RNA–Protein interactions for RNA: ENST00000384610.1

RNVU1-1-201, Transcript of RNA, variant U1 small nuclear 1, humanhuman

BASIC

Gene RNVU1-1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-1-201ENST00000384610 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
RNVU1-1-201ENST00000384610 C1orf167Q5SNV9 1468 aa13.16□□□□□ -0.3
RNVU1-1-201ENST00000384610 USP54Q70EL1 1684 aa13.15□□□□□ -0.3
RNVU1-1-201ENST00000384610 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
RNVU1-1-201ENST00000384610 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.31
RNVU1-1-201ENST00000384610 MST1RQ04912 1400 aa13.14□□□□□ -0.31
RNVU1-1-201ENST00000384610 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
RNVU1-1-201ENST00000384610 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
RNVU1-1-201ENST00000384610 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
RNVU1-1-201ENST00000384610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
RNVU1-1-201ENST00000384610 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
RNVU1-1-201ENST00000384610 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
RNVU1-1-201ENST00000384610 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
RNVU1-1-201ENST00000384610 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
RNVU1-1-201ENST00000384610 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
RNVU1-1-201ENST00000384610 PSME1Q06323 249 aa13.12□□□□□ -0.31
RNVU1-1-201ENST00000384610 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
RNVU1-1-201ENST00000384610 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
RNVU1-1-201ENST00000384610 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
RNVU1-1-201ENST00000384610 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
RNVU1-1-201ENST00000384610 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
RNVU1-1-201ENST00000384610 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
RNVU1-1-201ENST00000384610 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
RNVU1-1-201ENST00000384610 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
RNVU1-1-201ENST00000384610 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
RNVU1-1-201ENST00000384610 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
RNVU1-1-201ENST00000384610 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
RNVU1-1-201ENST00000384610 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
RNVU1-1-201ENST00000384610 MTHFSP49914 203 aa13.09□□□□□ -0.31
RNVU1-1-201ENST00000384610 NME9Q86XW9 330 aa13.09□□□□□ -0.31
RNVU1-1-201ENST00000384610 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
RNVU1-1-201ENST00000384610 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
RNVU1-1-201ENST00000384610 PIK3C2AO00443 1686 aa13.08□□□□□ -0.31
RNVU1-1-201ENST00000384610 SBNO1A3KN83 1393 aa13.08□□□□□ -0.31
RNVU1-1-201ENST00000384610 HNRNPUQ00839 825 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNVU1-1-201ENST00000384610 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
RNVU1-1-201ENST00000384610 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
RNVU1-1-201ENST00000384610 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
RNVU1-1-201ENST00000384610 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
RNVU1-1-201ENST00000384610 ABTB2Q8N961 1025 aa13.06□□□□□ -0.32
RNVU1-1-201ENST00000384610 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
RNVU1-1-201ENST00000384610 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 NLRP6P59044 892 aa13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 ORAI2Q96SN7 254 aa13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 SLAIN2Q9P270 581 aa13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
RNVU1-1-201ENST00000384610 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 FOXO3O43524 673 aa13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
RNVU1-1-201ENST00000384610 FLT4P35916 1363 aa13.03□□□□□ -0.32
RNVU1-1-201ENST00000384610 SLIT3O75094 1523 aa13.03□□□□□ -0.32
RNVU1-1-201ENST00000384610 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
RNVU1-1-201ENST00000384610 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.33
RNVU1-1-201ENST00000384610 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.33
RNVU1-1-201ENST00000384610 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.33
RNVU1-1-201ENST00000384610 ALS2Q96Q42 1657 aa13.02□□□□□ -0.33
RNVU1-1-201ENST00000384610 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.33
RNVU1-1-201ENST00000384610 NEFMP07197 916 aa13.01□□□□□ -0.33
RNVU1-1-201ENST00000384610 BRINP3Q76B58 766 aa13.01□□□□□ -0.33
RNVU1-1-201ENST00000384610 PXDNQ92626 1479 aa13.01□□□□□ -0.33
RNVU1-1-201ENST00000384610 ABCC6O95255 1503 aa13.01□□□□□ -0.33
RNVU1-1-201ENST00000384610 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
RNVU1-1-201ENST00000384610 MARF1Q9Y4F3 1742 aaKnown RBP13□□□□□ -0.33
RNVU1-1-201ENST00000384610 USP19O94966 1318 aa13□□□□□ -0.33
RNVU1-1-201ENST00000384610 NHSL1Q5SYE7 1610 aa12.99□□□□□ -0.33
RNVU1-1-201ENST00000384610 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
RNVU1-1-201ENST00000384610 NFAT5O94916 1531 aa12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 PPM1GO15355 546 aaPredicted RBP12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 FCHSD2O94868 740 aa12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
RNVU1-1-201ENST00000384610 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
RNVU1-1-201ENST00000384610 SPATA31A3Q5VYP0 1347 aa12.97□□□□□ -0.33
RNVU1-1-201ENST00000384610 AMPHP49418 695 aa12.97□□□□□ -0.33
RNVU1-1-201ENST00000384610 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
RNVU1-1-201ENST00000384610 AHDC1Q5TGY3 1603 aaPredicted RBP12.96□□□□□ -0.33
RNVU1-1-201ENST00000384610 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
RNVU1-1-201ENST00000384610 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
RNVU1-1-201ENST00000384610 TOM1O60784 492 aa12.96□□□□□ -0.33
RNVU1-1-201ENST00000384610 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
RNVU1-1-201ENST00000384610 GCP02774 474 aa12.95□□□□□ -0.34
RNVU1-1-201ENST00000384610 IL13P35225 146 aa12.95□□□□□ -0.34
RNVU1-1-201ENST00000384610 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
RNVU1-1-201ENST00000384610 LTN1O94822 1766 aa12.94□□□□□ -0.34
RNVU1-1-201ENST00000384610 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
RNVU1-1-201ENST00000384610 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
RNVU1-1-201ENST00000384610 IP6K1Q92551 441 aa12.93□□□□□ -0.34
RNVU1-1-201ENST00000384610 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
RNVU1-1-201ENST00000384610 CPDO75976 1380 aa12.93□□□□□ -0.34
RNVU1-1-201ENST00000384610 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
RNVU1-1-201ENST00000384610 HOXC9P31274 260 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms