RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 NKTRP30414 1462 aaKnown RBP9.61□□□□□ -0.87
NCBP3-201ENST00000389005 TRIM29Q14134 588 aa9.6□□□□□ -0.87
NCBP3-201ENST00000389005 TBC1D2Q9BYX2 928 aa9.6□□□□□ -0.87
NCBP3-201ENST00000389005 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
NCBP3-201ENST00000389005 WDR33Q9C0J8 1336 aaKnown RBP9.6□□□□□ -0.87
NCBP3-201ENST00000389005 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
NCBP3-201ENST00000389005 ZSCAN30Q86W11 494 aa9.6□□□□□ -0.87
NCBP3-201ENST00000389005 SDF4Q9BRK5 362 aa9.6□□□□□ -0.87
NCBP3-201ENST00000389005 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
NCBP3-201ENST00000389005 HOOK1Q9UJC3 728 aaKnown RBP9.6□□□□□ -0.87
NCBP3-201ENST00000389005 PSMA5P28066 241 aa9.6□□□□□ -0.87
NCBP3-201ENST00000389005 UQCRHLA0A096LP55 91 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 UQCRHP07919 91 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 GNAI2P04899 355 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 RARSP54136 660 aaKnown RBP9.59□□□□□ -0.87
NCBP3-201ENST00000389005 DUSP27Q5VZP5 1158 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 MPNDQ8N594 471 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 TMEM57Q8N5G2 664 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 ZNF428Q96B54 188 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 IPO7O95373 1038 aaKnown RBP9.59□□□□□ -0.87
NCBP3-201ENST00000389005 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
NCBP3-201ENST00000389005 CCDC70Q6NSX1 233 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 FSD1Q9BTV5 496 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 TRDNQ13061 729 aa9.59□□□□□ -0.87
NCBP3-201ENST00000389005 ANKRD20A12PQ8NF67 263 aa9.59□□□□□ -0.88
NCBP3-201ENST00000389005 ABCC5O15440 1437 aa9.58□□□□□ -0.88
NCBP3-201ENST00000389005 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
NCBP3-201ENST00000389005 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
NCBP3-201ENST00000389005 CCDC30Q5VVM6 783 aa9.58□□□□□ -0.88
NCBP3-201ENST00000389005 BCL11BQ9C0K0 894 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-201ENST00000389005 KINO60870 393 aaKnown RBP9.58□□□□□ -0.88
NCBP3-201ENST00000389005 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
NCBP3-201ENST00000389005 NSD3Q9BZ95 1437 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 SLC4A2P04920 1241 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 APPP05067 770 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 CCT4P50991 539 aaKnown RBP9.57□□□□□ -0.88
NCBP3-201ENST00000389005 PRAM1Q96QH2 718 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 DNMBPQ6XZF7 1577 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 SPC24Q8NBT2 197 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 ABCA10Q8WWZ4 1543 aa9.57□□□□□ -0.88
NCBP3-201ENST00000389005 NESP48681 1621 aa9.56□□□□□ -0.88
NCBP3-201ENST00000389005 SSH1Q8WYL5 1049 aa9.56□□□□□ -0.88
NCBP3-201ENST00000389005 RALYLQ86SE5 291 aaKnown RBP9.56□□□□□ -0.88
NCBP3-201ENST00000389005 CAMSAP2Q08AD1 1489 aa9.56□□□□□ -0.88
NCBP3-201ENST00000389005 NFXL1Q6ZNB6 911 aa9.56□□□□□ -0.88
NCBP3-201ENST00000389005 SETQ01105 290 aaPredicted RBP9.56□□□□□ -0.88
NCBP3-201ENST00000389005 LRRCC1Q9C099 1032 aa9.56□□□□□ -0.88
NCBP3-201ENST00000389005 HIP1O00291 1037 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 AEBP1Q8IUX7 1158 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 SYCE3A1L190 88 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
NCBP3-201ENST00000389005 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 FCHSD2O94868 740 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 TNPO1Q92973 898 aaKnown RBP9.55□□□□□ -0.88
NCBP3-201ENST00000389005 GPRASP1Q5JY77 1395 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 CCDC112Q8NEF3 446 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 TBC1D32Q96NH3 1257 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 SMC2O95347 1197 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 SRCIN1Q9C0H9 1055 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 CCDC66A2RUB6 948 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 MARCH6O60337 910 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
NCBP3-201ENST00000389005 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 TNMDQ9H2S6 317 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 CYP46A1Q9Y6A2 500 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 KRT85P78386 507 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
NCBP3-201ENST00000389005 HSP90B2PQ58FF3 399 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
NCBP3-201ENST00000389005 NEUROD6Q96NK8 337 aa9.54□□□□□ -0.88
NCBP3-201ENST00000389005 ERC1Q8IUD2 1116 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 ABCC11Q96J66 1382 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 CCDC141Q6ZP82 1450 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 NLRP6P59044 892 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 CDK19Q9BWU1 502 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 IQGAP2Q13576 1575 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 SSFA2P28290 1259 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 ATAD2Q6PL18 1390 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 CCP110O43303 1012 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
NCBP3-201ENST00000389005 ZNF396Q96N95 335 aaPredicted RBP9.53□□□□□ -0.88
NCBP3-201ENST00000389005 CUL7Q14999 1698 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 PCMTD1Q96MG8 357 aaPredicted RBP9.53□□□□□ -0.88
NCBP3-201ENST00000389005 RPAP2Q8IXW5 612 aaPredicted RBP9.53□□□□□ -0.88
NCBP3-201ENST00000389005 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
NCBP3-201ENST00000389005 PDILTQ8N807 584 aa9.52□□□□□ -0.88
NCBP3-201ENST00000389005 WASHC4Q2M389 1173 aa9.52□□□□□ -0.88
NCBP3-201ENST00000389005 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.88
NCBP3-201ENST00000389005 FMNL2Q96PY5 1086 aa9.52□□□□□ -0.89
NCBP3-201ENST00000389005 PDE4CQ08493 712 aa9.52□□□□□ -0.89
NCBP3-201ENST00000389005 LARP1BQ659C4 914 aaKnown RBP9.52□□□□□ -0.89
NCBP3-201ENST00000389005 PSME1Q06323 249 aa9.52□□□□□ -0.89
NCBP3-201ENST00000389005 KIAA0586Q9BVV6 1533 aa9.52□□□□□ -0.89
NCBP3-201ENST00000389005 CEBPZQ03701 1054 aaKnown RBP9.52□□□□□ -0.89
NCBP3-201ENST00000389005 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.89
NCBP3-201ENST00000389005 CCDC47Q96A33 483 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms