RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
SSC5D-201ENST00000389623 CCDC192P0DO97 292 aa22.03■■□□□ 1.12
SSC5D-201ENST00000389623 MARCH6O60337 910 aa22.03■■□□□ 1.12
SSC5D-201ENST00000389623 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
SSC5D-201ENST00000389623 GNAI2P04899 355 aa22.02■■□□□ 1.12
SSC5D-201ENST00000389623 TTC5Q8N0Z6 440 aa22.02■■□□□ 1.12
SSC5D-201ENST00000389623 TBC1D2Q9BYX2 928 aa22.02■■□□□ 1.12
SSC5D-201ENST00000389623 DAPK1P53355 1430 aa22.02■■□□□ 1.12
SSC5D-201ENST00000389623 ACBD3Q9H3P7 528 aa22.02■■□□□ 1.12
SSC5D-201ENST00000389623 AFAP1Q8N556 730 aa22.01■■□□□ 1.11
SSC5D-201ENST00000389623 FSD1Q9BTV5 496 aa22.01■■□□□ 1.11
SSC5D-201ENST00000389623 CEP89Q96ST8 783 aa22.01■■□□□ 1.11
SSC5D-201ENST00000389623 CCDC30Q5VVM6 783 aa22■■□□□ 1.11
SSC5D-201ENST00000389623 ZNF428Q96B54 188 aa22■■□□□ 1.11
SSC5D-201ENST00000389623 RALYLQ86SE5 291 aaKnown RBP22■■□□□ 1.11
SSC5D-201ENST00000389623 PCMTD1Q96MG8 357 aaPredicted RBP22■■□□□ 1.11
SSC5D-201ENST00000389623 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
SSC5D-201ENST00000389623 SAFBQ15424 915 aaKnown RBP eCLIP21.99■■□□□ 1.11
SSC5D-201ENST00000389623 PDE4CQ08493 712 aa21.99■■□□□ 1.11
SSC5D-201ENST00000389623 CCDC112Q8NEF3 446 aa21.98■■□□□ 1.11
SSC5D-201ENST00000389623 RARSP54136 660 aaKnown RBP21.98■■□□□ 1.11
SSC5D-201ENST00000389623 TMEM57Q8N5G2 664 aa21.98■■□□□ 1.11
SSC5D-201ENST00000389623 FMNL2Q96PY5 1086 aa21.98■■□□□ 1.11
SSC5D-201ENST00000389623 SLC4A2P04920 1241 aa21.97■■□□□ 1.11
SSC5D-201ENST00000389623 NFXL1Q6ZNB6 911 aa21.97■■□□□ 1.11
SSC5D-201ENST00000389623 OLFM4Q6UX06 510 aa21.97■■□□□ 1.11
SSC5D-201ENST00000389623 NOM1Q5C9Z4 860 aaKnown RBP21.97■■□□□ 1.11
SSC5D-201ENST00000389623 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
SSC5D-201ENST00000389623 KRT85P78386 507 aa21.96■■□□□ 1.11
SSC5D-201ENST00000389623 CCDC47Q96A33 483 aaKnown RBP21.96■■□□□ 1.11
SSC5D-201ENST00000389623 LRRCC1Q9C099 1032 aa21.96■■□□□ 1.11
SSC5D-201ENST00000389623 TROQ12816 1431 aaPredicted RBP21.96■■□□□ 1.11
SSC5D-201ENST00000389623 PDILTQ8N807 584 aa21.96■■□□□ 1.11
SSC5D-201ENST00000389623 SMC2O95347 1197 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 GTF2E1P29083 439 aaPredicted RBP21.95■■□□□ 1.1
SSC5D-201ENST00000389623 AEBP1Q8IUX7 1158 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 CYP46A1Q9Y6A2 500 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 NEUROD6Q96NK8 337 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 DUSP27Q5VZP5 1158 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 SYCE3A1L190 88 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 TNMDQ9H2S6 317 aa21.95■■□□□ 1.1
SSC5D-201ENST00000389623 HIP1O00291 1037 aa21.94■■□□□ 1.1
SSC5D-201ENST00000389623 CCT4P50991 539 aaKnown RBP21.94■■□□□ 1.1
SSC5D-201ENST00000389623 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
SSC5D-201ENST00000389623 RIC3Q7Z5B4 369 aa21.94■■□□□ 1.1
SSC5D-201ENST00000389623 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
SSC5D-201ENST00000389623 GAS2L2Q8NHY3 880 aa21.93■■□□□ 1.1
SSC5D-201ENST00000389623 CWC15Q9P013 229 aaKnown RBP21.93■■□□□ 1.1
SSC5D-201ENST00000389623 NKTRP30414 1462 aaKnown RBP21.93■■□□□ 1.1
SSC5D-201ENST00000389623 RPAP2Q8IXW5 612 aaPredicted RBP21.93■■□□□ 1.1
SSC5D-201ENST00000389623 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
SSC5D-201ENST00000389623 TMPOP42166 694 aaKnown RBP21.92■■□□□ 1.1
SSC5D-201ENST00000389623 CCP110O43303 1012 aa21.92■■□□□ 1.1
SSC5D-201ENST00000389623 WASHC4Q2M389 1173 aa21.91■■□□□ 1.1
SSC5D-201ENST00000389623 RUFY1Q96T51 708 aa21.91■■□□□ 1.1
SSC5D-201ENST00000389623 ARHGAP5Q13017 1502 aa21.91■■□□□ 1.1
SSC5D-201ENST00000389623 TNPO1Q92973 898 aaKnown RBP21.91■■□□□ 1.1
SSC5D-201ENST00000389623 LARP1BQ659C4 914 aaKnown RBP21.91■■□□□ 1.1
SSC5D-201ENST00000389623 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
SSC5D-201ENST00000389623 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
SSC5D-201ENST00000389623 CEBPZQ03701 1054 aaKnown RBP21.9■■□□□ 1.1
SSC5D-201ENST00000389623 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
SSC5D-201ENST00000389623 AK7Q96M32 723 aa21.9■■□□□ 1.1
SSC5D-201ENST00000389623 ZNF396Q96N95 335 aaPredicted RBP21.89■■□□□ 1.1
SSC5D-201ENST00000389623 PRAM1Q96QH2 718 aa21.89■■□□□ 1.1
SSC5D-201ENST00000389623 ERICH2A1L162 156 aa21.89■■□□□ 1.09
SSC5D-201ENST00000389623 MAP3K1Q13233 1512 aa21.89■■□□□ 1.09
SSC5D-201ENST00000389623 SULT6B1Q6IMI4 303 aa21.89■■□□□ 1.09
SSC5D-201ENST00000389623 STK38Q15208 465 aa21.88■■□□□ 1.09
SSC5D-201ENST00000389623 ANKRD1Q15327 319 aa21.88■■□□□ 1.09
SSC5D-201ENST00000389623 ERC1Q8IUD2 1116 aa21.88■■□□□ 1.09
SSC5D-201ENST00000389623 FCHSD2O94868 740 aa21.88■■□□□ 1.09
SSC5D-201ENST00000389623 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
SSC5D-201ENST00000389623 SSFA2P28290 1259 aa21.87■■□□□ 1.09
SSC5D-201ENST00000389623 DHX8Q14562 1220 aaKnown RBP21.87■■□□□ 1.09
SSC5D-201ENST00000389623 TBC1D32Q96NH3 1257 aa21.87■■□□□ 1.09
SSC5D-201ENST00000389623 PDCL3Q9H2J4 239 aa21.87■■□□□ 1.09
SSC5D-201ENST00000389623 ERCC4Q92889 916 aaPredicted RBP21.87■■□□□ 1.09
SSC5D-201ENST00000389623 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
SSC5D-201ENST00000389623 NLRP6P59044 892 aa21.86■■□□□ 1.09
SSC5D-201ENST00000389623 PDCL2Q8N4E4 241 aa21.86■■□□□ 1.09
SSC5D-201ENST00000389623 VPS53Q5VIR6 699 aa21.86■■□□□ 1.09
SSC5D-201ENST00000389623 NUP62CLQ9H1M0 184 aa21.86■■□□□ 1.09
SSC5D-201ENST00000389623 HDGFL1Q5TGJ6 251 aa21.86■■□□□ 1.09
SSC5D-201ENST00000389623 CABP1Q9NZU7 370 aa21.85■■□□□ 1.09
SSC5D-201ENST00000389623 XPCQ01831 940 aaPredicted RBP21.85■■□□□ 1.09
SSC5D-201ENST00000389623 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
SSC5D-201ENST00000389623 DHX16O60231 1041 aaKnown RBP21.84■■□□□ 1.09
SSC5D-201ENST00000389623 ME1P48163 572 aa21.83■■□□□ 1.09
SSC5D-201ENST00000389623 PSME1Q06323 249 aa21.83■■□□□ 1.09
SSC5D-201ENST00000389623 ZSCAN31Q96LW9 406 aaPredicted RBP21.83■■□□□ 1.09
SSC5D-201ENST00000389623 NSD3Q9BZ95 1437 aa21.83■■□□□ 1.09
SSC5D-201ENST00000389623 RPRD2Q5VT52 1461 aaKnown RBP21.83■■□□□ 1.09
SSC5D-201ENST00000389623 STK3Q13188 491 aa21.83■■□□□ 1.08
SSC5D-201ENST00000389623 BLOC1S2Q6QNY1 142 aa21.83■■□□□ 1.08
SSC5D-201ENST00000389623 FILIP1Q7Z7B0 1213 aa21.83■■□□□ 1.08
SSC5D-201ENST00000389623 SPATA32Q96LK8 384 aa21.83■■□□□ 1.08
SSC5D-201ENST00000389623 DNAJC2Q99543 621 aaKnown RBP21.83■■□□□ 1.08
SSC5D-201ENST00000389623 HECW1Q76N89 1606 aa21.83■■□□□ 1.08
SSC5D-201ENST00000389623 IGHDP01880 384 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms