RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 HDGFL1Q5TGJ6 251 aa17.84■□□□□ 0.45
PSME4-201ENST00000389993 NCOA1Q15788 1441 aa17.83■□□□□ 0.45
PSME4-201ENST00000389993 NOS1P29475 1434 aa17.83■□□□□ 0.44
PSME4-201ENST00000389993 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
PSME4-201ENST00000389993 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
PSME4-201ENST00000389993 KIF21AQ7Z4S6 1674 aa17.82■□□□□ 0.44
PSME4-201ENST00000389993 FOXO3O43524 673 aa17.82■□□□□ 0.44
PSME4-201ENST00000389993 FANCAO15360 1455 aa17.82■□□□□ 0.44
PSME4-201ENST00000389993 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
PSME4-201ENST00000389993 PES1O00541 588 aaKnown RBP17.81■□□□□ 0.44
PSME4-201ENST00000389993 CABP4P57796 275 aa17.81■□□□□ 0.44
PSME4-201ENST00000389993 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
PSME4-201ENST00000389993 ROCK1Q13464 1354 aa17.81■□□□□ 0.44
PSME4-201ENST00000389993 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
PSME4-201ENST00000389993 GAS2L2Q8NHY3 880 aa17.81■□□□□ 0.44
PSME4-201ENST00000389993 STAC3Q96MF2 364 aa17.8■□□□□ 0.44
PSME4-201ENST00000389993 MARCH6O60337 910 aa17.79■□□□□ 0.44
PSME4-201ENST00000389993 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
PSME4-201ENST00000389993 IL1RAPL2Q9NP60 686 aa17.79■□□□□ 0.44
PSME4-201ENST00000389993 TATP17735 454 aaPredicted RBP17.78■□□□□ 0.44
PSME4-201ENST00000389993 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
PSME4-201ENST00000389993 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
PSME4-201ENST00000389993 BTBD11A6QL63 1104 aa17.78■□□□□ 0.44
PSME4-201ENST00000389993 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
PSME4-201ENST00000389993 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
PSME4-201ENST00000389993 INTS3Q68E01 1043 aaKnown RBP17.78■□□□□ 0.44
PSME4-201ENST00000389993 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.44
PSME4-201ENST00000389993 PTCD1O75127 700 aaKnown RBP17.77■□□□□ 0.44
PSME4-201ENST00000389993 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.44
PSME4-201ENST00000389993 GPATCH8Q9UKJ3 1502 aaKnown RBP17.77■□□□□ 0.44
PSME4-201ENST00000389993 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
PSME4-201ENST00000389993 CHAF1AQ13111 956 aaPredicted RBP17.77■□□□□ 0.44
PSME4-201ENST00000389993 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
PSME4-201ENST00000389993 REC8O95072 547 aa17.77■□□□□ 0.44
PSME4-201ENST00000389993 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
PSME4-201ENST00000389993 FSD1Q9BTV5 496 aa17.77■□□□□ 0.44
PSME4-201ENST00000389993 RAPGEF6Q8TEU7 1601 aa17.77■□□□□ 0.43
PSME4-201ENST00000389993 PRDM11Q9NQV5 511 aa17.76■□□□□ 0.43
PSME4-201ENST00000389993 F6X3S4 739 aa17.76■□□□□ 0.43
PSME4-201ENST00000389993 NRDCO43847 1150 aa17.76■□□□□ 0.43
PSME4-201ENST00000389993 ADAMTS2O95450 1211 aa17.76■□□□□ 0.43
PSME4-201ENST00000389993 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
PSME4-201ENST00000389993 ATP10BO94823 1461 aa17.76■□□□□ 0.43
PSME4-201ENST00000389993 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
PSME4-201ENST00000389993 FAM135AQ9P2D6 1515 aa17.75■□□□□ 0.43
PSME4-201ENST00000389993 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
PSME4-201ENST00000389993 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
PSME4-201ENST00000389993 RUFY2Q8WXA3 655 aa17.74■□□□□ 0.43
PSME4-201ENST00000389993 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
PSME4-201ENST00000389993 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
PSME4-201ENST00000389993 SYCP2Q9BX26 1530 aa17.74■□□□□ 0.43
PSME4-201ENST00000389993 STK3Q13188 491 aa17.74■□□□□ 0.43
PSME4-201ENST00000389993 HTATSF1O43719 755 aaKnown RBP17.73■□□□□ 0.43
PSME4-201ENST00000389993 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
PSME4-201ENST00000389993 KIAA2012Q0VF49 1180 aa17.73■□□□□ 0.43
PSME4-201ENST00000389993 AKAP17AQ02040 695 aaKnown RBP17.73■□□□□ 0.43
PSME4-201ENST00000389993 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
PSME4-201ENST00000389993 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
PSME4-201ENST00000389993 GNAI2P04899 355 aa17.72■□□□□ 0.43
PSME4-201ENST00000389993 GSE1Q14687 1217 aa17.72■□□□□ 0.43
PSME4-201ENST00000389993 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
PSME4-201ENST00000389993 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
PSME4-201ENST00000389993 CDC45O75419 566 aa17.72■□□□□ 0.43
PSME4-201ENST00000389993 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
PSME4-201ENST00000389993 RRP12Q5JTH9 1297 aaKnown RBP17.72■□□□□ 0.43
PSME4-201ENST00000389993 CPLX1O14810 134 aa17.71■□□□□ 0.43
PSME4-201ENST00000389993 EXOC6BQ9Y2D4 811 aa17.71■□□□□ 0.43
PSME4-201ENST00000389993 NUP153P49790 1475 aaKnown RBP17.71■□□□□ 0.43
PSME4-201ENST00000389993 KIF6Q6ZMV9 814 aa17.71■□□□□ 0.43
PSME4-201ENST00000389993 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
PSME4-201ENST00000389993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.71■□□□□ 0.434e-14■■□□□ 11.9
PSME4-201ENST00000389993 MVPQ14764 893 aaKnown RBP17.71■□□□□ 0.43
PSME4-201ENST00000389993 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
PSME4-201ENST00000389993 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
PSME4-201ENST00000389993 SMC3Q9UQE7 1217 aa17.7■□□□□ 0.42
PSME4-201ENST00000389993 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
PSME4-201ENST00000389993 NFKBIBQ15653 356 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 CHRNA2Q15822 529 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 NEK4P51957 841 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 CLASRPQ8N2M8 674 aaKnown RBP17.69■□□□□ 0.42
PSME4-201ENST00000389993 ERC2O15083 957 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 BICD2Q8TD16 824 aa17.69■□□□□ 0.42
PSME4-201ENST00000389993 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 CFAP65Q6ZU64 1925 aaKnown RBP17.68■□□□□ 0.42
PSME4-201ENST00000389993 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
PSME4-201ENST00000389993 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 ANXA1P04083 346 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 DUSP27Q5VZP5 1158 aa17.68■□□□□ 0.42
PSME4-201ENST00000389993 CNTROBQ8N137 903 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 WASLO00401 505 aaPredicted RBP17.67■□□□□ 0.42
PSME4-201ENST00000389993 SRGAP3O43295 1099 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 TRDNQ13061 729 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 ASXL2Q76L83 1435 aa17.67■□□□□ 0.42
PSME4-201ENST00000389993 ATAD2Q6PL18 1390 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms