ 1.36
SHANK1-203ENST00000391813 FIBPO43427 364 aa23.53■■□□□ 1.36
SHANK1-203ENST00000391813 EXOSC9Q06265 439 aaKnown RBP23.53■■□□□ 1.36
SHANK1-203ENST00000391813 C9orf78Q9NZ63 289 aaPredicted RBP23.53■■□□□ 1.36
SHANK1-203ENST00000391813 CCDC61Q9Y6R9 512 aa23.53■■□□□ 1.36
SHANK1-203ENST00000391813 GAS2L2Q8NHY3 880 aa23.52■■□□□ 1.36
SHANK1-203ENST00000391813 MTHFSP49914 203 aa23.52■■□□□ 1.36
SHANK1-203ENST00000391813 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
SHANK1-203ENST00000391813 CABP1Q9NZU7 370 aa23.52■■□□□ 1.36
SHANK1-203ENST00000391813 IDI1Q13907 227 aa23.51■■□□□ 1.35
SHANK1-203ENST00000391813 ATF7IPQ6VMQ6 1270 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms